@fitzpatricklab.bsky.social
📤 752
📥 2834
📝 22
pinned post!
Pulsed
#lasers
integrated with
#cryoEM
:
@fitzpatricklab.bsky.social
postdoc Daniel Du aims to boost contrast in
#cryoET
zuckermaninstitute.columbia.edu/making-world-s-best-microscopes-biology-better
zuckermaninstitute.columbia.edu/science-life-daniel-du
elifesciences.org/reviewed-preprints/109793v1
5 months ago
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reposted by
John Rubinstein
5 days ago
CryoSPARC workshop in Toronto! Beyond consensus refinements: Advanced cryo-EM data processing with CryoSPARC Sept 24-25, 2026 (part of the Canadian Cryo-EM Nexus) Register here:
cvent.me/dL1wem
Please see details in the link or the image Alt text
@structurabio.bsky.social
@sickkidsto.bsky.social
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reposted by
Sonja Blumenstock
10 days ago
Paper:
www.nature.com/articles/s41...
Huge thanks to my collaborators, mentors
@irinadudanova.bsky.social
and
@takakikomiyama.bsky.social
, and funders (DFG, NIH, ERC, Joachim Herz Fndt., CZI, Simons Fndt.) who made this possible. It’s been a long, exciting road and there’s more ahead. Onward!
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Restoring cortical disinhibition improves Huntington’s disease phenotypes - Nature
In a mouse model of Huntington’s disease, targeted modulation of neuronal activity restores network function and improves motor deficits.
https://www.nature.com/articles/s41586-026-10671-9
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@cmholab.bsky.social
@columbiamed.bsky.social
solve decades-old mystery of how malaria parasites invade human cells | EurekAlert!
www.eurekalert.org/news-release...
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Scientists solve decades-old mystery of how malaria parasites invade human cells
Columbia scientists caught a malaria parasite in the act of breaking into a blood cell, revealing a parasite machine that reshapes the cell from the inside. They then designed a&nb...
https://www.eurekalert.org/news-releases/1134003
11 days ago
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3
0
reposted by
Chi-Min Ho
11 days ago
Incredibly proud of Messi Haile
@mehsehret.bsky.social
, a founding member of the Ho Lab, for her beautiful work uncovering the inner workings of a central piece of the malaria parasite invasion machinery: the malarial moving junction, out today in
@cellpress.bsky.social
!
tinyurl.com/4p3md2eb
🦠❄️🔬
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reposted by
16 days ago
Galvanin (TMEM154) is an electric-field sensor for directed cell migration: Cell
www.cell.com/cell/fulltex...
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Galvanin (TMEM154) is an electric-field sensor for directed cell migration
Galvanin is an electric-field sensor that links electrical cues to directed migration in rapidly moving cells.
https://www.cell.com/cell/fulltext/S0092-8674%2826%2900461-7
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7
reposted by
Katharina Geißler
16 days ago
What is the best way to distribute the electron dose across your tilt series in cryo ET? Thanks to Maarten Tuijtel, we finally know --> head over to eLife for the publication!
doi.org/10.7554/eLif...
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the-one-percent.qedscience.com
Thanks to
#qed
for including our preprint entitled "Amyloid-mediated RNA uptake by sperm for embryonic delivery" in the most compelling preprints of 2025!
www.biorxiv.org/content/10.6...
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QED — The most compelling preprints of 2025
https://the-one-percent.qedscience.com/
17 days ago
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3
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reposted by
Sammy Chan
26 days ago
Now in Nature SMB: how do proteins fold while still being made? We solved all-atom structures of two ribosome-tethered folding intermediates—invisible to cryo-EM, seen only by ¹⁹F NMR. Thank you
@julianstreit.bsky.social
, John Christodoulou & co-authors!
nature.com/articles/s41594-026-01814-7
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Structures of protein folding intermediates on the ribosome - Nature Structural & Molecular Biology
Atomistic structural ensembles of protein folding intermediates on the ribosome are resolved by comprehensive 19F nuclear magnetic resonance analyses integrated with molecular dynamics simulations, pr...
https://nature.com/articles/s41594-026-01814-7
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Hats off to JC and team, amazing work
add a skeleton here at some point
25 days ago
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reposted by
Laurel Oldach
about 1 month ago
Microscopy nerd alert: two scopes in California can now do phase contrast cryoEM - potentially fixing the tech's very low signal/noise ratio. The phase filter they used is a laser. Which is also the brightest thing in the solar system (outside of the inside of the sun).
cen.acs.org/analytical-c...
