Elif Karagöz
@gekaragoz.bsky.social
📤 405
📥 642
📝 19
Group leader at Max Perutz Labs interested in protein quality control
reposted by
Elif Karagöz
Kristina Stapornwongkul
about 23 hours ago
Join our vibrant scientific community
@viennabiocenter.bsky.social
! It’s an extremely supportive environment to start a lab 🚀
www.imp.ac.at/career/open-...
add a skeleton here at some point
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Elif Karagöz
Buzz Baum
4 days ago
We have wondered what a complex archaeal cell might look like ever since 2014. It’s been a long road (and the journey is far from over), but it’s a good time to pause for breath and look. These Asgard archaeal cells are a surprise! And that is the joy of being a cell biologist.
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Elif Karagöz
Institute of Molecular Biotechnology
5 days ago
New paper alert! Scientists in Julius Brennecke’s lab at IMBA and Clemens Plaschka’s lab at
@impvienna.bsky.social
solved a decade-old puzzle, uncovering how the information molecule mRNA travels from the cell’s nucleus to its periphery. More:
https://imba.science/3Xl2hJ3
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reposted by
Elif Karagöz
Max Perutz Labs Vienna
5 days ago
Big news! Group leader Sascha Martens has been awarded a prestigious
@erc.europa.eu
Synergy Grant for the collaborative project DegrAbility to explore how cells can better recycle harmful protein aggregates linked to diseases like Alzheimer’s ➡️
tinyurl.com/2zuz9jcf
@univie.ac.at
@meduniwien.ac.at
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reposted by
Elif Karagöz
Max Perutz Labs Vienna
6 days ago
📢 Open Call! The Max Perutz Labs invite applications for a Tenure-Track Professorship in Genome Biology. We are particularly interested in researchers investigating the molecular and biophysical mechanisms underlying genome function and regulation. More details ➡️
tinyurl.com/3t7vvdct
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Elif Karagöz
Yasin Dagdas
11 days ago
This Halloween, we have a spooky evolutionary story for you. The brainchild of
@delaconcepcionjc.bsky.social
, Nick Irwin and our fantastic collaborators is now out in
@natplants.nature.com
www.nature.com/articles/s41...
Here’s why I love this work — and why I think you’ll enjoy it too. 👇
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reposted by
Elif Karagöz
Omaya Dudin 𓂆 ¦🍉¦🦠¦🔬¦
11 days ago
🚨Our collaboration with
@centriolelab.bsky.social
&
@gautamdey.bsky.social
is out today in
@cp-cell.bsky.social
We show that
#Expansion
#Microscopy
is a broad-spectrum modality for Euks, enabling 3D phenotypic maps rooted to phylogeny.
#ProtistsOnSky
#SciComm
#SciSky
www.cell.com/cell/fulltex...
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Elif Karagöz
Elias Adriaenssens
11 days ago
Our latest review is now online! 👇
@martenslab.bsky.social
Mechanism of autophagy initiation by transmembrane selective autophagy receptors | The EMBO Journal
www.embopress.org/doi/full/10....
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Mechanism of autophagy initiation by transmembrane selective autophagy receptors | The EMBO Journal
EMBO Press is an editorially independent publishing platform for the development of EMBO scientific publications.
https://www.embopress.org/doi/full/10.1038/s44318-025-00615-w
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reposted by
Elif Karagöz
Max Perutz Labs Vienna
11 days ago
📢 Open Call! The Max Perutz Labs invite applications for a Full Professorship in Integrative Structure Biology with a focus on in situ structural biology using cryo-electron tomography (cryo-ET) and related methods. More details ➡️
tinyurl.com/brswbymu
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reposted by
Elif Karagöz
GBM (Gesellschaft für Biochemie und Molekularbiologie)
15 days ago
🎉 Huge congrats to Maya Schuldiner from the Weizmann Institute (Israel) for the 🏅 Otto Warburg Medal 2026! Her work on how proteins find their way to organelles and how these organelles talk to each other has reshaped how we think about cells 🧬✨
#OWM
#WeizmannInstitute
@elsevierconnect.bsky.social
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reposted by
Elif Karagöz
Holthuis Lab
17 days ago
Proud to share a preprint of our paper on how bridge-like lipid transport protein VPS13C senses lysosomal membrane tension in anticipation of membrane lesions to initiate net ER-to-lysosome lipid transfer for efficient lysosomal repair
www.biorxiv.org/content/10.1...
