Brandon Chen, PhD
@brandontwchen.bsky.social
📤 814
📥 707
📝 30
NCI K99 postdoc with Kivanç Birsoy | Inter-organellar metabolic communication, cancer metabolism
reposted by
Brandon Chen, PhD
Artem Khan
2 months ago
The link to our paper:
dlvr.it/TP5gK5
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Machine-learning-guided discovery of SLC25A45 as a mediator of mitochondrial methylated amino acid import and carnitine synthesis
Khan et al. apply machine learning to identify substrates of UNC93A, SLC45A4, and SLC25A45. Biochemical assays and in vivo metabolite tracing establish SLC25A45 as a key mediator of mitochondrial impo...
https://dlvr.it/TP5gK5
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reposted by
Brandon Chen, PhD
Artem Khan
2 months ago
Also thanks to Zachary Sebo and Navdeep Chandel for writing a preview to our work as well as a complementary study from Thomas MacVicar's lab
www.cell.com/molecular-ce...
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An orphan no more: SLC25A45 controls mitochondrial import of methylated amino acids
Solute carrier (SLC) genes encode the largest membrane transporter superfamily, with many orphan members of unknown function. In recent Cell Metabolism and Molecular Cell articles, Khan et al. and Dia...
https://www.cell.com/molecular-cell/fulltext/S1097-2765(25)00858-5
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reposted by
Brandon Chen, PhD
Artem Khan
2 months ago
The cover depicts a GWAS Manhattan plot as a city skyline reflected onto a New York City-style subway metabolic map: organelles as boroughs, metabolites as stations, transporters as trains.
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reposted by
Brandon Chen, PhD
Artem Khan
2 months ago
Happy to see our recent work on SLC25A45 featured on the cover of
@cp-cellmetabolism.bsky.social
. Huge thanks to
@yuyangliu.bsky.social
for the design! @KivancBirsoy
@rockefeller.edu
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reposted by
Brandon Chen, PhD
Artem Khan
3 months ago
Excited to share our work on discovery of SLC25A45 as a mediator of mitochondrial methylated amino acid import and carnitine biosynthesis.
@cp-cellmetabolism.bsky.social
www.cell.com/cell-metabol...
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Machine-learning-guided discovery of SLC25A45 as a mediator of mitochondrial methylated amino acid import and carnitine synthesis
Khan et al. apply machine learning to identify substrates of UNC93A, SLC45A4, and SLC25A45. Biochemical assays and in vivo metabolite tracing establish SLC25A45 as a key mediator of mitochondrial impo...
https://www.cell.com/cell-metabolism/fulltext/S1550-4131(25)00434-6
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reposted by
Brandon Chen, PhD
Eddie Rashan
7 months ago
AND IT'S DONE! A 🧵 on our recent article now out in
@natsmb.nature.com
! Co-led with
@abbybartlett.bsky.social
, Pagliarini Lab,
@judisimcox.bsky.social
, we find ACAD10/11 are NOT like other acyl-CoA dehydrogenases and instead catabolize atypical lipids called 4-hydroxy acids 🤯
doi.org/10.1038/s415...
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ACAD10 and ACAD11 enable mammalian 4-hydroxy acid lipid catabolism - Nature Structural & Molecular Biology
Rashan, Bartlett and colleagues show that mammalian 4-hydroxy fatty acids are primarily catabolized by ACAD10 and ACAD11 (atypical mitochondrial and peroxisomal acyl-CoA dehydrogenases, respectively) ...
https://doi.org/10.1038/s41594-025-01596-4
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reposted by
Brandon Chen, PhD
Caleb Cheng
9 months ago
Beyond grateful to share that my main PhD thesis project, Targeting PIKfyve-driven lipid metabolism in pancreatic cancer (
@lyssiotislab.bsky.social
+ Arul Chinnaiyan lab), has just been published in
@nature.com
!
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Happy to share our most recent review on mitochondria-organelle metabolic communication with Yatrik Shah and Costas Lyssiotis now online at Molecular Cell! We explored aspect of lipid transfer, organelle membrane contacts, ROS, metabolites, and metals!
www.sciencedirect.com/science/arti...
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Mitochondria-organelle crosstalk in establishing compartmentalized metabolic homeostasis
Mitochondria serve as central hubs in cellular metabolism by sensing, integrating, and responding to metabolic demands. This integrative function is a…
https://www.sciencedirect.com/science/article/pii/S1097276525001960
9 months ago
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reposted by
Brandon Chen, PhD
Zen Faulkes
11 months ago
Worst week for science EVER. Sunday: ASM scrubs DEI mentions from website. Tue: NASA scrubs DEI from website; ICE arrests a student on campus; NSF plans to cut staff; USAID halted. Wed: HHMI kills diversity program; NIH trashes applications for diversity F grants. Fri: NIH cuts indirects.
