Elif Karagöz
@gekaragoz.bsky.social
📤 545
📥 755
📝 37
Group leader at Max Perutz Labs interested in protein quality control
reposted by
Elif Karagöz
The New Yorker
1 day ago
In Wilmington, North Carolina, in 1898, a white mob murdered Black men in the street and overthrew the city’s democratically elected biracial government. North Carolina would not elect another Black person to Congress until 1992.
newyorkermag.visitlink.me/cRGMCD
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The Intimate Legacies of a White-Supremacist Coup
A racist takeover in Wilmington, North Carolina, in 1898, has reverberated across generations as a reminder of American democracy’s terrifying vulnerability.
https://newyorkermag.visitlink.me/cRGMCD
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Elif Karagöz
Holthuis Lab
5 days ago
📯 Our paper “VPS13C/PARK23 initiates lipid transfer and membrane remodeling for efficient lysosomal repair” out now in Nature Communications
rdcu.be/frKmN
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VPS13C/PARK23 initiates lipid transfer and membrane remodeling for efficient lysosomal repair
Nature Communications - Not all components of the lysosome damage response pathway have been defined. Here, the authors discover that the bridge-like lipid transport protein VPS13C senses lysosomal...
https://rdcu.be/frKmN
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Elif Karagöz
Emre Yaksi
5 days ago
I am excited to announce the latest paper from our lab, published in Science ! In this study, we show that thalamocortical-like circuits in the zebrafish brain process sensory information hierarchically across topographically organized forebrain circuits.
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Elif Karagöz
Mikko Taipale
8 days ago
Our evil ORFeome paper is out! In collaboration with
@alex-stark.bsky.social
, we screened ~4,000 viral proteins and secreted effectors from bacteria and parasites, covering hundreds of diverse pathogens, for phenotypes in human cells.
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Elif Karagöz
Ran Blekhman
11 days ago
I wanted to like QED's new 1% preprint ranking. I really did. But the more I looked at the data, the more uncomfortable it made me. Here is my full peer review.
open.substack.com/pub/blekhman...
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My Peer Review of The 1%
I wanted to like QED's new 1% ranking. I don't.
https://open.substack.com/pub/blekhman/p/my-peer-review-of-the-1?r=ptsy3&utm_campaign=post-expanded-share&utm_medium=web
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Elif Karagöz
Stella Hurtley
12 days ago
Take a look at this new paper in
@science.org
Reversible suppression of autophagy in a mouse model reveals neuronal resilience | Science
www.science.org/doi/10.1126/...
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Reversible suppression of autophagy in a mouse model reveals neuronal resilience
Impairments in intracellular quality-control mechanisms, including autophagy, affect neuronal integrity and function. Despite numerous studies aimed at slowing neuronal deterioration, it remains uncle...
https://www.science.org/doi/10.1126/science.ady3911
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Elif Karagöz
Max Perutz Labs Vienna
12 days ago
🆕 publication! How do cells build their molecular machines? Tsimafei Navalayeu (Ameres lab) in
@embojournal.org
maps the stepwise assembly of the RNA exosome in mammalian cells, revealing the quality control mechanisms that ensure this essential complex is built correctly ➡️
tinyurl.com/84c2298e
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Elif Karagöz
13 days ago
In our latest paper in
@natchem.nature.com
, we reported how the crystalline environment alters protein dynamics. If you want to get the big picture quickly, have a look at the News & Views article by Lars Schäfer.
www.nature.com/articles/s41...
@istaresearch.bsky.social
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Molecular neighbours reshape protein dynamics - Nature Chemistry
As proteins are dynamic molecular machines, to fully understand their functions we need to understand how they move. Now, nuclear magnetic resonance spectroscopy and molecular dynamics simulations rev...
https://www.nature.com/articles/s41557-026-02194-7
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Elif Karagöz
Itai Yanai
14 days ago
🔥 Published today, and just in time for summer conferences, here are your guidelines for presenting badly
www.nature.com/articles/s41...
rdcu.be/fqa92
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Elif Karagöz
Kresten Lindorff-Larsen
14 days ago
Come join the new Novo Nordisk Foundation Center for Protein Design as a group leader Cool science in a great scientific environment in wonderful and very family friendly Copenhagen There are two positions that can either be at TT assistant or associate prof level
employment.ku.dk/tenure-track...