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VPS13C/PARK23 initiates lipid transfer and membrane remodeling for efficient lysosomal repair
Perturbations in lysosome integrity are tightly linked to neurological disorders and ageing, but the underlying pathogenic mechanisms are incompletely understood. Using an unbiased proteomic approach,...
https://www.biorxiv.org/content/10.1101/2025.10.23.684214v1
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reposted by
Elif Karagöz
David Teis
22 days ago
Quiescent cells stay alive by eating less. They downregulate amino acid transporters to match reduced demand. When this brake fails -> cell death & disease. More info in our new paper 👇
add a skeleton here at some point
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reposted by
Elif Karagöz
Oded Rechavi
27 days ago
BIG ANNOUNCEMENT📣: I haven’t been this excited to be part of something new in 15 years… Thrilled to reveal the passion project I’ve been working on for the past year and a half!🙀🥳 (thread 👇)
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Elif Karagöz
Kathrin Lang
26 days ago
🚨Our paper is out! 🥳 Hijacking a bacterial ABC transporter for efficient genetic code expansion. Many congrats to everyone involved - a multi-year effort led by
@taruniype.bsky.social
@maxfottner.bsky.social
www.nature.com/articles/s41...
it all started years ago with a failed experiment 🧵👇 1/9
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Hijacking a bacterial ABC transporter for genetic code expansion - Nature
Bacterial ATP-binding cassette (ABC) transporters can be utilized and engineered to transport non-canonical amino acids into Escherichia coli for highly efficient synthesis of proteins with novel func...
https://www.nature.com/articles/s41586-025-09576-w
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reposted by
Elif Karagöz
Max Perutz Labs Vienna
26 days ago
RNA biology is a major research focus at the Perutz - and the new
@fwf-at.bsky.social
grants strengthen it even further 🙌 Elif Karagöz and Pavel Kovarik will investigate how RNA-binding proteins regulate cellular stress and immune responses ➡️
tinyurl.com/2s3f3mu8
@univie.ac.at
@meduniwien.ac.at
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reposted by
Elif Karagöz
Kresten Lindorff-Larsen
about 1 month ago
A good day to remember John Gurdon’s school report from his biology master at Eton
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reposted by
Elif Karagöz
Susan Shao
about 1 month ago
Beautiful reconstitution of amino acid stress-dependent ISR activation by my
@harvardcellbio.bsky.social
colleagues presenting a unifying mechanism for GCN2 activation, which requires ribosome collisions and is enhanced by cognate uncharged tRNA in the A site!
www.science.org/doi/10.1126/...
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GCN1 couples GCN2 to ribosomal state to initiate amino acid response pathway signaling
During nutrient deprivation, activation of the protein kinase GCN2 regulates cell survival and metabolic homeostasis. In addition to amino acid stress, GCN2 is activated by a variety of cellular stres...
https://www.science.org/doi/10.1126/science.ads8728
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reposted by
Elif Karagöz
John Ngo
about 2 months ago
🚀 Our new paper is out
@natmethods.nature.com
! Kuffer & Marzilli engineered conditionally stable MS2 & PP7 coat proteins (dMCP & dPCP) that degrade unless bound to RNA, enabling ultra–low-background, single-mRNA imaging in live cells. 🔗
www.nature.com/articles/s41...
🧬
www.addgene.org/John_Ngo/
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reposted by
Elif Karagöz
Laura Lorenzo Orts
about 2 months ago
I am excited to announce that I will be moving to IMB Mainz next year! The Winter call for the IPP PhD program is now open; if you are interested in maternal
#mRNA
regulation and
#translation
in early vertebrate development, please apply! Deadline: 16 October. More info:
www.imb.de/students-pos...
