Danielle Grotjahn
@nanigrotjahn.bsky.social
📤 1382
📥 738
📝 34
Associate prof @ Scripps Research grotjahnlab.org
#teamtomo
#mitochondriac
pinned post!
🚨New preprint!🚨
#teamtomo
We expanded Surface Morphometrics to quantify membrane thickness from cryo-ET—revealing local variation across organelles. Led by the lab’s first grad student,
@mmedina300kv.bsky.social
(defending Monday! 🍾) w/
@attychang.bsky.social
@hamid13r.bsky.social
&
@tomo.science
add a skeleton here at some point
6 months ago
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Danielle Grotjahn
Nitish Dua
14 days ago
Exciting !
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Danielle Grotjahn
Australian Society for Biochemistry and Molecular Biology - 2025
about 1 month ago
Thank you to all of our plenary speakers for sharing your incredible research with us at
#ASBMB2025
!
@nanigrotjahn.bsky.social
@ajknights7.bsky.social
Michelle Haber and Randal Halfmann. We have loved having you all in Brisbane and hearing about your labs awesome work! 🦠🧬🧪🧫🔬
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Guenter Resch
about 2 months ago
Happy to announce "Technical Innovations Using
#SerialEM
: A Community Meeting", a new format of hybrid meeting David Mastronarde and I are organizing in April 2026. For more info, a preliminary list of speakers, pre-registration etc. visit
www.nexperion.net/semcm2026
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Dovile Januliene
about 2 months ago
What an inspiring few days at the
#WEHeraeusSeminar
! Great science, lively discussions, and lots of fun with the amazing community of
#cryoEM
,
#StructuralBiology
&
#Microscopy
. Huge thanks to everyone!
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Danielle Grotjahn
Dovile Januliene
about 2 months ago
We all love colours, especially, when they can be generated automatically! Fantastic talk by Danielle Grotjahn
@nanigrotjahn.bsky.social
linking method development, structural biology and cell biology!
#WEHeraeusSeminar
#cryoEM
#StructuralBiology
#Microscopy
@arnemoeller.bsky.social
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Excited to travel to Germany 🇩🇪 for the WE-Heraeus-Seminar: Cryo‐EM on the Move: New Applications and Challenges! ❄️🔬🧊 I look forward to hearing what everyone is cooking up to make cryoEM better 📈 faster 🏃♀️ stronger 💪 😎
www.we-heraeus-stiftung.de/veranstaltun...
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Wilhelm und Else Heraeus-Stiftung: Main
https://www.we-heraeus-stiftung.de/veranstaltungen/cryo-em-on-the-move-new-applications-and-challenges/main/
2 months ago
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🚨
#teamtomo!🚨
Did you know there's a dedicated cryoEM/ET Mini-Symposium at the upcoming ASCB/EMBO meeting in Philly (Dec 6–10)??
3 months ago
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Ending the week on a high note in SLC with a visit to
@uofubiochem.bsky.social
after an inspiring M&M 2025 meeting!
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3 months ago
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I have lots of opinions—but for your sake, I’ve limited them to segmentation in cryo-ET for this article 😉
www.sciencedirect.com/science/arti...
#teamtomo
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Segmenting cryo-electron tomography data: Extracting models from cellular landscapes
Cryo-electron tomography provides an unprecedented view of cellular architecture, yet extracting meaningful biological insights remains challenging. S…
https://www.sciencedirect.com/science/article/pii/S0959440X25001320
4 months ago
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Will Wan
4 months ago
Happy to say that my Current Opinion in Structural Biology article came out today. I hope it helps to guide to you in using cryo-ET to make new biological discoveries!
www.sciencedirect.com/science/arti...
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A practical look at cryo-electron tomography image processing: Key considerations for new biological discoveries
Cryo-electron tomography (cryo-ET) enables 3D visualization of complex biological environments without the need for purification, thereby preserving t…
https://www.sciencedirect.com/science/article/pii/S0959440X25001344
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Danielle Grotjahn
Wiseman Lab
5 months ago
New work from the lab (w/
@preronabora.bsky.social
@mashiatzaman.bsky.social
@mitomorph.bsky.social
@nanigrotjahn.bsky.social
) identifying a compound that activates OMA1-DELE1-HRI signaling to induce mitochondrial remodeling in MFN2-deficient cells. Check it out 👇
www.biorxiv.org/content/10.1...
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Drug Repurposing Screen Identifies an HRI Activating Compound that Promotes Adaptive Mitochondrial Remodeling in MFN2-deficient Cells
Pathogenic variants in the mitochondrial outer membrane GTPase MFN2 cause the peripheral neuropathy Charcot-Marie-Tooth Type 2A (CMT2A). These mutations disrupt MFN2-dependent regulation of diverse as...
https://www.biorxiv.org/content/10.1101/2025.06.23.660251v1
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Danielle Grotjahn
Ardem Patapoutian
5 months ago
I spoke with Jade Hindmon, host of
@kpbssandiego.bsky.social
Midday Edition, about the consequences of the current administration’s cuts to science funding. Please share to help spread the word and raise awareness.
www.kpbs.org/podcasts/kpb...