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Tenure-track Assistant Professor or Associate Professor of De novo Protein Design
The Novo Nordisk Foundation Center for Protein Design at the University of Copenhagen seeks to appoint two new group leaders in de novo protein design from 1 February 2027 or as soon as possible thereafter. These positions will be at the Assistant or Associate Professor level and associated with the Department of Biology (Faculty of Science) or the Department of Drug Design and Pharmacology (Faculty of Health and Medical Sciences).
https://employment.ku.dk/tenure-track/?show=163355
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Elif Karagöz
Rhineland RNA Club
15 days ago
Ina
@inahuppertz.bsky.social
and Kathrin
@katleppek.bsky.social
cordially invite all RNA enthusiasts based in the Rhineland region to attend our series of inspiring in-person talks on RNA-related topics by local and invited speakers. This time on Monday July 13th in the DZNE auditorium in Bonn.
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Elif Karagöz
Julius Brennecke
25 days ago
a small attempt to capture this enormous loss and what Greg meant and means to so many.
www.cell.com/cell/fulltex...
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Gregory J. Hannon (1964–2026)
Gregory J. Hannon passed away in April 2026 at the age of 61. A towering figure in modern molecular biology, Greg influenced remarkably diverse areas of science. His work reshaped our understanding of...
https://www.cell.com/cell/fulltext/S0092-8674(26)00640-9
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Elif Karagöz
bioRxiv Microbiology
25 days ago
BacPROTACs outperform inhibitors in Mycobacterium tuberculosis
https://www.biorxiv.org/content/10.64898/2026.06.12.731830v1
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Elif Karagöz
28 days ago
www.nature.com/articles/s41...
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Structural basis for chaperone-guided assembly of RNA-induced silencing complex - Nature
Structures of the AGO maturation complex reveal how chaperones and an RNA duplex drive assembly of the RNA-induced silencing complex.
https://www.nature.com/articles/s41586-026-10640-2
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Elif Karagöz
Christine Mayr
30 days ago
Finally out in @Cellcellpress! Proteins with long IDRs are prone to misfolding during protein synthesis. This is prevented by mRNA 3′UTRs that act as mRNA-based IDR chaperones.
www.cell.com/cell/fulltex...
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mRNA 3′ UTRs chaperone intrinsically disordered regions to control protein activity
Highly conserved mRNA 3′ UTRs act as co-translational chaperones for intrinsically disordered regions (IDRs), preventing inter-domain misfolding and enabling biogenesis of fully active proteins.
https://www.cell.com/cell/fulltext/S0092-8674%2826%2900576-3
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Elif Karagöz
Aakriti Jain
about 1 month ago
So excited to share our new paper out today in
@nature.com
- 'LASER couples damage sensing to ESCRT assembly for lysosome repair'. This was an amazing collaborative effort with Claire Goul during our time in
@robzonculab.bsky.social
:
www.nature.com/articles/s41...
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LASER couples damage sensing to ESCRT assembly for lysosome repair - Nature
ATG8 conjugation on damaged lysosomes triggers rapid assembly of a protein complex containing TFG, which directs lysosomal membrane repair by recruiting ESCRT proteins to sites of damage.
https://www.nature.com/articles/s41586-026-10604-6
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reposted by
Elif Karagöz
Nature
about 1 month ago
Nature research paper: Substrate selectivity of the human RNA m5C methyltransferase NSUN2
go.nature.com/4v7ZeTt
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Substrate selectivity of the human RNA m5C methyltransferase NSUN2 - Nature
NSUN2 is an enzyme that adds a small chemical mark to RNA molecules and uniquely selects its targets based on specific sequence patterns and structural features.
https://go.nature.com/4v7ZeTt
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Elif Karagöz
Harvard Med Cell Biology
about 1 month ago
Single molecule studies from Arda Mizrak in the Farese/Walther @msk & Harper Labs
@harvardcellbio.bsky.social
shows how lipid droplet proteins track through ER networks to ultimately partition into nanodomains on droplets, dependent upon Trp-containing hairpin motifs
www.nature.com/articles/s41...
