Manuel Kaulich
@manuelkaulich.bsky.social
📤 310
📥 59
📝 36
Professor @ Goethe Uni & IBC2-GU, Co-founder of Vivlion.
#BerlinER
#FrankfurtER
#PERTomics
, the systematic functional perturbation of genes and quantification of subcellular, cellular, and organismal responses. To functionally annotate uncharacterized genes, build genetic interaction maps, identify drug dependencies and synergies, and understand polygenetic biology.
3 months ago
1
5
2
DNA guides instead of RNA?! A CRISPR-Cas12a system flips the script, using DNA guides to target RNA. 🔬 Enables direct RNA detection + knockdown 🧬 Reveals a distinct activation mechanism ⚙️ Expands the toolbox for programmable RNA control Big step for CRISPR versatility.
www.nature.com/articles/s41...
loading . . .
DNA-guided CRISPR–Cas12a effectors for programmable RNA recognition and cleavage - Nature Biotechnology
Synthetic DNA guides (crDNA) reprogram Cas12a nucleases for RNA targeting.
https://www.nature.com/articles/s41587-026-03120-5
3 months ago
0
5
1
reposted by
Manuel Kaulich
Kurianlab
4 months ago
Excited host
@hohmannulrich.bsky.social
from
@imbmainz.bsky.social
, along with
@manuelkaulich.bsky.social
Date: 07.04.2026 Time: 15:00 Venue: Haus 22 Seminar Room 1. (S22-1) Title: ‘Mechanistic insights into nuclear mRNA export and degradation’
@goetheuni.bsky.social
@cpi-exstra.bsky.social
0
18
10
A fantastic line up of speakers. Hope to see many of you in wonderful Mainhatten (Frankfurt).
add a skeleton here at some point
4 months ago
0
3
1
Happy to share another paper from the lab. While KEAP1 is often mutated in aggressive lung cancer, its loss can paradoxically suppress tumor growth in certain contexts by inducing Nrf2-driven reductive stress.
link.springer.com/article/10.1...
loading . . .
Targeting ubiquitin signaling vulnerabilities in KEAP1-inactivated lung cancer - The EMBO Journal
Lung cancer cells rely on protein homeostasis regulators, particularly the ubiquitin-proteasome system (UPS), to sustain malignancy. Genetic alterations in UPS components, such as E3 ubiquitin ligases...
https://link.springer.com/article/10.1038/s44318-026-00737-9
4 months ago
0
3
3
reposted by
Manuel Kaulich
Stegle Lab
4 months ago
How do immune disease-relevant variants rewire gene regulation in CD4+ T cells? In a collaboration led by Daniel Schraivogel and Lars Steinmetz at
@embl.org
, we combined two large-scale CRISPRi screens (4.1M cells) to map the downstream cascades of thousands of SNPs.
loading . . .
1
13
9
reposted by
Manuel Kaulich
Open Targets
4 months ago
Out now on bioRxiv! 🧬🖥️ Dewi Moonen,
@anniquec.bsky.social
and a team led by Lars Steinmetz and Daniel Schraivogel at EMBL have mapped the downstream regulatory networks of thousands of immune disease-relevant variants in CD4+ T cells
www.biorxiv.org/content/10.6...
loading . . .
https://www.biorxiv.org/content/10.64898/2026.03.09.710372v1
1
14
3
reposted by
Manuel Kaulich
4 months ago
Very proud to see this work out on bioRxiv. Using genome-scale TAP/Perturb-seq we mapped the function of immune-disease variants to target genes and regulatory cascades. Have a look at the 🧵from
@anniquec.bsky.social
for more info!
add a skeleton here at some point
0
7
3
So great to this preprint out. It was/is such a pleasure to work with this fantastic team. Congratulations to all of you!
add a skeleton here at some point
4 months ago
0
3
0
reposted by
Manuel Kaulich
Evangelia Petsalaki
5 months ago
Our preprint is published in MSB! This time with the correct preprint post below!