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reposted by
Brandon Chen, PhD
E John Wherry
11 months ago
This will kill science in the US. This is how China wins. Why is this not on the news? Why are people not more upset about this?
grants.nih.gov/grants/guide...
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NOT-OD-25-068: Supplemental Guidance to the 2024 NIH Grants Policy Statement: Indirect Cost Rates
NIH Funding Opportunities and Notices in the NIH Guide for Grants and Contracts: Supplemental Guidance to the 2024 NIH Grants Policy Statement: Indirect Cost Rates NOT-OD-25-068. OD
https://grants.nih.gov/grants/guide/notice-files/NOT-OD-25-068.html
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reposted by
Brandon Chen, PhD
Jeremy Berg
11 months ago
A Primer on Indirect Cost Rates
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reposted by
Brandon Chen, PhD
Lyssiotis Lab
11 months ago
We are soliciting poster and short talk abstracts for the NYASciences Cancer Metabolism meeting. Just around the corner - join us for awesome metabolism in the Big Apple 🍎 Speakers: Kivanc Birsoy, Christine Chio, Marcia Haigis, Andy Intlekofer, Thales PapaG, Jared Rutter, Dan Wahl, Eileen White
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reposted by
Brandon Chen, PhD
André Nadler
12 months ago
It’s incredibly hard to study lipids in biological membranes on the nanoscale. You need near-perfect information on both membrane ultrastructure and lipid density, which usually isn’t attainable. Lipid-CLEM brought to you by
@mathilda95.bsky.social
changes that.
www.biorxiv.org/content/10.1...
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reposted by
Brandon Chen, PhD
Peter Mullen
12 months ago
Registration and abstract submissions are open for the Third Annual SoCal Metabolism Symposium at USC. Go to
gero.usc.edu/event/third-...
The abstract and early bird price deadlines are Feb 28th
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reposted by
Brandon Chen, PhD
Juan C. Landoni 🔬
12 months ago
Fresh new paper alert 🚨 by
@marcellharhai.bsky.social
@jourdainlab.bsky.social
et al. expanding the inventory of potential
#mitodisease
genes and a herculean deep-dive into FAM136A across models and human disease! 🧪🧫🐭👂 Really happy to see it out and to have played a small part 🔬
#mito
#sciencesky
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Really enjoyed writing this spotlight highlighting recent works from
@keunwooryu.bsky.social
at al in the Thompson lab along with
@lyssiotislab.bsky.social
and Yatrik Shah! Mitochondria heterogeneity FTW! --- Link below to the spotlight and the original
@nature.com
articles in the reference👇
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12 months ago
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reposted by
Brandon Chen, PhD
Trends in Endocrinology and Metabolism
12 months ago
ONLINE NOW! Subcellular mitochondrial heterogeneity enables opposing metabolic demands, by
@brandontwchen.bsky.social
, Yatrik Shah and
@lyssiotislab.bsky.social
, discussing the recent work by
@keunwooryu.bsky.social
et al. Read it for free until March 19th at:
authors.elsevier.com/a/1kWLq3jDgW...
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reposted by
Brandon Chen, PhD
Danielle L. Schmitt 🔬
12 months ago
I got home from lab and immediately called and wrote to my representative and senators. I urge you to do the same.
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reposted by
Brandon Chen, PhD
Susanne Ahmari
12 months ago
I decided to be more efficient in my doomscrolling & made my first starter-pack!😅 These are folks that IMO have been great sources of reliable info during the federal communication ban. Please 1) tell me if you want to be taken off, and 2) give suggestions for others to add
go.bsky.app/KZnq7Qe
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reposted by
Brandon Chen, PhD
Katie Mack
12 months ago
I think some people hear “grants” and think that without them, scientists and government workers just have less stuff to play with at work. But grants fund salaries for students, academics, researchers, and people who work in all areas of public service. “Pausing” grants means people don’t eat.
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White House pauses all federal grants, sparking confusion
The Trump administration has put a hold on all federal financial grants and loans, affecting tens of billions of dollars in payments.
https://www.washingtonpost.com/business/2025/01/27/white-house-pauses-federal-grants/
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reposted by
Brandon Chen, PhD
Roland Dunbrack 🏳️🌈
12 months ago
All NIH/NSF awards may be paused as of today. Money is disbursed annually, so if you have your money, you're OK for a while. My next R35 grant year starts Apr 1. I hope Trump doesn't read my X/bsky feeds that say he's a racist, a rapist, a cheat, & a traitor.
www.washingtonpost.com/business/202...
