Joost Snijder
@joostsnijder.bsky.social
📤 2734
📥 457
📝 279
a sort of scientist. viruses and antibodies. structure and biophysics. mass spec and cryoEM
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Joost Snijder
Friedrich Förster
about 12 hours ago
The first cut is the deepest: Cleavable signal peptides direct thousands of different nascent proteins to the endoplasmic reticulum. Oddly, SPs are all different and nevertheless cleaved with exquisite specificity. Our new cryo-EM structures + MD solve this paradox:
www.nature.com/articles/s41...
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Structural basis of signal peptide recognition by the signal peptidase complex - Nature Communications
Signal peptides are highly variable, yet the signal peptidase complex processes them with remarkable specificity. Here, authors combine cryo-EM, molecular dynamics simulations and modeling to reveal a...
https://www.nature.com/articles/s41467-026-73423-3
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Joost Snijder
Tanmay Bharat
about 22 hours ago
Sub-cellular chemical mapping using correlated cryogenic electron and mass spectrometry imaging online
@natmethods.nature.com
, led by Hannah Ochner, collaboration with
@catfranco.bsky.social
and
@kiranrpatil.bsky.social
labs
doi.org/10.1038/s415...
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Joost Snijder
BK. Titanji
3 days ago
1/WHO's IHR Emergency Committee has issued formal recommendations for the Bundibugyo virus PHEIC. Yesterday's press briefing gave the most complete picture yet of what's happening on the ground. Full update thread 🧵
#EbolaOutbreak
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Joost Snijder
Victoria Deneke
4 days ago
How do sperm and egg fuse? Surprisingly, we still don’t fully know… Our field has uncovered many pieces of the fertilization puzzle, but not how they fit together. We identify ✨ SPARK ✨ - a conserved sperm complex that couples sperm-egg binding to fusion.
tinyurl.com/34cm4xat
Read on! 🧵👇
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Wrapped up a great symposium today, thanks to all our guests and speakers!
add a skeleton here at some point
6 days ago
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Joost Snijder
Tim Hofman
7 days ago
In NL kan je je kind op grond van geloofs- of levensovertuiging uit het onderwijssysteem trekken. Maar die vrijstelling 'is bedoeld voor ouders met extreem gedachtegoed. De overheid faciliteert dit.' aldus een kinderrechtenonderzoeker. Ondertussen maken influencers er een verdienmodel van.
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Helen Branswell 🇨🇦
7 days ago
The outbreak of
#Ebola
#Bundibugyo
is now the 3rd largest on record. The
#WHO
country rep in DRC, Anne Ancia, told the World Health Assembly today that the suspected case count is now over 500, with 130 suspected deaths. This will be hugely difficult to contain.
www.unognewsroom.org/story/en/312...
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Daniel Hurdiss
8 days ago
Excited to share our new preprint! Using deep mutational scanning and multivalent engineering, we developed our SARS-CoV-2 spike-targeting macrocyclic peptide into a potent inhibitor that blocks infection in HAE cultures and protects hamsters after intranasal dosing.
chemrxiv.org/doi/full/10....
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Development of a Multivalent Macrocyclic Peptide that Shows In Vivo Protection Against SARS-CoV-2 Infection Following Intranasal Administration | ChemRxiv
The risk of zoonotic spillover of coronaviruses poses a constant threat to humanity, as recently exemplified by SARS‑CoV-2. During the pandemic, the rapid emergence of immune escape mutations led to a loss of efficacy of both therapeutic and humoral anti‑...
https://chemrxiv.org/doi/full/10.26434/chemrxiv.15003355/v1
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Joost Snijder
Björn Meyer
8 days ago
virological.org/t/initial-ge...
