Simon Anders
@s-anders.bsky.social
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physicist, bioinformatics / biostats researcher at University of Heidelberg
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ResistwithEllen
1 day ago
If you havent seen this, make sure you read.
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The Devil
2 days ago
Pretty obvious.
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Dr. Dave
7 days ago
As I point out regularly, because FL is one of the most primitive, regressed states in America, you cannot be elected or appointed to any office there unless you’re a thoroughly despicable and corrupt criminal.
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The Onion
9 days ago
Sam Altman: ‘If I Don’t End The World, Someone Far More Dangerous Will’
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Thraex ⚔️🏛🏺
13 days ago
"Iran has been at war with us for 40-some years" is only one step removed from "we have always been at war with Eastasia"
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Michela Palamin
17 days ago
ChromSMF preprint is out!🚀
tinyurl.com/ChromSMF
We often piece together chromatin regulation layer by layer from separate assays. But this can be limiting! In
@arnaudkr.bsky.social
's lab, we developed a method to directly study multiple layers on the same DNA molecule! 🧬 What does this unlock? ⬇️
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Ben Natan
24 days ago
So US/Proxy Forces are currently bombing or threatening to bomb: Iran Palestine Lebanon Iraq Yemen Afghanistan Russia Colombia Cuba Venezuela And I’m just wondering how long it took people to realize they were in a world war 80 years ago.
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Saez-Rodriguez Group
24 days ago
🧵 What does single-cell transcriptomics reveal about individual patients with acute (AKI) and chronic (CKD) kidney 🫘 disease? Can we use it to find new biomarkers? In our new preprint 👇, we asked this using biopsies from 150+ participants from the Kidney Precision Medicine Project.
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Trixie 🌸🇨🇦
24 days ago
“We are a defensive alliance, which means that we don’t do military attacks.” - Finland President, Alexander Stubbs I’ll translate that for you Donald, it means that NATO countries aren’t your bitches.
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biometlab
24 days ago
www.theguardian.com/environment/...
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Revealed: the world’s worst mega-leaks of methane driving global heating
Exclusive: Fixing a leak can be simple and equivalent to closing a coal power station, making lack of action maddening, say analysts
https://www.theguardian.com/environment/2026/mar/17/revealed-world-worst-methane-leaks-global-heating?CMP=Share_iOSApp_Other
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Ambassador Ken Fairfax (ret)
27 days ago
Simple information about what the SAVE Act would actually do to American voters. Tens of millions would lose their right to vote unless they spend lots of $$$ and jump through bureaucratic hoops before November.
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Mohave County Indivisible
28 days ago
We warn fellow members of the Muslim community that at some point the GOP would return to demonizing Muslims. The GOP simply rotates their hate depending on need. Their hatred towards Latinos is costing them votes so now it's Muslims. Soon they will be back to LGBTQ, Blacks, women and repeat.
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Stegle Lab
29 days ago
How do immune disease-relevant variants rewire gene regulation in CD4+ T cells? In a collaboration led by Daniel Schraivogel and Lars Steinmetz at
@embl.org
, we combined two large-scale CRISPRi screens (4.1M cells) to map the downstream cascades of thousands of SNPs.
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Alex Schier
29 days ago
Very happy to see this out. 👏
@yinanwan.bsky.social
Bogdan Bintu and team. Whole-embryo spatial transcriptomics at subcellular resolution from gastrulation to organogenesis | free link Science
www.science.org/eprint/5MHTM...
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Whole-embryo spatial transcriptomics at subcellular resolution from gastrulation to organogenesis
Gene expression patterns underlie development, but their systematic detection in whole embryos has remained elusive. We introduce a whole-embryo imaging platform using multiplexed error-robust fluores...
https://www.science.org/eprint/5MHTMR4RZ75TTPBZSW4J/full?activationRedirect=/doi/full/10.1126/science.adt3439
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Rita Strack
30 days ago
Pediatrics & Child Health has been publishing fictional case studies for 25 years and is now "correcting" them to acknowledge they are fictional. I have never seen anything like this.
retractionwatch.com/2026/03/03/c...