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White House pauses all federal grants, sparking confusion
The Trump administration has put a hold on all federal financial grants and loans, affecting tens of billions of dollars in payments.
https://www.washingtonpost.com/business/2025/01/27/white-house-pauses-federal-grants/
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reposted by
Brandon Chen, PhD
Dave Levitan
12 months ago
From a source inside the National Cancer Institute: “Everyone is scrambling to figure out how we’re supposed to work to serve the public when we can’t engage at all.”
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reposted by
Brandon Chen, PhD
Nancy Kanwisher
12 months ago
Academic workers across the country are organizing to call on our congressional representatives on Thursday, 1/30, at 3pm ET / 12pm PT to demand these restrictions be lifted immediately. There will be a training over zoom at the beginning of the event. Join us!
form.jotform.com/250226137228...
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Join researchers across the country in fighting restrictions on the NIH
Please click the link to complete this form.
https://form.jotform.com/250226137228047
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reposted by
Brandon Chen, PhD
Jeremy Yoder says no war
12 months ago
Reiterating my call to fellow federally-funded scientists: Call your reps, tell them how this hurts science and everything good that comes from science (Also non-scientists, and scientists without federal funding! But the more of us who can directly speak to the impacts of these freezes the better)
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reposted by
Brandon Chen, PhD
Megan Killian
12 months ago
I'm one of these 11,965, and with funding from the NIH and NSF, I've been able to recruit several more full-time employees to MI (many coming from other states!) since 2023.
@repdingell.bsky.social
, please advocate for us in science, health, and research to continue supporting the michigan economy
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Crazy that I defended on Friday! Really appreciate everything I learned from Yatrik and
@lyssiotislab.bsky.social
over the years! Can't ask for better mentors, labs, colleagues, friends, and support over the years! Next step, postdoc with Kivanc Birsoy at Rockefeller University !🧿🗽
12 months ago
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reposted by
Brandon Chen, PhD
Lyssiotis Lab
about 1 year ago
The end of an era.
@brandontwchen.bsky.social
brought us kicking & screaming into cell biology, and what an exciting journey it’s been. We are so very proud of everything he’s accomplished! Join us 1/17 for his defense. Thereafter… watch out NYC, here he comes!!
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hahahahahahaha
about 1 year ago
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reposted by
Brandon Chen, PhD
Juan C. Landoni 🔬
about 1 year ago
Stoked to share TWO preprints on mitochondrial pearling! 🎉 We uncover how spontaneous
#mitochondria
pearling drives
#mtDNA
nucleoid distribution (
doi.org/10.1101/2024...
), and
@gavsturm.bsky.social
et al. dissect the biophysics behind it (
doi.org/10.1101/2024...
). Details below! 🔬🧵🧪
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reposted by
Brandon Chen, PhD
Sebastian S. Cocioba
about 1 year ago
Come with me as I troubleshoot this very high GC PCR toward clonable homology arms in an actinobacteria. Testing DMSO, Betaine 1M, and Propylene Glycol to see if we get amplification. Arms are 1000bp. Full length with arms and gene is 2800bp. Let's go! 🧵 1/n
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reposted by
Brandon Chen, PhD
Aakriti Jain
about 1 year ago
Excited for some cool science at
#CellBio2024
this year! Come by my poster (Sun. Dec 15, 1.30-3pm Board B136) and stay for my talk (Sun. Dec 15, 4 pm Rm 33B) where I'll tell you about our work on a lysosomal mechanism for membrane protein degradation!
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reposted by
Brandon Chen, PhD
Lyssiotis Lab
about 1 year ago
If you are attending
#ASCB2024
, check out this suite of Shah/Lyssiotis Lab presentations!
@brandontwchen.bsky.social
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reposted by
Brandon Chen, PhD
Natalie Niemi
about 1 year ago
Are you going to
#ASCB2024
@ascbiology.bsky.social
? Excited to be co-chairing a session on Organelle Biogenesis, Turnover, & Quality Control with
@labfriedman.bsky.social
on Monday, 12/16. We have a fantastic line up of speakers - see you there!
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Looking forward to returning to
#CellBio2024
and present our updated work on metabolic regulation of ER-mito contact sites! Excited to meet new fiends and re-connect with my fav colleagues! link to preprint:
www.biorxiv.org/content/10.1...