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Membrane bridges and nanodomain partitioning govern membrane protein targeting to lipid droplets - Nature Cell Biology
Mizrak et al. use single-molecule tracking to dissect mechanisms of protein targeting to lipid droplets. They show that nanodomain-based confinement drives selective protein accumulation on lipid drop...
https://www.nature.com/articles/s41556-026-01963-3
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Elif Karagöz
Friedrich Förster
about 1 month ago
The first cut is the deepest: Cleavable signal peptides direct thousands of different nascent proteins to the endoplasmic reticulum. Oddly, SPs are all different and nevertheless cleaved with exquisite specificity. Our new cryo-EM structures + MD solve this paradox:
www.nature.com/articles/s41...
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Structural basis of signal peptide recognition by the signal peptidase complex - Nature Communications
Signal peptides are highly variable, yet the signal peptidase complex processes them with remarkable specificity. Here, authors combine cryo-EM, molecular dynamics simulations and modeling to reveal a...
https://www.nature.com/articles/s41467-026-73423-3
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Elif Karagöz
Pauli Group (posts by Andi Pauli)
about 2 months ago
New insights into
#fertilization
from the
@pauligroup.bsky.social
& Ikawa labs! In a tour-de-force study, we discovered ✨ SPARK ✨, a conserved sperm fertilization complex that couples sperm-egg binding to membrane fusion. Read on 🧵👇 and check out our preprint for more details!
tinyurl.com/34cm4xat
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reposted by
Elif Karagöz
Clausen Lab
about 2 months ago
Open Postdoc Position - Giant E3 ligases: mysterious mechanisms & non‑protein substrates. Interested? Join us to uncover how these molecular giants tag lipids, RNAs, sugars beyond proteins, on organelles and pathogens, to defend the cell. Details & Application here
www.imp.ac.at/career/open-...
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Elif Karagöz
IMP
about 2 months ago
📣 Registration is open for the 20th Microsymposium on RNA Biology! Join in at the Vienna BioCenter for three days of cutting-edge science, discussion & networking. 📅 17-19 June 2026 🧬 Poster abstract deadline: 19 May Info & registration:
www.oeaw.ac.at/imba/seminar...
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Elif Karagöz
Jonathan Weissman Lab
about 2 months ago
Excited to share a new preprint from the lab led by
@lukekoblan.bsky.social
and William Colgan in which we describe our efforts to define a quantitative cell fate map of mouse embryogenesis!
www.biorxiv.org/content/10.6...
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Elif Karagöz
Junjie Guo
2 months ago
Check out the phenomenal PhD work by Katie Copley, a current postdoc in our lab
@yaleneuro.bsky.social
@yalerna.bsky.social
.
www.science.org/doi/10.1126/...
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Short RNA chaperones promote aggregation-resistant TDP-43 conformers to mitigate neurodegeneration
Aberrant aggregation of the prion-like RNA binding protein TDP-43 drives several fatal neurodegenerative proteinopathies, including amyotrophic lateral sclerosis (ALS). In this work, we define how sho...
https://www.science.org/doi/10.1126/science.adv3301
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Elif Karagöz
niels-fischer.bsky.social
2 months ago
How do mitochondrial ribosomes keep pace with membrane insertion? Now out in NSMB: We show that mitoribosomes slow down at defined positions linked to membrane insertion and protein topology:
rdcu.be/fhqIT
#Mitochondria
#Ribosome
#CryoEM
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Membrane insertion of mitochondrial-encoded proteins regulates ribosome decoding speed
Nature Structural & Molecular Biology - Schöndorf and Petrychenko et al. show that mitochondrial translation speed is coupled to OXA1L-mediated inner membrane insertion, with...
https://rdcu.be/fhqIT
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Elif Karagöz
Yasin Dagdas
2 months ago
Now online at
@natplants.nature.com
‼️ Led by Jierui Zhao, a former PhD student
@gmivienna.bsky.social
& together w/
@moritznowack.bsky.social
lab, we uncover how
#autophagy
shapes salt stress tolerance and lifespan.
www.nature.com/articles/s41...
www.nature.com/articles/s41...