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15 years, flawless mirrors, and the brightest laser in the world: How physicists brought phase contrast to cryo-EM
Phase contrast enables structures of smaller proteins, could drive in-cell proteomics
https://cen.acs.org/analytical-chemistry/microscopy/laser-phase-plate-cryo-electron-microscopy-advance/104/web/2026/06
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reposted by
Cell Press
about 1 month ago
Scientists detail a previously unknown pathway by which our bodies fight infections--directly inside infected cells. Read more in Molecular Cell:
www.cell.com/molecular-ce...
Tyler Rhinesmith, Leo James, & colleagues
@cp-molcell.bsky.social
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Automation of
#CryoEM
SPA from raw movies in
@cryosparc.bsky.social
to the generation of high-resolution density maps Resolution improved in 80% of the targeted
#GPCR
datasets The pipeline in this paper is available for download and use:
biorxiv.org/content/10.1...
about 1 month ago
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21
3
reposted by
Chi-Min Ho
about 2 months ago
Incredibly excited and grateful to be joining the Burroughs Wellcome Fund family! Thank you
@bwfund.bsky.social
and the selection committee members for supporting and believing in our vision and congrats to the other 2026 PATH Investigators!!! 🥳
add a skeleton here at some point
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reposted by
Cornelius Gati
3 months ago
Exciting to see momentum building around our concept of inverse agonist-bound GPCR–G protein complex structures (PMID: 39775170). Great work from the groups of Can Cao & Xiaoguang Lei: a clinically viable MRGPRX4 inverse agonist for chronic itch with therapeutic potential. Congrats to all!
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Development of a clinically viable MRGPRX4 inverse agonist for cholestatic itch treatment - Nature Chemical Biology
This study elucidates the structural mechanism of HEP-50768, a novel MRGPRX4 inverse agonist, and demonstrates its potent anti-itch efficacy and favorable safety in preclinical models, positioning it ...
https://www.nature.com/articles/s41589-026-02195-0
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3
1
reposted by
Jamie Blaza
5 months ago
Effective laser phase plates should be transformational for cryo-EM and this proof of principle study shows a pulsed system successfully intergrated in a SEM. A powerful step towards functional systems in a cryo-TEM
add a skeleton here at some point
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Pulsed
#lasers
integrated with
#cryoEM
:
@fitzpatricklab.bsky.social
postdoc Daniel Du aims to boost contrast in
#cryoET
zuckermaninstitute.columbia.edu/making-world-s-best-microscopes-biology-better
zuckermaninstitute.columbia.edu/science-life-daniel-du
elifesciences.org/reviewed-preprints/109793v1
5 months ago
0
20
7
reposted by
Columbia University's Zuckerman Institute
5 months ago
Neuroscientists are always looking for new tools that can bring the brain into sharper focus. For postdoc Daniel Du, that means shooting lasers at state-of-the-art microscopes to take better snapshots of the building blocks of the brain:
zuckermaninstitute.columbia.edu/science-life...
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4
2
reposted by
Columbia University's Zuckerman Institute
5 months ago
How do you make one of the best microscopes in biology even better? Postdoc Daniel Du of the Fitzpatrick lab zapped electrons with a laser. The new research in
@elife.bsky.social
with Cornell’s Maxson lab promises improved snapshots of the brain:
zuckermaninstitute.columbia.edu/making-world...
