joe dobbs
@joedobbs.bsky.social
📤 171
📥 188
📝 21
structural cell biologist 🇨🇦
pinned post!
Check out our preprint! With new molecular mechanisms, 140 subtomogram averages, and ~600 annotated cells under different conditions, we
@embl.org
were able to describe bacterial populations with in-cell
#cryoET
. And there’s a surprise at the end 🕵️
www.biorxiv.org/content/10.1...
#teamtomo
8 months ago
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Super cool cryo-ET work from my colleague Xiaohan resolving a ton of ribosome assembly intermediates in the nuclei of human cells!
add a skeleton here at some point
12 days ago
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reposted by
joe dobbs
Dimitry Tegunov
about 1 month ago
We're super excited to share MissAlignment: a new ML-based approach to reference-free tilt series alignment, spearheaded by
@martenchaillet.bsky.social
. We think it's going to make your cryo-ET life a lot better. Preprint:
www.biorxiv.org/content/10.6...
Code:
github.com/warpem/miss-...
🧶 Thread:
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Big news for correlative cryogenic SMLM/ET! With my colleague Soheil, we (Mahamid and
@jonasries.bsky.social
labs) indicate lamella-specific illumination can allow 500-1500x higher laser intensities, opening massive new possibilities for correlative imaging
#teamtomo
www.biorxiv.org/content/10.6...
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about 2 months ago
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We
@embl.org
wrote a short preprint about optimizing for maximum completeness in
#cryoet
analysis. We looked at template matching, VPP imaging, and tilt-series refinement parameters, and why averaging ribosomes helps even if you aren’t interested in their biology 🏭
www.biorxiv.org/content/10.6...
2 months ago
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Really excellent work by the bluesky-less Marie and Sara +coauthors in our lab
@embl.org
! Check it out for cool combinations of light microscopy and
#cryoET
, and if you're interested in how yeasts reorganize structurally in response to stressors.
#teamtomo
add a skeleton here at some point
6 months ago
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reposted by
joe dobbs
EMBL
6 months ago
Congratulations, Julia Mahamid! Julia Mahamid receives the
@dfg.de
Leibniz Prize for her work on structural cell biology!
#LeibnizPreis
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Check out our preprint! With new molecular mechanisms, 140 subtomogram averages, and ~600 annotated cells under different conditions, we
@embl.org
were able to describe bacterial populations with in-cell
#cryoET
. And there’s a surprise at the end 🕵️
www.biorxiv.org/content/10.1...
#teamtomo
8 months ago
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reposted by
joe dobbs
Jenny Sachweh
10 months ago
My PhD paper is in press
@cellpress.bsky.social
and now online:
www.sciencedirect.com/science/arti...
! Contents: weird
#NPCs
in yeast and flies,
#CLEM
, in situ
#cryoET
and more! Made possible by the amazing
@becklab.bsky.social
team at
@mpibp.bsky.social
and collaborators!
#TeamTomo
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The small GTPase Ran defines nuclear pore complex asymmetry
Nuclear pore complexes (NPCs) bridge across the nuclear envelope and mediate nucleocytoplasmic exchange. They consist of hundreds of nucleoporin build…
https://www.sciencedirect.com/science/article/pii/S0092867425008141
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New paper from my colleague Soheil in the Mahamid and
@jonasries.bsky.social
groups looking at factors influencing laser devitrification on frozen
#cryoem
samples. With a far-red fluorophore, all-gold support grids will be especially good for correlative cryo-SMLM and EM!
doi.org/10.1016/j.js...
11 months ago
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reposted by
joe dobbs
Rasmus Jensen
about 1 year ago
Are you into cryo-ET, in-cell discovery, protein translocation and folding or just cool integration of structural biology, proteomics and bioinformatics? Then see our new work:
www.biorxiv.org/content/10.1..
. Thank you to all coauthors for your amazing work!
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