A short 🧵👇
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Cell-type-specific autophagy in root-hair-forming cells is essential for salt stress tolerance in Arabidopsis thaliana - Nature Plants
This study reveals that enhanced autophagy in root-hair-forming cells helps Arabidopsis store excess sodium, control oxidative stress and tolerate salt stress.
https://www.nature.com/articles/s41477-026-02285-w
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Elif Karagöz
Elias Adriaenssens
2 months ago
My favourite meeting of the year has arrived again! 👇🤩
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Elif Karagöz
Şuayb Üstün
2 months ago
🚨 Paper out now in
#ScienceAdvances
@science.org
🌱🦠 Pathogens don’t just target protein degradation—they also hijack host translation. "Bacteria use P-body condensates to attenuate host translation during infection" ⚖️♻️ led by
@manuelgonzalezfuen.bsky.social
www.science.org/doi/10.1126/...
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Elif Karagöz
Torben Heick Jensen
3 months ago
Final call for postdoctoral positions in my lab in wonderful Århus. You may apply using this link:
mbg.au.dk/en/news-and-...
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Postdoc positions in Nuclear RNA Biology - Vacancy at Aarhus University
Vacancy at Department of Molecular Biology and Genetics - RNA Biology and Innovation, Aarhus University
https://mbg.au.dk/en/news-and-events/vacancies/job/postdoc-positions-in-nuclear-rna-biology-2
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Elif Karagöz
Haselbach Lab
3 months ago
A new paper in which we could contribute structural insights to the great biochemical work from our collaborators from UNC Chapel Hill. Sascha Amann from our lab was yet again able to solve several very challenging structures. This time of a SCF with Protac and target
www.nature.com/articles/s41...
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Elif Karagöz
David Balchin
3 months ago
New from our lab
@crick.ac.uk
. Nascent proteins emerge from the human ribosome into a cytosol packed with hundreds of different molecular chaperones. Which chaperones recognise specific nascent chains, and what dictates their binding preferences?
www.biorxiv.org/content/10.6...
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Elif Karagöz
Yamuna Krishnan
3 months ago
This is .wild. !
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Elif Karagöz
Martin Loose
3 months ago
Now out in its final form!
www.science.org/doi/10.1126/...
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reposted by
Elif Karagöz
Stella Hurtley
3 months ago
Out now in
@science.org
Repurposing of a DNA segregation machinery into a cytoskeletal system controlling cell shape | Science
www.science.org/doi/10.1126/...
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Repurposing of a DNA segregation machinery into a cytoskeletal system controlling cell shape
Bacteria, like eukaryotes, use conserved cytoskeletal systems for intracellular organization. The plasmid-encoded ParMRC system forms actin-like filaments that segregate low–copy number plasmids. In m...
https://www.science.org/doi/10.1126/science.aea6343
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Our lab is looking for a lab technician! If you share our passion for fundamental research and happy to contribute, join us!
add a skeleton here at some point
3 months ago
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Elif Karagöz
Max Perutz Labs Vienna
3 months ago
🔬 Passionate about RNA biology? Join the lab of
@sebastianfalk.bsky.social
for your Master's project to explore the function of proteins and protein complexes using cutting-edge biochemical, structural, and cell biology approaches ➡️
tinyurl.com/3k7upan4
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Elif Karagöz
David Teis
3 months ago
We offer a PostDoc position for a fully funded project on lipid-encoded
#lipidtime
protein quality-control checkpoints at the Golgi: great collaborators, excellent working & living conditions & benchspace with a view ;) Please share and repost!
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Elif Karagöz
Stella Hurtley
3 months ago
Out now in
@science.org
Harnessing viral strategies to reverse cognitive dysfunction through the integrated stress response | Science
www.science.org/doi/10.1126/...