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3
2
reposted by
Structura Biotechnology
6 months ago
🚀 CryoSPARC v5.0 BETA is here! We’re excited to deploy another major
#CryoSPARC
release to help enable and accelerate
#cryoEM
data analysis. v5 has a redesigned underlying software system and many new features - highlights in thread! Full changelog:
cryosparc.com/updates/v5.0.0
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Frozen Bryant Park fountain in snowy NYC!
6 months ago
1
4
0
reposted by
Science X / Phys.org
6 months ago
A combined approach using light microscopy and ion beam milling enhances the precision of cryoET sample preparation, enabling more accurate targeting of small, rare structures within cells.
doi.org/hbkb94
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Tightening the focus of subcellular snapshots: Combined approach yields better cell slices for cryoET imaging
Taking images of tiny structures within cells is tricky business. One technique, cryogenic electron tomography (cryoET), shoots electrons through a frozen sample.
https://phys.org/news/2026-01-tightening-focus-subcellular-snapshots-combined.html?utm_source=bsky.app&utm_medium=social&utm_campaign=v2
0
4
1
reposted by
cryoEM papers
6 months ago
Reversible lipid-mediated pH-gating of connexin-46/50 by cryo-EM
pubmed.ncbi.nlm.nih.gov/41526355/
#cryoem
0
3
2
reposted by
bioRxivpreprint
7 months ago
Amyloid-mediated RNA uptake by sperm for embryonic delivery
https://www.biorxiv.org/content/10.64898/2025.12.10.693493v1
0
2
1
reposted by
Andrew Ellisdon
6 months ago
Excited to share our latest research, out today in Cell (
@cellpress.bsky.social
) Using cryo-EM and cell-based studies, we reveal how large nutrient sensing protein complexes form at the lysosomal membrane to turn off mTORC1 and halt anabolic signalling. Read the paper here:
doi.org/10.1016/j.ce...
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Another member of the Fitzpatrick/Shapiro quad
@zuckermanbrain.bsky.social
embarks on setting up his lab! If you wish to use
#cryoEM
#cryoET
to study how viruses enter & evade the immune system, & design antibody-based vaccines, check out the Roark lab:
isb.med.upenn.edu/research/cryoem-and-cryoet
6 months ago
0
4
0
reposted by
Yamuna Krishnan
7 months ago
Organelles do NOT have a single uniform pH. And if you think they must, because “protons diffuse fast,” this paper is for you. A thread on why that assumption is wrong; and what we found instead. 🧵 1/n
add a skeleton here at some point
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reposted by
Pawel Burkhardt
7 months ago
Thrilled to see our review article "The evolutionary origins of synaptic proteins" highlighted on the cover of Nature Reviews Neuroscience 🤩.
www.nature.com/articles/s41...
@msarscentre.bsky.social
🧠✨🧬🌊🪼🧽
add a skeleton here at some point
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reposted by
Kihara Laboratory
7 months ago
A quick tutorial on the DAQ structure validation score for protein models derived from cryo-EM. DAQ evaluates amino acid–level accuracy in your model. Consider including a DAQ validation report in your next publication!
www.youtube.com/watch?v=YRAT...
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DAQ-Score: Automatic AI-based Cryo-EM Structure Model Validation!
YouTube video by Kihara Bioinformatics Lab
https://www.youtube.com/watch?v=YRAT98tQx0Q
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8
5
reposted by
Roger Castells
7 months ago
I’m very happy (and grateful!) to share that I’m featured in a Nature Cancer Viewpoint about starting my lab at CNIO. In the Lab (
www.rcglab.com
) we’re combining AI, protein design and structural biology to study protein structures and design novel protein therapeutics for cancer. 🔬
1
9
5
reposted by
Rémi Fronzes
7 months ago
🔬 Just out in @NatureComms! Using cryo-CLEM and cryo-ET, we reveal the unique ultrastructure of dopaminergic varicosities in the striatum. Amazing collaboration with
@davip-bdx.bsky.social
and Etienne Herzog
@iins-bordeaux.bsky.social
Congratulations to Paul and Robin for this fantastic work! 🎉
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Cryo-correlative light and electron tomography of dopaminergic axonal varicosities reveals non-synaptic modulation of cortico-striatal synapses - Nature Communications
The basic features of dopamine release sites are still largely unknown. Here, the authors determine the ultrastructure of fluorescent dopaminergic and glutamatergic synaptosomes in mouse striatum usin...