link.springer.com/article/10.1...
add a skeleton here at some point
1
7
6
reposted by
Manuel Kaulich
Max Planck Institute of Molecular Cell Biology and Genetics
5 months ago
The public event "CRISPR Gene scissors in Dresden" is taking place March 26 to 29. The "CRISPR-Roadshow" is teaming up with partners
@mpi-cbg.de
,
@tudresden.bsky.social
, and
@crtd-tud.bsky.social
for a wide range of activities on the CRISPR/Cas method.
www.crispr-whisper.de/2025/10/01/d...
loading . . .
Die Genschere in Dresden, 26.3.2026 bis 29.3.2026 - CRISPR-Whisper
Die „CRISPR-Roadshow“ ist ein Projekt des Forschungskonsortiums SPP2141, mit dem Wissenschaft für jedermann verständlich und erlebbar wird. Der SPP2141 ist eine Gruppe von 20 Forschungslaboren, die vo...
https://www.crispr-whisper.de/2025/10/01/die-genschere-in-dresden/
0
9
8
reposted by
Manuel Kaulich
IorioLab
5 months ago
Insights from the 2nd EuroDepMap Symposium are now out in FEBS Letters. Last November at Human Technopole researchers in cancer functional genomics and computational biology discussed challenges and future directions in mapping cancer vulnerabilities and building predictive frameworks. Link ⬇️
1
3
2
Our thoughts, impressions, and presentations of the "2nd EuroDepMap symposium" in Milan (Nov 2025) are online at
@febsletters.bsky.social
.
febs.onlinelibrary.wiley.com/doi/10.1002/...
loading . . .
FEBS Press
Held on 20 November 2025 at Human Technopole in Milan, the 2nd European Cancer Dependency Map Symposium convened experimental and computational scientists to discuss how cancer dependency mapping in ...
https://febs.onlinelibrary.wiley.com/doi/10.1002/1873-3468.70306
5 months ago
0
5
8
reposted by
Manuel Kaulich
Human Technopole
8 months ago
💫 Thank you to all participants and speakers who joined us at the 2nd
@eurocancerdepmap.bsky.social
Symposium! Together, we’re advancing
#cancer
functional genomics across Europe.
youtu.be/Qt_ozbzM5js
loading . . .
2nd European Cancer Dependency Map Symposium - 20 Nov 2025
YouTube video by Human Technopole
https://youtu.be/Qt_ozbzM5js
1
6
5
reposted by
Manuel Kaulich
2nd European Cancer Dependency Map Symposium
8 months ago
The Synthetic Lethality and Innovations in CRISPR Screening session begins with
@manuelkaulich.bsky.social
telling us about exciting CRISPR libraries they have developed and how nuclear mRNA processing can mask the CRISPRko phenotypes
@eurocancerdepmap.bsky.social
0
12
4
reposted by
Manuel Kaulich
Constantin Ahlmann-Eltze
12 months ago
Our paper benchmarking foundation models for perturbation effect prediction is finally published 🎉🥳🎉
www.nature.com/articles/s41...
We show that none of the available* models outperform simple linear baselines. Since the original preprint, we added more methods, metrics, and prettier figures! 🧵
2
125
63
In times when science must defend itself, the decision by the German Research Foundation (DFG) to significantly support German universities through the Excellence Initiative for the next seven years is a signal that stands unparalleled.
www.dfg.de/en/news/news...
loading . . .
Announcement of Clusters of Excellence to Receive Funding in the Future, Thursday, 22 May 2025, from approx. 5 pm
https://www.dfg.de/en/news/news-topics/announcements-proposals/2025/ifr-25-29
about 1 year ago
0
0
0
Such a wonderful example of what genetic screens can tell us about human patho/physiology. Cudos
@mgarnett.bsky.social
, Fiona Behan and many more.
add a skeleton here at some point
about 1 year ago
0
0
0
Congratulations! & thanks for letting us contribute to this wonderful story.
add a skeleton here at some point
about 1 year ago
0
2
0
reposted by
Manuel Kaulich
William Gibson
over 1 year ago
821
104583
16875
A record low…. only 16% of Germans think that Germany can trust the US. A record fast…. never before lost a US president support for its political agenda that fast.
www.spiegel.de/politik/deut...
loading . . .