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Harnessing viral strategies to reverse cognitive dysfunction through the integrated stress response
The integrated stress response (ISR) is essential for cellular homeostasis and cognitive function. We investigated how persistent ISR activation affects cognitive performance by studying the PPP1R15BR...
https://www.science.org/doi/10.1126/science.aea8782
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Elif Karagöz
Vienna BioCenter Scientific Training
3 months ago
Exciting job offer: PhD Program Manager. Lead recruitment, support PhD candidates, and shape doctoral training at a top international life sciences campus. https://ow.ly/3YkN50YAuGM
Institute of Molecular Biotechnology
,
Max Perutz Labs Vienna
,
IMP
,
Gregor Mendel Institute of Molecular Plant Biology
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Elif Karagöz
Max Perutz Labs Vienna
3 months ago
New opportunity with the Vienna BioCenter Scientific Training Team! 🙌 As PhD Program Manager, you’ll play a key role in empowering and shaping the careers of the next generation of world-class researchers ➡️
tinyurl.com/yrk23na2
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Congrats to Ni, Dagdas lab and everyone involved! Happy to contribute to this exciting work!
add a skeleton here at some point
3 months ago
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Elif Karagöz
Kurianlab
3 months ago
Excited host
@hohmannulrich.bsky.social
from
@imbmainz.bsky.social
, along with
@manuelkaulich.bsky.social
Date: 07.04.2026 Time: 15:00 Venue: Haus 22 Seminar Room 1. (S22-1) Title: ‘Mechanistic insights into nuclear mRNA export and degradation’
@goetheuni.bsky.social
@cpi-exstra.bsky.social
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reposted by
Elif Karagöz
Max Perutz Labs Vienna
3 months ago
Looking for an exciting and ambitious Master’s project? 👀 Join the
@huis.bsky.social
lab, where two Master’s positions are currently available to explore how genome stability and chromosome segregation are controlled in human cells ➡️
tinyurl.com/ybddpx7c
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Elif Karagöz
The EMBO Journal
3 months ago
What are the roles of UFMylation during ribosome-associated quality control?
@gekaragoz.bsky.social
@plantophagy.bsky.social
and colleagues find it to cooperate with RQC factors in promoting clearance of arrested nascent polypeptides at the ER
link.springer.com/article/10.1...
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The coordinated action of UFMylation and the RQC pathways clears arrested polypeptides at the ER - The EMBO Journal
Clearance of arrested nascent polypeptides resulting from ribosomal stalling is essential for proteostasis. Stalled endoplasmic reticulum (ER)-bound ribosomes are marked by ubiquitin-fold modifier 1 (...
https://link.springer.com/article/10.1038/s44318-026-00753-9
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reposted by
Elif Karagöz
Yasin Dagdas
3 months ago
Congrats Milica
@alessandrick.bsky.social
& everyone
@gekaragoz.bsky.social
lab. Glad we could contribute to this awesome story on
#UFMylation
&
#RQC
crosstalk
@embojournal.org
link.springer.com/article/10.1...
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The coordinated action of UFMylation and the RQC pathways clears arrested polypeptides at the ER - The EMBO Journal
Clearance of arrested nascent polypeptides resulting from ribosomal stalling is essential for proteostasis. Stalled endoplasmic reticulum (ER)-bound ribosomes are marked by ubiquitin-fold modifier 1 (...
https://link.springer.com/article/10.1038/s44318-026-00753-9
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Our work on the role of Ufmylation on ribosome quality control on the ER is out! Great work of two terrific first authors Milica and
@alessandrick.bsky.social
together with our wonderful collaborators, the one and only Dagdas lab
@plantophagy.bsky.social
!
add a skeleton here at some point
3 months ago
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Elif Karagöz
Carter Lab
4 months ago
Excited to share our work on the structure and function of cytoplasmic lattices within mouse embryos. A collaborative effort with
@niakanlab.bsky.social
and work led by
@kashishsingh.bsky.social
and
@inaharasimov.bsky.social
. It is now out on BioRxiv:
www.biorxiv.org/content/10.6...
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Elif Karagöz
André Nadler
4 months ago
It’s incredibly hard to study lipids in biological membranes on the nanoscale. You need near-perfect information on both membrane ultrastructure and lipid density. Lipid-CLEM, now out in
@natcellbio.nature.com
brought to you by
@mathilda95.bsky.social
changes that:
www.nature.com/articles/s41...
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Elif Karagöz
Max Perutz Labs Vienna
4 months ago
The BioOptics facility will expand their team with a Junior Imaging Scientist with a background in Biological Sciences, who is enthusiastic about applying cutting-edge light microscopy for imaging-based research 🔬 Join a collaborative service team at the Perutz today! ➡️
tinyurl.com/5n7m2dyw
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