https://www.nature.com/articles/s41467-025-66355-x
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26
8
reposted by
Kihara Laboratory
7 months ago
December Update of DAQ-Score DB! Quality evaluations of protein models from cryo-EM. Now includes evaluation of 258,956 protein chains. Check at
daqdb.kiharalab.org
It's very easy to compute DAQ for your protein model. Add the validation result in your publication:
em.kiharalab.org/algorithm/da...
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10
3
reposted by
Ben Barad
7 months ago
Holy cow the Zhou lab at UCLA is cooking with Isonet 2 -
www.biorxiv.org/content/10.6...
Averaging-free direct visualization of ribosome translational state!
#teamtomo
#cryoet
2
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36
reposted by
Chi-Min Ho
7 months ago
😍 Zhou Lab on fire!!! 🔥🔥🔥
#cryoet
#teamtomo
add a skeleton here at some point
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12
3
reposted by
Sven T. Stripp
7 months ago
Love the caption of Fig. 3 in this impressive preprint: "A Goodsell-esque 3D orthogonal rendering of an IsoNet2-processed FIB-milled tomogram of C. reinhardtii"
doi.org/10.64898/202...
Since I am no expert, what does the cryoET community think of IsoNet?
@cellarchlab.com
doi.org/10.1038/s414...
3
67
16
reposted by
cryoEM papers
7 months ago
IsoNet2 determines cellular structures at submolecular resolution without averaging
www.biorxiv.org/content/10.64898/2025.12.09.693325v1
#cryoem
0
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Many thanks to
@cellpress.bsky.social
for highlighting our
#cryoEM
research:
cell.com/structure/fu...
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Our authors in 2025
As 2025 comes to an end, we want to highlight some of the rising young faculty members who have published their exciting work from different areas of structural biology in Structure this year. We have...
https://cell.com/structure/fulltext/S0969-2126(25)00441-1
7 months ago
0
3
0
reposted by
Richard Held
7 months ago
I wrote a bit about practical considerations for using
#cryo-ET
labels and some things to work on if we want to find any protein in any cell.
authors.elsevier.com/a/1mA6h,LqAr...
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https://authors.elsevier.com/a/1mA6h,LqArXr1S
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15
4
reposted by
Alan Brown
8 months ago
Delighted to have contributed to this paper and amazing resource. In-silico protein-protein interaction screening has huge promise for generating novel hypotheses and building models into low-res
#cryo-EM
and
#teamtomo
maps.
add a skeleton here at some point
0
16
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reposted by
cryoEM papers
8 months ago
Seeing is believing-Plasmodium falciparum translation in action
pubmed.ncbi.nlm.nih.gov/41202797/
#cryoem
0
7
4
reposted by
Cornelius Gati
8 months ago
Excited to share our latest
@nature.com
: How does naloxone (Narcan) stop an opioid overdose? We determined the first GDP-bound μ-opioid receptor–G protein structures and found naloxone traps a novel "latent” state, preventing GDP release and G protein activation.💊🧪 🧵👇
www.nature.com/articles/s41...
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reposted by
Harry Low’s Lab
8 months ago
Please RT. Post-doc opportunity alert! 💥 closing 10th December.. Come join our team (
www.thelowlab.org
) at Imperial, London, working on the structure and mechanism of bacterial secretion systems. For more details and to apply please see
www.imperial.ac.uk/jobs/search-...
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reposted by
Chi-Min Ho
9 months ago
Learn how our hunt for the native structure of top antimalarial target PfATP4🧂led to the discovery of PfABP, an unknown essential binding partner, out now!
