🌱 2x David Sainsbury Career Development Fellowships at @slcuplants.bsky.social Launch your first independent research group in quantitative plant development, with generous support & world-class facilities. Deadline extended to 30 Jan 2026 www.cam.ac.uk/jobs/david-s... #plantscijobs 1/4🧵

Preprint out! By controlling growth, via RNAP, we control the entire cellular machinery, and tune the cellular context into distinct, stable states. See how NOT gates behave! Kudos to @angeles-hg.bsky.social and @mirobueno.bsky.social 🔗https://www.biorxiv.org/content/10.64898/2025.12.19.695408v1

Reminder - a great job opportunity at @ucdavis.bsky.social Dean, College of Biological Sciences jobs.sciencecareers.org/job/676649/d...

Aspect Ratio as Driver of Bacterial Competition! Our latest work uncovers this simple and powerful determinant of bacterial competition. We demonstrate that longer bacteria consistently dominate colony fronts—even when outnumbered. The mechanism? Collective alignment. www.nature.com/articles/s41...

Thrilled to share that my first-author paper is now published in Nature Communications! 🎉 Huge thanks to my PI, Dr. Drew Bridges (@bridgesbio.bsky.social), my collaborators, and all the incredible lab members for their support throughout this project www.nature.com/articles/s41...

#microsky #phagesky The 3rd (? Lost track!) manuscript on a CRISPR/anti-CRISPR -based transposon tool to study gene essentiality in #phages www.biorxiv.org/content/10.6...

Manchester Institute of Biotechnology is looking for a new Professor. There are a few priority areas including microbial engineering (broadly defined, from pathways to cells to microbiomes). Closing 12 Jan. Join us in the best city in the UK 😜 www.jobs.manchester.ac.uk/Job/JobDetai...

Looking for a POSTDOC to work on jumbo phages (those with large genomes and fascinating cell biology), using our latest ASO technology (Gerovac M et al. 2025 Nature) to define RNA export mechanisms as well as to help to advance phage therapy. Here's the job ad.

Late job posting: My department is hiring a tenure-track faculty member in microbiology! Please share with anyone interested in working at a PUI. We have a preference for someone who can teach Medical Microbiology, but other than that the focus is open-ended. Happy to answer qs.

(1/n) What if you never had to make your bed? What if your laundry could fold itself? Folding is everywhere around us - but did you know that folding flat sheets are at the ❤️ of diversity of shapes in the animal world - since 500 million years ago. Our latest work: www.youtube.com/watch?v=nudC...

Preprint alert📢! 
Ever wondered how much bacterial parasites influence evolutionary outcomes of their host? ➡️ We co-evolved two bacterial strains in conditions in which the costs and benefits of prophage carriage varied Here is what we found. 
www.biorxiv.org/content/10.6... 
#MicroSky #PhageSky 🧵

Our preprint on predicting drug resistance in bacteria is now out in @plosbiology.org. We show ignoring phylogenetic structure in genome collections leads to overly optimistic evaluations of machine learning methods for AMR prediction. Work from @yanyingyu.bsky.social with @nwheeler443.bsky.social.

If you missed the 2025 @isbscience.org Virtual Microbiome Symposium (theme: how microbial metabolites influence the brain, the immune system, & metabolism), the videos of the talks and the panel discussion are now available here: youtube.com/playlist?lis... Thanks to all who helped make it happen!

Early career science journalists: Need something to do next summer? Apply to work with me as @science.org's newsletter intern! bit.ly/44yCu4o

Beautiful work from Jay Winans in the Nadell Lab @dartmouthartsci.bsky.social showing IncF plasmid pED208 spreading like wildfire through E. coli biofilms www.cell.com/current-biol...