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Laura Lorenzo Orts
IMB Mainz
https://www.imb.de/students-postdocs/international-phd-programme/apply-to-ipp/projects-offered/laura-lorenzo-orts
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reposted by
Elif Karagöz
Itay Budin
about 2 months ago
Very excited to share new work out today in
@natchembio.nature.com
on a new approach - FACES - for selectively imaging of phospholipids and other biomolecules at spatial resolutions down to individual membrane leaflets (1/n)
www.nature.com/articles/s41...
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Leaflet-specific phospholipid imaging using genetically encoded proximity sensors - Nature Chemical Biology
An approach combining bioorthogonal chemistry with genetically encoded fluorogen-activating proteins enables subcellular imaging of phospholipids and glycans, as well as the visualization of lipid tra...
https://www.nature.com/articles/s41589-025-02021-z
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reposted by
Elif Karagöz
Max Perutz Labs Vienna
2 months ago
Opportunity for skilled hands and sharp minds - at any career stage! 💪 The Köhler Lab is seeking a full-time lab technician to support their research on nuclear envelope biology, chromatin regulation, and cellular stress resilience - apply here ➡️
tinyurl.com/bdfy3w2h
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reposted by
Elif Karagöz
Olivia Coleman
2 months ago
Thank you for including our Paper as a highlight! for anyone interested in the accompanying blog post:
go.nature.com/4mFNYdb
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Unravelling how the stress sensor ATF6 stirs up trouble (and tumors)
https://go.nature.com/4mFNYdb
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reposted by
Elif Karagöz
Karolin Luger
2 months ago
Fantastic opportunity. Vienna rocks!
add a skeleton here at some point
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reposted by
Elif Karagöz
Luisa Cochella
2 months ago
Our work on the function of miR-51/miR-100 is out! miR-100 is widely conserved across eumetazoans but its function has been mysterious. Emilio Santillán found in worms it regulates signaling and extracellular matrix genes, some of which seem to be conserved targets!
www.science.org/doi/10.1126/...
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An ancient and essential miRNA family controls cellular interaction pathways in C. elegans
A microRNA that arose at the origin of eumetazoans regulates cell adhesion and signaling in C. elegans through conserved targets.
https://www.science.org/doi/10.1126/sciadv.adz1934
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Elif Karagöz
Martin Loose
2 months ago
We are looking for a Master’s student to join a project on in vitro reconstitution of signaling networks in pathogen–host interactions: combine protein biochemistry, fluorescence microscopy & image analysis. Deadline: September 15. Find out more and apply here:
ist.ac.at/en/job/maste...
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Master Thesis Position – Loose Research Group
Our Group The Loose lab at the Institute of Science and Technology Austria (ISTA) is looking for a highly motivated Master student to join our research on the in vitro reconstitution of signaling n...
https://ist.ac.at/en/job/master-thesis-position-loose-research-group/
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reposted by
Elif Karagöz
Nature Cell Biology
2 months ago
💫NEW: Mauthe et al. find that protein aggregate clearance requires fragmentation of the aggregate by a chaperone module and a proteasomal regulatory particle for recruitment and clustering of selective
#autophagy
receptors to initiate phagophore formation.
bit.ly/3JJeJPp
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A chaperone-proteasome-based fragmentation machinery is essential for aggrephagy - Nature Cell Biology
Mauthe et al. find that protein aggregate clearance requires fragmentation of the aggregate by a chaperone module and a proteasomal regulatory particle for recruitment and clustering of selective auto...
https://bit.ly/3JJeJPp
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reposted by
Elif Karagöz
Dan Grabarczyk
2 months ago
Glad to share the final version of our story about the UBR4 complex, an E4 ligase protein quality control hub
@science.org
. Now with more cryo-EM structures and a deeper dive into substrate recognition, especially escaped mitochondrial proteins
@clausenlab.bsky.social
www.science.org/doi/10.1126/...
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Elif Karagöz
Dan Grabarczyk
3 months ago
Happy to share our work on the structure and function of the unusual E3 ligase ZNFX1
@cp-cell.bsky.social
. It uses a nucleic acid-activated transthiolation mechanism, ubiquitinating and clustering RNA to protect cells in an immune response.