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Initial genomes from May 2026 Bundibugyo Virus Disease Outbreak in the Democratic Republic of the Congo and Uganda
Initial genomes from May 2026 Bundibugyo Virus Disease Outbreak in the Democratic Republic of the Congo and Uganda, reveal a new spillover event Context On 15 May 2026, the Ministry of Public Health, ...
https://virological.org/t/initial-genomes-from-may-2026-bundibugyo-virus-disease-outbreak-in-the-democratic-republic-of-the-congo-and-uganda/1032
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Joost Snijder
WHO
9 days ago
Under the IHR (2005),
@drtedros.who.int
, the Director General of WHO, having consulted the States Parties where the event is occurring, has determined that the Ebola disease caused by Bundibugyo virus in DRC & Uganda constitutes a public health emergency of international concern
bit.ly/3P4ZDac
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Kai Kupferschmidt
10 days ago
I’ve been trying to understand what we know and don’t know so far about the concerning Ebola outbreak in DRC. Still lots of uncertainty at the moment but here‘s what I have been able to find out so far. Story is here (thread coming later):
www.science.org/content/arti...
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Major outbreak of rare Ebola virus species in northern Congo alarms scientists
No vaccines exist for Ebola Bundibugyo, which has caused 80 suspected deaths in the Democratic Republic of the Congo and one in Uganda
https://www.science.org/content/article/major-outbreak-rare-ebola-virus-species-northern-congo-alarms-scientists
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Finally got my copy of
@mollycrabapple.bsky.social
’s new book, can’t wait to dig in.
10 days ago
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Joost Snijder
Follow the Money
10 days ago
De Belastingdienst houdt al jarenlang belangrijke documenten achter in rechtszaken met burgers en bedrijven. In meerdere zaken werden rechters verkeerd geïnformeerd en kwamen cruciale stukken pas na lange juridische procedures boven water, soms zelfs nadat ondernemers al waren veroordeeld.
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Belastingdienst misleidde meermaals de rechter en hield onterecht stukken achter
Wie een conflict heeft met de Belastingdienst, heeft wettelijk recht op zijn complete dossier. Dit fundamentele beginsel schendt de dienst al jaren, blijkt uit onderzoek van Follow the Money. De recht...
https://www.ftm.nl/artikelen/belasting-dienst-misleidde-meermaals-de-rechter-en-hield-onterecht-stukken-achter?utm_source=bluesky&utm_medium=social&utm_campaign=BelastingdienstRechter
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Joost Snijder
La Jolla Institute for Immunology (LJI)
11 days ago
LJI Professor, President & CEO Erica Ollmann Saphire, Ph.D., talks
#measles
AND big steps her lab has taken in developing a measles treatment:
youtu.be/oy8xnsSb4U0?...
#ImmuneSystem
#Immunology
#Virology
#Viruses
#Health
#Medicine
#SanDiego
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The Search for the World’s First Measles Treatment
YouTube video by La Jolla Institute for Immunology
https://youtu.be/oy8xnsSb4U0?si=LToZDPqY5ntueWWo
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Joost Snijder
Kay Choi Lab
11 days ago
The abstract deadline for the FASEB Virus Structure and Assembly Conference is approaching - May 25! Join us for an exciting meeting on structural virology, virus assembly, RNA biology, and antiviral therapeutics. We look forward to seeing you there!
#FASEB
#Virology
#StructuralBiology
#CryoEM
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Joost Snijder
Helen Branswell 🇨🇦
11 days ago
#Ebola
: New outbreak in NE DRC, in Ituri province, where the large 2018-2020 outbreak took place. Security issues there make responses challenging. DRC has announced this one is caused by the Bundibugyo species of Ebola. Only 2 previous Bundibugyo outbreaks (2007, 2012). No licensed vaccine for it.
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Joost Snijder
Amy Maxmen, PhD
11 days ago
New Ebola outbreak in Ituri, DRC, with 65 reported deaths, so far. My heart goes out to people there, already suffering from deadly attacks on civilians.
www.aljazeera.com/news/2026/5/...
Ebola could spread because of people displaced from conflict, says
#AfricaCDC
.
africacdc.org/news-item/af...