A synthetic cell phage cycle | Nature Communications https://www.nature.com/articles/s41467-025-67249-8

Permanent Research Group Leader Position, Crete, Greece: Interested to assume long-term responsibilities for the Biodiversity Computing Group www.biocomp.gr I have set up in Crete? Apply now via apella.minedu.gov.gr/en/node/5998 (PDF also in English) - for questions email to [email protected]

Happy to share that our work on HLp, a bacterial histone from Leptospira perolatii, is now published in Nature Communications 🎉 In this study, we show that HLp forms stable tetramers that wrap ~60 bp of DNA, revealing a distinct histone–DNA organization in bacteria. www.nature.com/articles/s41...

Now available online: the new 2.0 version of gutSMASH, with capabilities to detect 12 new types of catabolic gene clusters relevant to gut microbiome ecology, as well as predictions of their regulation through transcription factor binding site detection. www.sciencedirect.com/science/arti...

Microbial eukaryotes keep challenging assumptions about eukaryotic cell and genome biology. Our upcoming workshop explores the frontier of protist genomics and how it shapes cell biology, ecology and evolution. Please save the date! Talks, posters and ECR events Websites and details coming soon

🚨New faculty job opportunity 🚨 Please share this ad for a faculty position in our department at UC Irvine, in the fields of microbiology and infectious disease. MD/PhDs and PhDs are desired and should apply! recruit.ap.uci.edu/JPF09954

The 2026 Guarda Summer Course in Evolutionary Biology is now accepting applications. Amazing place, amazing course, amazing opportunity for early grad students. tb.ethz.ch/education/gu...

Happy to share that I’m opening my lab at the Weizmann Institute of Science! We’ll study systems-level regulation of bacterial defense, driven by RNA-protein interactions shaping cell fate. Now recruiting PhD students & postdocs tinyurl.com/4yfa55vd Please reach out and share!

Exciting pre-print on new variants of anti-phage defense systems including CBASS, Pycsar, and Gabija! www.biorxiv.org/content/10.6...

✨New preprint! 🧵1/4 Excited to share our work on AI-guided design of minimal RNA-guided nucleases. Amazing work by @petrskopintsev.bsky.social @isabelesain.bsky.social @evandeturk.bsky.social et al! Multi-lab collaboration @banfieldlab.bsky.social @jhdcate.bsky.social @jacobsenucla.bsky.social🧬 🔗👇

🚀 We're hiring! We are offering several exciting #PhD & #postdoc positions spanning a range of topics, from jumbo phage biology & phage therapy to programmable RNA therapeutics & Fusobacterium nucleatum research. The application deadline is Jan 11. Learn more: www.helmholtz-hiri.de/en/jobs-tale...

Confused by all the histones that are cropping up in organisms that are decidedly NOT eukaryotes? check out our review - fantastic work by team NucEvo in the #Lugerlab The Expanding Histone Universe: Histone-Based DNA Organization in Noneukaryotic Organisms - www.annualreviews.org/content/jour...

in a week, I'll start reviewing applications for this postdoc. come work with me in Santa Cruz, CA on fitting Bayesian hierarchical models to whale tag and photo datasets. position starts in fall 2026. ask me questions and apply here: recruit.ucsc.edu/JPF02003

🔬 Call to create junior research groups at the Institut Pasteur Focus: Infectious diseases, host-microbe interactions, vaccines Special interest: AI methodologies 📅 Deadline: Feb 9, 2026 👥 2-12 years post-PhD Apply now 📝 research.pasteur.fr/en/call/crea... #JobOpportunity #Research

Phages are full of genes of unknown function that are likely adaptive in specific conditions. New preprint: Phage TnSeq identifies essential genes rapidly and knocks all non-essentials. We would like to send a pool of phiKZ mutants to anyone wanting it! Reach out tinyurl.com/bdcfrejh

KlebPhaCol: a community-driven resource for Klebsiella research identified a novel phage family #phage #phagesky Amazing effort by @fnobrega.bsky.social lab academic.oup.com/nar/article/...