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A medical journal says the case reports it has published for 25 years are, in fact, fiction
A Canadian journal has issued corrections on 138 case reports it published over the last 25 years to add a disclaimer: The cases described are fictional. Paediatrics & Child Health, the journal…
https://retractionwatch.com/2026/03/03/canadian-pediatric-society-journal-correction-case-reports-fictional-paediatrics-child-health/?utm_medium=email&_hsenc=p2ANqtz-9cIaGBr7T-Y2j4LGmUVwP9zaCOvqlDWFTU8T0F_eJ4yzco0aG7b2xiPHJ9oitfIoAfyYb18qTabMidhwHIuNOD2T-O0Q&_hsmi=408133330&utm_content=408133330&utm_source=hs_email
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Open Targets
29 days ago
Out now on bioRxiv! 🧬🖥️ Dewi Moonen,
@anniquec.bsky.social
and a team led by Lars Steinmetz and Daniel Schraivogel at EMBL have mapped the downstream regulatory networks of thousands of immune disease-relevant variants in CD4+ T cells
www.biorxiv.org/content/10.6...
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https://www.biorxiv.org/content/10.64898/2026.03.09.710372v1
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Saez-Rodriguez Group
29 days ago
🧵 See 👇 our new preprint on shared and organ-specific gene expression programs of fibrotic diseases 🧬 📄 Paper:
doi.org/10.64898/202...
📊 Explore the data:
organfibrosis.saezlab.org
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Stephen Turner
30 days ago
We have a winner
alignmentalignment.ai
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Center for the Alignment of AI Alignment Centers
We align the aligners
https://alignmentalignment.ai
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Ryan Radecki MD MS
about 1 month ago
The brain drain continues – the U.S. has lost arguably its most important scientific awards ceremony:
arstechnica.com/science/2026...
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Ig Nobels ceremony moves to Europe over security concerns
Marc Abraham: “During the past year, it has become unsafe for our guests to visit the country."
https://arstechnica.com/science/2026/03/ig-nobels-ceremony-moves-to-europe-over-security-concerns/
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Canadian Liberal
about 1 month ago
When a US missile killed 160 children, president shits-a-lot claimed Iran stole the missile and fired at the school. When asked why he was the only one making this claim, he said "because I just don't know enough about it". Go ahead. See if you can make this make sense. (Source: RB Hubbell)
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The Onion
about 1 month ago
Trump’s War On Iran: Myth Vs. Fact
https://theonion.com/trumps-war-on-iran-myth-vs-fact/
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Zentrum für Politische Schönheit
about 1 month ago
In Deutschland denken Frauen heute darüber nach, ihre Babys abzutreiben, weil die Wohnung zu klein ist. Keine bezahlbare Wohnung, keine Kinder. Und die CDU will die Partei von Familie und Heimat sein? In den 60er Jahren schuf die CDU "das Wohnungswunder"! Für Adenauer war…
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ZMBH
about 1 month ago
We are are searching a scientific manager for the ZMBH. This position requires a life sciences PhD & excellent German skills, therefore the advertisement is formulated in German. Very good English skills are needed as well. You are welcome to share the ad:
www.academics.de/jobs/wissens...
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Wissenschaftliche*r Geschäftsführer*in (w/m/d) - Zentrum für Molekulare Biologie der Universität Heidelberg - Universität Heidelberg
Universität Heidelberg bietet Stelle als Wissenschaftliche*r Geschäftsführer*in (w/m/d) - Zentrum für Molekulare Biologie der Universität Heidelberg in Heidelberg - jetzt bewerben!
https://www.academics.de/jobs/wissenschaftliche-r-geschaeftsfuehrer-in-w-m-d-zentrum-fuer-molekulare-biologie-der-universitaet-heidelberg-universitaet-heidelberg-1106239
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EMBL
about 1 month ago
Is the linear map of cell signaling a myth? New research suggests the reality of cellular networks is more complex.
@savitski-lab.bsky.social
&
@saezlab.bsky.social
combined experimental and computational expertise to test how we map kinase–substrate interactions.
www.nature.com/articles/s41...