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Africa CDC Calls Urgent Regional Coordination Meeting Following Ebola Virus Disease Outbreak in Ituri Province, DRC – Africa CDC
Addis Ababa, Ethiopia / Kinshasa, DRC, 15 May 2026 — The Africa Centres for Disease Control and Prevention (Africa CDC) is closely monitoring the confirmed Ebola Virus Disease outbreak in Ituri province, Democratic Republic of the Congo, and is working with national authorities and partners to support a rapid, coordinated response. Following consultations with the […]
https://africacdc.org/news-item/africa-cdc-calls-for-urgent-regional-coordination-meeting-following-ebola-virus-disease-outbreak-in-ituri-province-drc/
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Joost Snijder
Oli Clarke
11 days ago
Open q to the
#cryoem
crowd - what’s your fav NN/ML picker for hard SPA targets? We use topaz with good results, but there have been a bazillion new pickers over the last years… It is often hard to tell from the paper on each picker, as the training data matters a lot for topaz at least..
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Joost Snijder
cryoEM papers
11 days ago
Benchmarking Boltz-2 for Screening of Therapeutic Antibody-Antigen Interactions
www.biorxiv.org/content/10.64898/2026.05.13.724924v1
#cryoem
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Joost Snijder
Thelonevirologist
12 days ago
Open and closed forms of assembled henipavirus nucleoprotein suggest structural basis of genome access
www.science.org/doi/10.1126/...
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Open and closed forms of assembled henipavirus nucleoprotein suggest structural basis of genome access
Henipavirus nucleoprotein assemblies exist in different conformations, indicating temporary release of genome for RNA synthesis.
https://www.science.org/doi/10.1126/sciadv.aed8300
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Joost Snijder
Nature Reviews Microbiology
12 days ago
New online! Concepts of RNA virus evolution for the design of better antiviral countermeasures
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Concepts of RNA virus evolution for the design of better antiviral countermeasures
Nature Reviews Microbiology, Published online: 14 May 2026; doi:10.1038/s41579-026-01316-9In this Review, Tran and Vignuzzi examine how molecular processes and evolutionary pressures shape RNA virus diversity and adaptation. They outline how genome structure, mutational pathways and viral interactions influence evolutionary outcomes, offering insights relevant to the design of better vaccines and antiviral strategies.
http://dlvr.it/TSXTlt
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HELP! These are some very funky viral O-linked glycans. This is the low mass range of an HCD scan on the glycopeptide. Challenge: What the hell am I looking at? Asking for a friend 😉.
#glycotime
13 days ago
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Joost Snijder
Happy to announce our mini symposium: INVECTA – from structural virology to oncolytic vectors The symposium will take place on the occasion of our ongoing Marie Curie Staff Exchange program INVECTA. Hope to see you there!
20 days ago
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Joost Snijder
Marvin Tanenbaum
13 days ago
For 40 years the 8-nt ‘Kozak Sequence’ was thought to mark sites of translation initiation. In a new study, we revise this model by identifying an ~80-nt sequence—the extended Translation Initiation Sequence (eTIS)— that guides ribosomes to correct start sites. 🧵
www.biorxiv.org/content/10.6...
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https://www.biorxiv.org/content/10.64898/2026.05.12.723742v1
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Joost Snijder
Mart Krupovic
15 days ago
With Eugene Koonin, we wrote a rather comprehensive review on the origin, evolution and organization of the
#virosphere
. We describe all 10 viral realms and the logic behind them, and so much more. Check it out!
comptes-rendus.academie-sciences.fr/biologies/ar...
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Joost Snijder
David Bhella
15 days ago
Amazing work from Charlotte Lewis - our latest preprint describes structure guided development of an antiviral peptide, targeting VP2 portal assembly - a strategy that may have broad application to treat or prevent calicivirus disease.
www.biorxiv.org/content/10.6...
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https://www.biorxiv.org/content/10.64898/2026.05.10.723473v1
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Joost Snijder
Bijvoet Centre
15 days ago
We are excited to be at our annual Bijvoet Symposium today, for a day filled with exciting structural biology presented by our PhD students and postdocs!
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Bijvoet Symposium today, here’s Gunnar Schroeder kicking things off.