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Nobel laureate on how Trump's cuts are hurting science
Neuroscientist, biologist and 2021 Nobel Prize winner Ardem Patapoutian joined Midday Edition to talk about how the Trump administration's effort to cut back on science spending is impacting researche...
https://www.kpbs.org/podcasts/kpbs-midday-edition/nobel-laureate-on-how-trumps-cuts-are-hurting-science
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Nina Turner
5 months ago
As we approach the week leading up to Juneteenth, it’s important to recognize the flag and symbols around the day, as well as taking the opportunity to renew the call for lineage-based reparations for not only chattel slavery, but the harms inflicted upon Black Americans post-emancipation.
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It’s been a big week for the Grotjahn Lab—our very first graduate student,
@mmedina300kv.bsky.social
, successfully defended her PhD thesis! 🎉 So proud of everything she’s accomplished and grateful for the light she’s brought to our lab from day one ☀️⚡
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6 months ago
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Tying self-worth to academic success, only to ask years later, "who am I, really?" Grateful
@frezzalab.bsky.social
took the time to capture this tension so beautifully in this article.
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6 months ago
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Danielle Grotjahn
Michaela Medina
6 months ago
So excited for this work to be out!! Thanks to
@attychang.bsky.social
,
@hamid13r.bsky.social
, blue sky less Daniel Fuentes,
@nanigrotjahn.bsky.social
and
@tomo.science
!!!
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🚨New preprint!🚨
#teamtomo
We expanded Surface Morphometrics to quantify membrane thickness from cryo-ET—revealing local variation across organelles. Led by the lab’s first grad student,
@mmedina300kv.bsky.social
(defending Monday! 🍾) w/
@attychang.bsky.social
@hamid13r.bsky.social
&
@tomo.science
add a skeleton here at some point
6 months ago
5
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reposted by
Danielle Grotjahn
Atty (Ya-Ting) Chang
7 months ago
Feeling so honored and thrilled to see our work make it to the cover—what a milestone in my career! I can’t wait to receive the poster from JCB🤩
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Danielle Grotjahn
Rockefeller University Press
7 months ago
@jcb.org
's April issue is here!
rupress.org/jcb/issue/22...
The cover shows a segmented model of cytoplasmic
#ribosomes
associated with mitochondrial membrane in a Saccharomyces cerevisiae cell. From Ya-Ting Chang,
@nanigrotjahn.bsky.social
and colleagues (
doi.org/10.1083/jcb....
)
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I know print journals aren't exactly on everyone's radar these days, but we’re still geeking out that our latest study—led by the brilliant
@attychang.bsky.social
—landed the cover of the April issue of JCB! 🤩
@zidlab.bsky.social
@tomo.science
@hamid13r.bsky.social
add a skeleton here at some point
7 months ago
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Danielle Grotjahn
Journal of Cell Biology
8 months ago
Cytoplasmic
#ribosomes
on
#mitochondria
alter the local membrane environment for protein import, say Ya-Ting Chang, Danielle Grotjahn (
@nanigrotjahn.bsky.social
)
@scripps.edu
and colleagues:
rupress.org/jcb/article/...
#ProteinHomeostasis
#Organelles
#StructuralBiology
#CryoET
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Danielle Grotjahn
Austin E. Y. T. Lefebvre
9 months ago
Do you LOVE organelles?? Well I am THRILLED to announce that Nellie has been published in
@naturemethods.bsky.social
! Nellie a fully automated pipeline for organelle segmentation, tracking, and hierarchical feature extraction in 2D, 3D, timelapse, multichannel live-cell microscopy 🧵1/N
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Journal of Cell Biology
8 months ago
Ya-Ting Chang,
@nanigrotjahn.bsky.social
et al.
@scripps.edu
present a membrane-guided approach for identifying a subset of cytoplasmic
#ribosomes
oriented for protein import on the surface of
#mitochondria
in budding yeast using
#cryoET
:
rupress.org/jcb/article/...
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Danielle Grotjahn
Ben Barad
8 months ago
Happy to share that the final version of record for our (
@nanigrotjahn.bsky.social
)
#teamtomo
mitochondrial cotranslation story is online at
@jcb.org
! We combined STA with surface morphometrics to learn how ribosomes bind to and alter mitochondrial membranes in yeast.
rupress.org/jcb/article/...
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For
#teamtomo
, context is everything. We highlight the power of
#surfacemorphometrics
in guiding STA and quantitatively assessing the impact of these structures on the local environment. 1st collab paper w/
@zidlab.bsky.social
(hopefully many more to come!)