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Benchmarking EGF signaling pathway inference using phosphoproteomics and kinase-substrate interactions - Nature Communications
To what extent can large-scale approaches accurately reconstruct classic signaling pathways? Here, authors revisit the EGF pathway using phosphoproteomics and kinase-substrate interactions
https://www.nature.com/articles/s41467-026-69332-0
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George Takei
about 1 month ago
The religious right has infiltrated far into our military with disturbing consequences.
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Julia Rühle
about 1 month ago
The main project of my PhD 🧬🔬 is out: we developed single-cell lentiMPRA, a lentivirus-based method to measure enhancer activity and transcriptomes at single-cell resolution. We then applied sc-lentiMPRA to fully synthetic enhancers 🧩... 🔗
doi.org/10.64898/202...
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https://doi.org/10.64898/2026.02.27.708495
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Lars Velten
about 1 month ago
Now, synthetic enhancers with single cells - great work by
@juruehle.bsky.social
:
www.biorxiv.org/content/10.6...
add a skeleton here at some point
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Julia M. Rohrer
about 1 month ago
Hannah Ritchie has built a fun little tool where you can compare energy usage of various products and activities. This is super helpful imho, because it's so hard to develop intuitions even just about the scales involved here.
hannahritchie.substack.com/p/does-that-...
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Stephen Turner
about 1 month ago
Chance and Consensus in Peer Review (1981)
www.science.org/doi/10.1126/...
tltle: it's a lottery system)
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Margarida Cardoso Moreira
about 1 month ago
Our internal organs are evolutionary marvels. New technologies are transforming our understanding of the evolution of vertebrate organs. You can find more by reading here:
rdcu.be/e5EgU
#EvoBio
#EvoDevo
🐟🦎🐢🦇🐊🦜
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The molecular evolution of vertebrate organs
Nature Ecology & Evolution - This Review discusses recent advances in the molecular evolution of vertebrate organs, including rates of evolution of organs and cell types, molecular mechanisms...
https://rdcu.be/e5EgU
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The Onion
about 1 month ago
Democrats Wear White Flag Pins To SOTU To Indicate Surrender
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Bruce Little
about 1 month ago
THERE’S POWER IN BOYCOTTING!
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Scientific American
about 1 month ago
Thunderstorms can generate weak electrical discharges on the plants underneath, but until now, they had never been observed in nature
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See how thunderstorms create ghostly UV sparks on the tips of trees
Thunderstorms can generate weak electrical discharges on the plants underneath, but until now, they had never been observed in nature
https://www.scientificamerican.com/article/ghostly-uv-sparks-light-up-forests-as-thunderstorms-pass-overhead/
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Stephen Turner
about 2 months ago
Press the Red Button, Dave. A small study at LANL has real-world
#biosecurity
relevance: evaluating whether AI can transfer tacit laboratory skill to novices.
doi.org/10.59350/6e0...
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Press the Red Button, Dave
A small study at LANL has real-world biosecurity relevance: evaluating whether AI can transfer tacit laboratory skill to novices.
https://doi.org/10.59350/6e0f5-s2682
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Yarwanaw
about 2 months ago
THIS 👇is pure EVIL.
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Illness Is rampant among children trapped in ICE’s massive jail in Texas
The number of people held at the notorious Dilley immigration jail has nearly tripled since October.
https://www.sacurrent.com/news/san-antonio-news/illness-is-rampant-among-children-trapped-in-ices-massive-jail-in-texas/
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molneurolab.bsky.social
about 2 months ago
📖 Our new pseudotime alignment tool ptalign identifies Wnt antagonist SFRP1 as central for glioblastoma cell activation, opening new avenues for patient stratification and therapeutic avenues. 🔗
lnkd.in/ees8bhNY
by @Leo Carl Foerster, Oguzhan Kaya et al.
#glioblastoma
#pseudotime
#neurobiology
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Cross-species comparison reveals therapeutic vulnerabilities halting glioblastoma progression - Nature Communications
Understanding the growth dynamics of GBMs can help expand therapeutic options. Here, authors use a cross-species computational approach to compare GBM cells to healthy neural stem cells, identifying p...
https://www.nature.com/articles/s41467-025-62528-w
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Stephen Turner
about 2 months ago
ggannotate: interactively add annotations to your {ggplot2} plots by pointing and clicking
github.com/MattCowgill/...