@bijvoet-centre.bsky.social
15 days ago
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Joost Snijder
cryoEM papers
17 days ago
Human neutralizing antibodies targeting the measles virus hemagglutinin and fusion surface proteins
pubmed.ncbi.nlm.nih.gov/42102820/
#cryoem
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Joost Snijder
Daniel Hurdiss
19 days ago
Honoured to receive the 2026 ACS Infectious Diseases Early Career Award alongside Laura Dassama and Patrick Dolan! Grateful for this recognition, and especially grateful to my wonderful colleagues, collaborators, and lab members who made the work possible.
axial.acs.org/biological-c...
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Biological and Medicinal Chemistry 2026 Lectureship and Award Winners | ACS Publications Chemistry Blog
Learn about the 2026 winners of ACS Publications' Biological and Medicinal Chemistry lectureships and awards.
https://axial.acs.org/biological-chemistry-and-chemical-biology/biological-and-medicinal-chemistry-2026-lectureship-and-award-winners
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reposted by
Joost Snijder
Dawid Zyla
19 days ago
Read about our story in the Washington Post!
add a skeleton here at some point
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Joost Snijder
Dawid Zyla
19 days ago
Link to our story:
www.sciencedirect.com/science/arti...
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Human neutralizing antibodies targeting the measles virus hemagglutinin and fusion surface proteins
Measles virus (MeV), a highly transmissible paramyxovirus, can cause severe complications and death, particularly in infants and young children. How a…
https://www.sciencedirect.com/science/article/pii/S1931312826001666
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Joost Snijder
Dawid Zyla
19 days ago
Measles is coming back. Until now, we didn't know how human antibodies actually recognize and neutralize the virus. No structure of either measles surface protein bound to a human antibody had ever been reported. We set out to change that.
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Joost Snijder
Albert Heck
19 days ago
The next episode in our quest at
@utrechtuniversity.bsky.social
to answer "what do we know about your antibodies?" Structural promiscuity in the human circulatory IgA1 clonal repertoire | PNAS
www.pnas.org/doi/10.1073/...
. Funded by
@erc.europa.eu
. Congrats to Amber Rolland
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Structural promiscuity in the human circulatory IgA1 clonal repertoire | PNAS
Immunoglobulin A (IgA) is the most abundant antibody in humans, with high concentrations in both mucosae/secretions and circulation. While mucosal ...
https://www.pnas.org/doi/10.1073/pnas.2533440123
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Joost Snijder
David Bhella
19 days ago
Really happy to see this paper out now in PLOS Pathogens - a really nice collaboration with
@alanlparker.bsky.social
- led by Kasim Waraich and Rosie Mundy.
journals.plos.org/plospathogen...
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Identification of a novel fiber shaft structural motif and overexpression of key transcripts elucidated in human adenovirus D 10
Author summary Adenoviruses cause infections with pathologies ranging from cold like respiratory symptoms to gastroenteritis and conjunctivitis. In addition to research on adenovirus pathology, substa...
https://journals.plos.org/plospathogens/article/comments?id=10.1371/journal.ppat.1014182
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Joost Snijder
Follow the Money
19 days ago
De uitkomst van een algoritme kan genoeg zijn om jou als verdachte burger te behandelen, ook als je niks verkeerd hebt gedaan. Overheidsinstanties gebruiken risicoprofielen om criminaliteit op te sporen. Nu roept de Staatscommissie tegen Discriminatie en Racisme op om met die praktijken te stoppen.
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Staatscommissie: stop met profileren voor opsporing van fraude en criminaliteit
Follow the Money - Platform voor onderzoeksjournalistiek
https://www.ftm.nl/nieuwsbrieven/staats-zucommissie-stop-met-profileren-voor-opsporing-van-fraude-en-criminaliteit?utm_source=bluesky&utm_medium=social&utm_campaign=NieuwsbriefStaatscommissie
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Happy to announce our mini symposium: INVECTA – from structural virology to oncolytic vectors The symposium will take place on the occasion of our ongoing Marie Curie Staff Exchange program INVECTA. Hope to see you there!
20 days ago
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Joost Snijder
ASMS
21 days ago
Congratulations to Albert J.R. Heck, recipient of the 2026
#ASMS
John B. Fenn Award for Distinguished Contribution! A leader in the field, his work continues to shape the future of
#massspectrometry
. We’re excited to celebrate his achievements at
#ASMS2026
in San Diego.