Deutschlandtrend der ARD: Nur 16 Prozent halten USA noch für vertrauenswürdig
Bleiben die USA der wichtigste Verbündete Europas? Die große Mehrheit in Deutschland glaubt einer Umfrage zufolge offenbar nicht mehr an eine gute Zusammenarbeit.
https://www.spiegel.de/politik/deutschlandtrend-der-ard-nur-16-prozent-der-deutschen-halten-usa-noch-fuer-vertrauenswuerdigen-partner-a-1377f682-cd5f-4582-b411-7853570245e6
over 1 year ago
0
0
0
If a team wished to include combinatorial gene perturbation and bioinformatics in their program, please reach out.
add a skeleton here at some point
over 1 year ago
0
4
3
reposted by
Manuel Kaulich
Mathew Garnett
over 1 year ago
New Gordon Research Conference Alert: Synthetic Lethality Approaches in Oncology.
www.grc.org/synthetic-le...
. Join us 20-25th July 2025 for an intimate meeting with thought leaders in the field. Great for networking and opportunities for early career scientists to present their research.
0
5
8
80% of Germans (84% participation) voted for democracy.
#TogetherAgainstPopulism
over 1 year ago
0
0
0
Interested in synthetic lethality or how functional genomics can be leveraged for clinical benefit? Then, this is the place to meet:
www.grc.org/synthetic-le...
loading . . .
2025 Synthetic Lethality Approaches in Oncology Conference GRC
The 2025 Gordon Research Conference on Synthetic Lethality Approaches in Oncology will be held in Portland, Maine. Apply today to reserve your spot.
https://www.grc.org/synthetic-lethality-approaches-in-oncology-conference/2025/
over 1 year ago
0
1
1
If you search for unexpected phenotypes (genetic interactions), aren't they expected when observed? 🤔
over 1 year ago
0
0
0
Which rate do you consider appropriate, 10% or 1% ?
add a skeleton here at some point
over 1 year ago
0
0
0
Thinking about grant alternatives to fund basic research? Provocative thought - How about getting a royalty rate per accessed publication (per corresponding author)?
over 1 year ago
0
1
1
reposted by
Manuel Kaulich
The Cancer Dependency Map
over 1 year ago
📣Registration is now open for an exciting Gordon Conference on synthetic lethality organized by Ben Schwartz (GSK), Mathew Garnett (Sanger), and Francisca Vazquez (DepMap Director, Broad Institute) Highly recommended! Register here
grc.org/synthetic-le...
loading . . .
2025 Synthetic Lethality Approaches in Oncology Conference GRC
The 2025 Gordon Research Conference on Synthetic Lethality Approaches in Oncology will be held in Portland, Maine. Apply today to reserve your spot.
https://grc.org/synthetic-lethality-approaches-in-oncology-conference/2025/
0
4
4
reposted by
Manuel Kaulich
CSHL Meetings
over 1 year ago
FYI 🔔The abstract deadline for
#cshlnetworks
is coming up - Jan. 27th! Register to submit your abstract here:
bit.ly/40cIfSl
@fritzroth.bsky.social
@jsvanleeuwen.bsky.social
@pedrobeltrao.bsky.social
loading . . .