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about 1 year ago
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Amazing course for someone who really wants to dive into the fascinating world of quantitative light imaging 🤩
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about 1 year ago
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reposted by
Brandon Chen, PhD
Jennifer Waters
about 1 year ago
We are so excited that
@janfunkey.bsky.social
has agreed to give the keynote seminar for
@qiatcshl.bsky.social
2025
@cshlnews.bsky.social
! 🔬🖥️ 🛤️ Applications due 1/31/2025.
t.co/x87ngy34UC
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https://meetings.cshl.edu/courses.aspx?course=C-QICM
https://t.co/x87ngy34UC
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reposted by
Brandon Chen, PhD
Lyssiotis Lab
about 1 year ago
Is BluSky ready for this much Mo? This group of Dudes is serious about Mo’s and about raising awareness for men’s mental health and cancer research 👨🏻💪🏼
#Movember
@ja-nietocarrion.bsky.social
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reposted by
Brandon Chen, PhD
Micah G. Allen
about 1 year ago
Would you like to see
@biorxivpreprint.bsky.social
add a share to blue sky button?! I know I would! Share this post to let
@richardsever.bsky.social
@erictopol.bsky.social
and others at bioarxiv know!
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reposted by
Brandon Chen, PhD
Constantin Pape
about 1 year ago
You can now watch the I2K video tutorial on
#micro-sam
by
@anwaiarchit.bsky.social
on YouTube:
www.youtube.com/watch?v=dxjU...
Check it out for an in-depth explanation for how to use our tool to segment your microscopy images.
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Segment Anything for Microscopy
YouTube video by I2K Conference
https://www.youtube.com/watch?v=dxjU4W7bCis&list=PLdA9Vgd1gxTbvxmtk9CASftUOl_XItjDN&index=33
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reposted by
Brandon Chen, PhD
Danielle L. Schmitt 🔬
about 1 year ago
Are you going to
#CellBio2024
? Be sure to check out my session Sunday morning about the future of metabolism, featuring talks from trainees (grad & postdoc) and early career faculty!
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reposted by
Brandon Chen, PhD
Mara Duncan
about 1 year ago
🧪Dear Grad student, Are you overdue for a thesis committee meeting but feel like you have nothing to show since your last meeting? I'm begging you to schedule that meeting now! 1/🧵
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reposted by
Brandon Chen, PhD
Juan C. Landoni 🔬
about 1 year ago
A tragically failed staining for
#FluorescenceFriday
, but a fun opportunity to play with
@kwolbachia.bsky.social
awesome LUTs! Can anyone recognize the structures in this bouquet? 💐
#SciSky
#AcademicSky
#FluorescentFriday
🔬 🧪 🐡 🦑
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reposted by
Brandon Chen, PhD
Avezov lab
about 1 year ago
🚨For the lucky colleagues attending
#CellBio2024
in San Diego, check out our session on 'ER structure and function across cell types' Room28C- Dec18th 09:00am! A fantastic lineup covering the latest across the field. See you there! **Please RT** 🥳
t.co/6eq3cyGlVZ
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The amount of concurrent science writing (grants, articles, reviews, dissertation) I'm doing right now at the end of grad school is kind of insane, but I'm kinda loving it. WEIRDDD
about 1 year ago
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reposted by
Brandon Chen, PhD
Rich Possemato
about 1 year ago
I’m excited to share new work out of the lab in Nature Metabolism today on the impact of tumor-relevant glucose concentrations on the response to pyrimidine synthesis inhibitors.
t.co/9hOGW4x97T
. PDF:
rdcu.be/d1vkV
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https://www.nature.com/articles/s42255-024-01166-w
https://t.co/9hOGW4x97T
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reposted by
Brandon Chen, PhD
Julia Ugras
about 1 year ago
Getting some pretty IF images done with
@mruckert.bsky.social
on the
@leicamicrosystems.bsky.social
Stellaris before Thanksgiving break 🤩🍂
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reposted by
Brandon Chen, PhD
Sonya Neal
about 1 year ago
Hello, BlueSky Universe! I'm Sonya Neal, an Associate professor at UC San Diego and HHMI Freeman Hrabowski Scholar. Proudly First-Gen, Black in STEM and passionate about paying it forward. In my people-first lab, we are driven to explore the most understudied membrane proteins
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reposted by
Brandon Chen, PhD
Itai Yanai
about 1 year ago
How to write a grant? 1. The application is for the reviewer, not you, the applicant. 2. Communicate in stories. 3. Make your story cohesive—leave no puzzling gaps. 4. Make your story resonate to keep the reviewer reading. 5. Accept chance and noise in peer-review.
www.pnas.org/doi/epub/10....
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reposted by
Brandon Chen, PhD
Walter W. Chen, MD, PhD
about 1 year ago
Hello Bluesky community! Since I’m new here, I wanted to introduce myself! I am a neonatologist and scientist studying mitochondria, peroxisomes, and metabolism (currently a postdoc in
@rjdlab.bsky.social
). A short thread of some work I have done:
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reposted by
Brandon Chen, PhD
Kevin C Klatt, PhD, RD
about 1 year ago
Building out an eclectic mix of
#nutrition
, food and
#metabolism
folks here ⬇️
bsky.app/profile/did:...
add a skeleton here at some point
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