@natcomms.nature.com
👉
rdcu.be/eLRlH
🦠🔬❄️ A team effort led by
@mehsehret.bsky.social
& Anurag Shukla
@akhilvaidya.bsky.social
!
#cryoEM
#malaria
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Endogenous structure of antimalarial target PfATP4 reveals an apicomplexan-specific P-type ATPase modulator
Nature Communications - Here, the authors present the 3.7 Å cryoEM structure of native sodium efflux pump PfATP4 from Plasmodium falciparum, revealing a bound protein that they term...
https://rdcu.be/eLRlH
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reposted by
Sternberg Lab
9 months ago
1/10 Genome maintenance by telomerase is a fundamental process in nearly all eukaryotes. But where does it come from? Today, we report the discovery of telomerase homologs in a family of antiviral RTs, revealing an unexpected evolutionary origin in bacteria.
www.biorxiv.org/content/10.1...
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Antiviral reverse transcriptases reveal the evolutionary origin of telomerase
Defense-associated reverse transcriptases (DRTs) employ diverse and distinctive mechanisms of cDNA synthesis to protect bacteria against viral infection. However, much of DRT family diversity remains ...
https://www.biorxiv.org/content/10.1101/2025.10.16.682844v1
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reposted by
Giuseppe Di Caprio
9 months ago
A beautiful piece of work from
@ruixuan3.bsky.social
and
@supgokul.bsky.social
presenting a light-based slicing method using a photosensitive hydrogel to image large biological samples layer by layer, preserving fine structure for full 3D reconstructions.
add a skeleton here at some point
1
7
1
As ever, beautiful
#cryoEM
work from the lab of Hong Zhou with field-defining insights using
#cryoET
: “Kiss-shrink-run” unifies mechanisms for synaptic vesicle exocytosis and hyperfast recycling | Science
www.science.org/doi/10.1126/...
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“Kiss-shrink-run” unifies mechanisms for synaptic vesicle exocytosis and hyperfast recycling
Synaptic vesicle (SV) exocytosis underpins neuronal communication, yet its nanoscale dynamics remain poorly understood owing to limitations in visualizing rapid events in situ. Here, we used optogenet...
https://www.science.org/doi/10.1126/science.ads7954
9 months ago
0
26
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reposted by
Piotr Draczkowski
9 months ago
If you're curious about how cells quickly eliminate misfolded proteins produced under proteotoxic stress or mitotic substrate during cell cycle progression, check out our latest article in Nature Communications:
doi.org/10.1038/s414...
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Structural basis of K11/K48-branched ubiquitin chain recognition by the human 26S proteasome - Nature Communications
K11/K48 branched ubiquitin chains regulate protein degradation and cell cycle progression. Here, the authors report the structural basis of how such a branched ubiquitin chain is recognized by the hum...
https://doi.org/10.1038/s41467-025-64719-x
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16
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reposted by
joe dobbs
9 months ago
Check out our preprint! With new molecular mechanisms, 140 subtomogram averages, and ~600 annotated cells under different conditions, we
@embl.org
were able to describe bacterial populations with in-cell
#cryoET
. And there’s a surprise at the end 🕵️
www.biorxiv.org/content/10.1...
#teamtomo
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reposted by
André Nadler
9 months ago
Lipid imaging on the cover of
@nature.com
! Great times for lipid cell biology indeed. And a fantastic recognition of all the hard work by the team, especially Juan M. Iglesias-Artola and Kristin Böhlig (who made the cover). Link to article:
www.nature.com/articles/s41...
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168
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reposted by
cryoEM papers
9 months ago
Ballistic Microscopy (BaM)
www.biorxiv.org/content/10.1101/2025.10.07.681030v1
#cryoem
0
7
3
reposted by
eLife
9 months ago
High-resolution
#CryoET
provides ‘compelling’ evidence for the true 3D architecture of glutamatergic synapses: a complex ‘synaptoplasm’ rather than the textbook postsynaptic density.
buff.ly/hOYKjHH
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