Network Biology
Cold Spring Harbor Laboratory Meetings & Courses -- a private, non-profit institution with research programs in cancer, neuroscience, plant biology, genomics, bioinformatics.
http://bit.ly/40cIfSl
0
3
7
The German Research Council, aka DFG, is on BlueSky. Welcome
@dfgpublic.bsky.social
add a skeleton here at some point
over 1 year ago
0
2
0
reposted by
Manuel Kaulich
Wellcome Connecting Science Learning and Training
over 1 year ago
Make your mark on the future of
#PrecisionMedicine
at
#CRISPR25
! Showcase
#CRISPR
methods for modulating the genome at scale🧬 𝗦𝘂𝗯𝗺𝗶𝘁 𝗮𝗻 𝗮𝗯𝘀𝘁𝗿𝗮𝗰𝘁 𝗯𝘆 𝟰 𝗙𝗲𝗯𝗿𝘂𝗮𝗿𝘆 for a chance to build your professional profile at the forefront of a global community. 📎
bit.ly/3BDXOtP
0
2
3
Are you interested in how genes/proteins interact to regulate cellular and organismal physiology? If so, let's grab a coffee at the upcoming
#CSHL
Network Biology meeting.
meetings.cshl.edu/meetings.asp...
loading . . .
Network Biology
Cold Spring Harbor Laboratory Meetings & Courses -- a private, non-profit institution with research programs in cancer, neuroscience, plant biology, genomics, bioinformatics.
https://meetings.cshl.edu/meetings.aspx?meet=NETWORK
over 1 year ago
0
0
0
I messed up my earlier message by using the wrong link/date. So here is the correction!! See you in Hinxton (2–4 April, 2025)
coursesandconferences.wellcomeconnectingscience.org/event/crispr...
loading . . .
CRISPR and Beyond: Perturbations at Scale to Understand Genomes — 20250402
Exploring methods to modulate the genome at scale
https://coursesandconferences.wellcomeconnectingscience.org/event/crispr-and-beyond-perturbations-at-scale-to-understand-genomes-20250402/
over 1 year ago
0
2
0
Wow ! Not only the topic, but look at this line up of speakers. How can one not go?
add a skeleton here at some point
over 1 year ago
0
1
0
reposted by
Manuel Kaulich
Alexis Verger 🧬🧫🧪
over 1 year ago
Look who's here
@pnas.org
✔️
@science.org
✔️
@naturecellbiology.bsky.social
✔️
@natrevgenet.bsky.social
✔️
@naturebiotech.bsky.social
✔️
@naturemicrobiol.bsky.social
✔️
@naturechemistry.bsky.social
✔️
@genesdev.bsky.social
✔️
@cellchembiol.bsky.social
✔️
@genomeresearch.bsky.social
✔️
@jcellbiol.bsky.social
✔️
34
503
257
I’ll be pitching a Mosbacher Kolloquium at the next annual meeting of the German Society for Biochemistry and Molecular Biology (GBM). The topic will be „Advances in gene regulation, editing, and medicine“. Anything that you’d like to be highlighted?
gbm-online.de/en/the-gbm-2...
loading . . .
GBM-Startseite - Homepage of the German Society for Biochemistry and Molecular Biology (GBM, Gesellschaft für Biochemie und Molekularbiologie e.V.)
The German Society for Biochemistry and Molecular Biology - GBM is an interest representation for scientists. Contents are scientific meetings, study groups (Fachgruppen), journals Biospektrum and Bio...
https://gbm-online.de/en/the-gbm-2.html
over 1 year ago
0
0
2
reposted by
Manuel Kaulich
Nagehan Ramazanoglu Bahadir
over 1 year ago
Join us for the 6th CRISPR and Beyond Conference on 2-4 April 2025!🧬 A must-attend event for researchers in high-throughput screening and
#GeneEditing
, exploring emerging technologies and models.
#CRISPR25
👉Programme and registration:
bit.ly/3Amz34N
2
18
13
Incredibly proud of my PhD student @MartinWegner for receiving this year’s PhD award of the @GoetheUniversityFrankfurt. 🎉🎊🥳🍾 I guess with 11 papers, multiple patents, and a spinoff, it’s kind of deserved 🤔
over 1 year ago
0
3
0
you reached the end!!
feeds!
log in