#Rstats
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Julia M. Rohrer
2 months ago
Absolutely savage, I love it.
add a skeleton here at some point
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Itai Yanai
3 months ago
With all the excitement about AI giving us answers, we often forget that the real trick is to figure out what is the question.
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Karsten Rippe
4 months ago
8/ 🤘 For those about to rock (around the Christmas tree), we salute you 🎸🎄: Isabelle Seufert & our team from
@dkfz.bsky.social
& BioQuant &
@akispapantonis.bsky.social
, Philipp Mallm,
@s-anders.bsky.social
& Petros Kolovos labs with support from
@spp2202.bsky.social
&
@mspacealliance.bsky.social
.
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Karsten Rippe
4 months ago
1/ 🎄 We got our Christmas present today: "Two distinct chromatin modules regulate proinflammatory gene expression" is now published
@natcellbio.nature.com
doi.org/10.1038/s415...
. Our study introduces a scATAC-seq-based framework for genome-wide analysis of gene regulation features.
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Elizabeth Jacobs, PhD
4 months ago
It is utterly catastrophic that RFK Jr. plans to end CDC recommendations for most childhood vaccines. It’s a betrayal of science, ethics, compassion, and the people of the United States. And it was also a specific goal of Project 2025 (page 254).
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Luke McGee
4 months ago
This is the most alarming story I’ve read today. Giving up the fight before it’s started
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Lars Velten
4 months ago
ISCO (Innovations in Single-Cell OMICS) will be back in beautiful Barcelona! 🗓️ 28th/29th of May 2026 📍Barcelona Biomedical Research Park
@prbb.org
(beachfront!) Keynotes:
@bartdeplancke.bsky.social
and
@bocklab.bsky.social
Submit your abstract and present your research!
www.isco-conference.eu
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Dr. ir. Brian R. Pauw 🍉
4 months ago
One step in the right direction from
@cnrs.fr
. Here’s hoping others will follow and we can get some more space for actual science. 🧪
www.cnrs.fr/en/update/cn...
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The CNRS is breaking free from the Web of Science
From January 1st 2026, the CNRS will cut access to one of the largest commercial bibliometric databases, Clarivate Analytics'
https://www.cnrs.fr/en/update/cnrs-breaking-free-web-science
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Simon Anders
Britta Velten
4 months ago
Happy to see this out now in Cell Genomics: A genome-scale single-cell CRISPRi map of trans gene regulation across human pluripotent stem cell lines:
www.cell.com/cell-genomic...
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A genome-scale single-cell CRISPRi map of trans gene regulation across human pluripotent stem cell lines
Feng et al. present the first genome-scale CRISPR interference perturbation map with scRNA-seq readout across many genetic backgrounds in human pluripotent cells, pioneering population-scale CRISPR pe...
https://www.cell.com/cell-genomics/fulltext/S2666-979X%2825%2900332-5
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Simon Anders
Ensembl
4 months ago
Our Ensembl 2026 paper is out! Learn about 1,900+ new genomes, expanded pangenome support, new regulation interfaces, and what’s coming in our 2026 releases.
doi.org/10.1093/nar/gkaf1239
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Ensembl 2026
Abstract. The Ensembl project (https://www.ensembl.org) is a public and open resource providing access to genomes, annotations, high-quality tools, and met
https://academic.oup.com/nar/advance-article/doi/10.1093/nar/gkaf1239/8343504
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Evangelia Petsalaki
4 months ago
#Postdoc
alert! We are looking for motivated individual with experience in computational systems biology to join our NetworkCommons initiative to benchmark and democratise network contextualisation methods across multiple applications. Deadline Dec 17th link here:
tinyurl.com/yrrzxa94
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Postdoctoral fellow - Petsalaki Group - NetworkCommons
Your group The Petsalaki, Saez-Rodriguez (EMBL-EBI) and Korcsmáros (Imperial College) groups develop cutting-edge computational and AI approaches to unravel cellular signalling and gene regulation fro...
https://tinyurl.com/yrrzxa94
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Randall Munroe
4 months ago
Fifteen Years
xkcd.com/3172/
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Ian M. Mackay, PhD (he/him) 🦠🤧🧬📑🦟🧀
5 months ago
Frikkin amazing stuff.
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