We have an open call for a group leader at the Rudolf Virchow Center for Integrative and Translational Bioimaging in Würzburg, Germany. Generous starting package, vibrant and highly interdisciplinary biomedical research environment. www.nature.com/naturecareer... Please spread the word.

Opening of a Group Leader position in AI in genomics at Institut Pasteur @pasteur.fr , Paris research.pasteur.fr/en/call/mid-...

Our paper on polymyxin interacting with the E. coli outer membrane is out! Simulations by the very talented @dheerajprakaash.bsky.social www.nature.com/articles/s42... To scale outer membrane protein island simulated at coarse-grained resolution with portions refined at all atom resolution.

#microsky 😳 www.cell.com/cell-host-mi...

#microsky #phagesky #phge defence Preprint from the @soreklab.bsky.social reporting a plethora of novel TIR-based immune signalling systems www.biorxiv.org/content/10.6...

Amazing dataset describing the metabolic profiles of 66 E. coli transporter knockouts by @sulheim.bsky.social with Peter Doubleday and @nzamboni.bsky.social. The tool, set up by @lambdapp.bsky.social and Eric Ulrich allows you to explore for yourself. Enjoy! Pre-print here: doi.org/10.1101/2025...

🦠🧪🧬🚨 New paper and database alert: the new IMG/VR release is now MetaVR ! We have a new website - meta-virome.org - with quick search capabilities for the >24M viruses, >12M vOTUs, and >42M protein clusters (including >790k with predicted structures !). academic.oup.com/nar/advance-...

CryoET of microbes inside an animal organ? Yes it’s possible! Check out our new preprint showing how we did it! What an amazing collaboration with amazing scientists who made this possible!

New preprint from our lab www.biorxiv.org/content/10.1...! Andrea Dos Santos and Clément Vulin combine experiments and models showing how adding glucose can strengthen negative interactions between microbial species. This can be used in tandem with antibiotic treatment to inhibit pathogens!

🚨 We are hiring a group leader in Virology at CIRI ! Join us in the beautiful city of Lyon 🇫🇷 Deadline on March 31st 2026

Huge preprint if you are interested in bacterial strain taxonomy! The why and how of cgMLST LIN codes: An extensively revised and expanded version doi.org/10.1101/2024... I will summarize it for you in this thread 👇

Check out our latest paper on mirusviruses, one of the most remarkable new groups of protist viruses - extremely diverse, carry lots of spliceosomal introns (including new homing introns) and are at the evolutionary crossroads between tailed phages and herpesviruses! www.nature.com/articles/s41...

#microsky #phagesky #phage #virus academic.oup.com/nar/advance-...

#OpenCloning is a an Open Source alternative to SnapGene/Benchling that supports automation and integration with other software ✅ Free 🔓 Open Source 🧬 More cloning methods than SnapGene 🤖 Can be automated with python 👨‍🔬 Built by a researcher — for researchers! 👉 Check it out at opencloning.org

Long read Metagenomics, #phage and #prophage in the gut by Ami Bhatt's group. Beautiful data showing changes in phages over two years #phagesky www.nature.com/articles/s41...

PhD Opportunity: Advance UTI treatment with on-chip tech! 🔬🧫 Work at the microbiology-bioengineering interface with Hywel Morgan, @fnobrega.bsky.social and me. Program EPSRC/MOD CISDnS CDT cisdns-cdt.ac.uk Co-funded by IfLS Southampton tinyurl.com/infoUTI tinyurl.com/applyUTI Deadline: 8 Dec 2025

Very excited to share a big part of my dissertation work with the Deutschbauer lab at LBNL and @ucberkeleyofficial.bsky.social! BarTn7: A method for bacterial lineage tracking at sub-species resolution in population, ecological, and evolutionary experiments. www.biorxiv.org/content/10.1...

Now online at @cp-cellhostmicrobe.bsky.social from co-first authors @erinedoherty.bsky.social & @jnoms.bsky.social