@clausenlab.bsky.social
www.cell.com/cell/fulltex...
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A split-site E3 ligase mechanism enables ZNFX1 to ubiquitinate and cluster single-stranded RNA into ubiquitin-coated nucleoprotein particles
Grabarczyk et al. show the structure and mechanism of a non-canonical ubiquitin ligase, which is activated through nucleic-acid-induced oligomerization and is critical for cell survival during immune ...
https://www.cell.com/cell/fulltext/S0092-8674%2825%2900920-1
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reposted by
Elif Karagöz
3 months ago
📢 New preprint: Aromatic Ring Flips Reveal Reshaping of Protein Dynamics in Crystals and Complexes. We addressed a long-standing question that people debated already in the 1970s - but it still remained open: Do proteins in crystals move as they do in solution? We used ring flips to find out. 1/n
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Exciting new work from Dagdas lab! Congrats to Alibek and all the team!
add a skeleton here at some point
3 months ago
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reposted by
Elif Karagöz
Carolin Klose
3 months ago
Excited to share our latest study in
@natcomms.nature.com
, where we characterize the chaperone function of the ER membrane protein complex (EMC)—supporting membrane protein biogenesis beyond insertion! 1/9
www.nature.com/articles/s41...
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The EMC acts as a chaperone for membrane proteins - Nature Communications
Membrane proteins are essential for any cell but difficult to fold. Here, the authors show that the EMC acts as a chaperone for membrane proteins. They dissect client recognition and provide a molecul...
https://www.nature.com/articles/s41467-025-62109-x#article-info
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reposted by
Elif Karagöz
Christa Buecker
4 months ago
My colleagues are awesome!
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Elif Karagöz
Marco Hein
4 months ago
Join us at the Perutz, part of the Vienna Biocenter! Opening for a full professorship in Molecular Mechanisms of Disease 👇🏻
@maxperutzlabs.bsky.social
@viennabiocenter.bsky.social
@univie.ac.at
add a skeleton here at some point
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reposted by
Elif Karagöz
Max Perutz Labs Vienna
4 months ago
📢 Open Call! The Max Perutz Labs invite applications for a Full Professorship in Molecular Mechanisms of Disease. More information ➡️
tinyurl.com/3yn883b8
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Elif Karagöz
SFB Targeted Protein Degradation
4 months ago
👏 Big CONGRATS to
@sramundo.bsky.social
for receiving an FWF
@fwf-at.bsky.social
ASTRA Award 🌠✨ See all about it 👇
add a skeleton here at some point
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3
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reposted by
Elif Karagöz
Cristian Prieto-Garcia
12 months ago
It is finally out! My first Science paper is online and it does not seem real😃. I am Incredibly happy! Really thanks to all my coauthors and special mention to my incredible supervisor Ivan Dikic for all the support and trust ! 🫶.
#RNA
#Proteostasis
#ubiquitin
#autophagy
#RP
doi.org/10.1126/scie...
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Pathogenic proteotoxicity of cryptic splicing is alleviated by ubiquitination and ER-phagy
RNA splicing enables the functional adaptation of cells to changing contexts. Impaired splicing has been associated with diseases, including retinitis pigmentosa, but the underlying molecular mechanis...
https://doi.org/10.1126/science.adi5295
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Elif Karagöz
Petr Svoboda
5 months ago
#TCTeAC
... what's more than organizing one conference? Two conferences! This one is more Day Science on biology of Argonaute proteins from prokaryotes to Metazoa. Great line up of invited speakers. Some special fun included!
add a skeleton here at some point
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reposted by
Elif Karagöz
Saarikangas lab
5 months ago
Last call to apply for the Susan Lindquist School on Proteostasis EMBO-FEBS Lecture Course, 16-19 Sept 2025 in Espoo, Finland! Open for postdocs and PhD students. DL June 15!
meetings.embo.org/event/25-pro...
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Elif Karagöz
Alper Akay
5 months ago
Are you interested in doing a masters in RNA biology? We are accepting students for 2-years masters by research degree (1 year research, 1 year write up). Only 1 year tuition fees (£25k international, £5k home) fees include bench fees normally worth £4k.