@tomo.science
@hamid13r.bsky.social
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8 months ago
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🚨Members of
#teamtomo!🚨
We invite you to submit abstracts to our ❄️🔬Cryo-electron Tomography: Progress and Potential session at Microscopy & Microanalysis (M&M) 2025! sample prep, data processing, structural biology, cell biology —we want to hear from you! DEADLINE: February 18
@tomo.science
9 months ago
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looking forward to my first trip to Australia for this exciting conference!
#teamtomo
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10 months ago
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Danielle Grotjahn
RCSB Protein Data Bank
10 months ago
After a remarkable 300 columns, David Goodsell has retired from the Molecule of the Month. We are very grateful for his service. @jiwasa.bsky.social will continue the series, beginning with January's article on Assembly Line Polyketide Synthases Details:
cdn.rcsb.org/rcsb-pd...
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EDUCATION CORNER: Molecule of the Month: Celebrating 25 Years of Storytelling and Announcing New Beginnings
After a remarkable 300 columns, David Goodsell has retired from the Molecule of the Month series. Janet Iwasa will be continuing the series for PDB-101.
https://cdn.rcsb.org/rcsb-pdb/general_information/news_publications/newsletters/2025q1/corner.html
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Danielle Grotjahn
Mark Peifer (He, him)
10 months ago
At the heart of biology is the mantra: structure dictates function.Biological structures are also beautiful in their intricacy. David Goodsell brought this into public view. As he leaves "Molecule of the Month". here's a huge thank you for helping me see more clearly🧪1/2
cdn.rcsb.org/rcsb-pdb/gen...
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Danielle Grotjahn
SBGrid Consortium
10 months ago
Our December member tale spotlights
@lukechao.bsky.social
of MGH, who uses in vitro techniques, cryo-ET, & an evolutionary lens to understand the pasta geometries of mitochondrial crista. Read more here:
https://buff.ly/40ef6XY
#StayConnected
#ScienceMatters
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SBGrid Consortium - Member Tale - Luke Chao - Massachusetts General Hospital
The SBGrid Consortium is an innovative global research computing group operated out of Harvard Medical School. SBGrid provides the global structural biology community with support for research…
https://buff.ly/40ef6XY
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Danielle Grotjahn
Tristan Bepler
11 months ago
A flexible framework for fast and accurate segmentation of filaments and membranes in tomograms and micrographs - the TARDIS manuscript is now live
@biorxivpreprint.bsky.social
! Thanks to hard work by Robert Kiewisz and our many collaborators!
www.biorxiv.org/content/10.1...
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Accurate and fast segmentation of filaments and membranes in micrographs and tomograms with TARDIS
It is now possible to generate large volumes of high-quality images of biomolecules at near-atomic resolution and in near-native states using cryogenic electron microscopy/electron tomography (Cryo-EM...
https://www.biorxiv.org/content/10.1101/2024.12.19.629196v1
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Danielle Grotjahn
Scripps Research
11 months ago
Season 7 of our Front Row Lecture Series celebrated Scripps Research’s centennial with groundbreaking talks from our world-class scientists. 🌟 From neuroscience to global health, here’s a look at the remarkable discoveries shaping the future of science and medicine. ⬇️ (1/10)
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Danielle Grotjahn
Scripps Research
11 months ago
@nanigrotjahn.bsky.social
, PhD, unveiled how mitochondria—our cells’ ‘powerhouses’—act as stress sensors, shaping cellular health and contributing to diseases like cancer and neurodegeneration. Her work uses cutting-edge imaging to unlock these secrets. (9/10)
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Labs that clay together, stay together 🩶🌪️🥣
@hamid13r.bsky.social
@mmedina300kv.bsky.social
@callmemich.bsky.social
@nitishdua.bsky.social
12 months ago
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Danielle Grotjahn
Scripps Research
12 months ago
As assistant professor
@nanigrotjahn.bsky.social
has proven, mitochondria are more than ‘powerhouses’—they’re vital stress sensors. In our final Front Row lecture of the year, Grotjahn revealed how their changing shapes could signal health or disease. Watch now:
ow.ly/wLjR50U7mtE
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Thrilled for the chance to share two of my scientific passions: microscopes and mitochondria!
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12 months ago
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✈️ Boarding my flight to 🇪🇸 to meet up with my fellow mitochondriacs for this exciting conference!
over 1 year ago
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Happy Scripps Research Day from our lab to yours! #100yearsofScrippsResearch
over 1 year ago
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When your 🧬reverse complement🧬 one of your scientific role models!
@bcarra.bsky.social
#throwbackthursday
almost 2 years ago
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🚨 Structural and Computational Biologists🚨 Join our vibrant community at Scripps! We offer a blend of: 👩🔬🧪📊Innovative science 🧬🔬🦠Cross-department collabs ☀️🌞🌈Perfect weather 🏖️🩴🌴Pristine beaches 🌮🐟🌯Yummy fish tacos DM me for Qs/deets!
apply.interfolio.com/130878
almost 2 years ago
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