@biouea.bsky.social
www.theakaylab.com
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RNA (epi)genetics and germline development
https://www.theakaylab.com
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Elif Karagöz
The EMBO Journal
5 months ago
REFEREE 1: “I conclude with a simple, direct statement - this is the best paper I have read all year!”
#TransparentPeerReview
Co-evolving infectivity and expression patterns drive the diversification of endogenous retroviruses
@juliusbrennecke.bsky.social
et al
www.embopress.org/doi/full/10....
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Elif Karagöz
Eva Schmid
5 months ago
📣 Our new VIP3 Postdoc program is accepting applications! Wondering what's it's like to do a postdoc at the Vienna Biocenter? Find out here👇 🎉
add a skeleton here at some point
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reposted by
Elif Karagöz
MedUni Wien
6 months ago
Innovative Forschung zur Entstehung & Kontrolle von #Metastasen ⤵️ Wir gratulieren
@jwinkler.bsky.social
von der #MedUniWien zur Auszeichnung der
@oeaw.bsky.social
#Metastasen
#MedUniWien
it dem Johann Wilhelm Ritter von Mannagetta-Preis!
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Juliane Winkler mit dem Johann Wilhelm Ritter von Mannagetta-Preis ausgezeichnet
Mehr über die Studie zur Entstehung von Metastasen!
https://www.meduniwien.ac.at/web/ueber-uns/news/2025/news-im-mai-2025/juliane-winkler-mit-dem-johann-wilhelm-ritter-von-mannagetta-preis-ausgezeichnet/
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Elif Karagöz
Cahir O'Kane
6 months ago
ER needs ATP for processes like protein quality control, but can't make its own. Here, how ATP is imported into the ER lumen and exchanged for ADP.
add a skeleton here at some point
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reposted by
Elif Karagöz
Stowers Institute
6 months ago
Finding faulty ribosomes: A new collaboration from the
@kkostova.bsky.social
Lab uncovers how cells cope with defective
#ribosomes
published in
@cp-molcell.bsky.social
. This could shed light on how failure to clear such ribosomes can lead to disease. Read more:
bit.ly/3SlXxQZ
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Elif Karagöz
Haselbach Lab
7 months ago
We are looking for PhD students using time resolved cryoEM or cryoET on topics of the ubiquitin proteasome system, fertility and immunity. However, there is freedom to shape projects in own ways.
add a skeleton here at some point
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Check out our new preprint, in which brilliant
@alessandrick.bsky.social
revealed a novel function of the RNA-binding protein IGF2BP3 in regulating the unfolded protein response. Please see the wonderful thread by
@alessandrick.bsky.social
for more detail!
www.biorxiv.org/content/10.1...
add a skeleton here at some point
7 months ago
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Elif Karagöz
Clausen Lab
7 months ago
Ubiquitin & Friends Fiesta in Vienna 2025 -- Final Call despite these challenging times for science, we look forward to gather for a lively meeting and share the joy of discovery. to join an exciting program and connect with fellow ubiquitinists sign up at
www.protein-degradation.org/symposium/
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Elif Karagöz
Institute of Molecular Biotechnology
8 months ago
IMBA is recruiting a Junior Group Leader! Are you interested in starting your own lab, pursuing curiosity-driven basic research in the life sciences? Apply now to our group leader position. The deadline is May 28. Link is below.
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Elif Karagöz
Micha Rapé Lab
8 months ago
Amazing story from
#MolecularTherapeutics
faculty
@robzonculab.bsky.social
with lead author
@aakritijain.bsky.social
describing membrane protein degradation in the lysosome. Congratulations!!
www.science.org/doi/10.1126/...
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Leucine aminopeptidase LyLAP enables lysosomal degradation of membrane proteins
Breakdown of every transmembrane protein trafficked to lysosomes requires proteolysis of their hydrophobic helical transmembrane domains. Combining lysosomal proteomics with functional genomic dataset...
https://www.science.org/doi/10.1126/science.adq8331
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