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Meet my new neighbour. Moved into a sycamore in the backyard last winter, now raising a family of three in an abandonded magpie’s nest.
21 days ago
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Joost Snijder
Max Renner
22 days ago
📢 We are now recruiting a PhD student in Structural and Molecular Virology in Sweden 🇸🇪 Work on RNA viruses using cryo-EM and in situ cryo-ET, with access to world-class microscopy infrastructure Perfect for candidates with backgrounds in biochem, structural bio, and virology More info ⬇️
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Joost Snijder
Dimitry Tegunov
23 days ago
We're super excited to share MissAlignment: a new ML-based approach to reference-free tilt series alignment, spearheaded by
@martenchaillet.bsky.social
. We think it's going to make your cryo-ET life a lot better. Preprint:
www.biorxiv.org/content/10.6...
Code:
github.com/warpem/miss-...
🧶 Thread:
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Kim van Keken
27 days ago
'In een arena waarin de meningsvorming van bovenaf wordt gestuurd gaat het politieke debat niet over het oprukken van de oligarchie en de technocratie, maar nog steeds over immigratie.'
www.nrc.nl/nieuws/2026/...
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Column | Waarom het nog steeds over de oude onderwerpen gaat
Je moet luider praten, zeggen alle mensen die ik tegenkom. Sneller, snijdender, groter, glimmender. Wie vrede wil, moet harder roepen. Ook krijg ik, omdat ik op een lijst sta, post van positieve mense...
https://www.nrc.nl/nieuws/2026/04/28/waarom-het-nog-steeds-over-de-oude-onderwerpen-gaat-a4926441?gift_token=4926441%7E1778060845%7EQ669uem5Q2qj72j1IqlVCQ%7EqYAMLZLonXN9rTqG-McAWz-wlTsDQXBMzNKDGRg8oX4
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Joost Snijder
cryoEM papers
25 days ago
Broad neutralization of influenza B hemagglutinin antibodies via receptor mimicry and glycan engagement
pubmed.ncbi.nlm.nih.gov/42060718/
#cryoem
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Joost Snijder
Follow the Money
25 days ago
De Limburgse ondernemer Martijn W. lijkt met voorkennis te hebben gehandeld bij defensie-inkopen. Zijn bedrijven werden eerder onderzocht door FTM vanwege schulden, meerdere faillissementen en strafrechtelijk onderzoek. Nu start Defensie een intern onderzoek naar een mogelijk ambtelijk lek.
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Hoe verkreeg deze omstreden wapenhandelaar zijn info over lucratieve deals bij Defensie?
De Limburgse wapenhandelaar Martijn W., naar wie een strafrechtelijk onderzoek loopt, handelde met voorkennis, blijkt uit onderzoek van Follow the Money. Naar aanleiding daarvan start Defensie een int...
https://www.ftm.nl/artikelen/hoe-verkreeg-deze-omstreden-wapenhandelaar-info-over-lucratieve-deals-bij-defensie?utm_source=bluesky&utm_medium=social&utm_campaign=MartijnWOnderzoek
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Joost Snijder
cryoEM papers
25 days ago
Vaccination generates broadly cross-neutralizing antibodies to the HIV Env apex
pubmed.ncbi.nlm.nih.gov/42056526/
#cryoem
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Joost Snijder
Daniel Hurdiss
26 days ago
The past, present and future of de novo protein design
www.nature.com/articles/s41...
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The past, present and future of de novo protein design - Nature
A Review of de novo protein design highlights key methodological advances and achievements, current challenges and future applications.
https://www.nature.com/articles/s41586-026-10328-7
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Joost Snijder
Thelonevirologist
26 days ago
Co-release of tick-borne encephalitis virus RNA and structural proteins via virus-like particles and extracellular vesicles
www.microbiologyresearch.org/content/jour...
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Co-release of tick-borne encephalitis virus RNA and structural proteins via virus-like particles and extracellular vesicles
Tick-borne encephalitis virus (TBEV) is a medically important flavivirus that causes severe neurological diseases in humans. The assembly of flaviviruses is initiated by the interaction between capsid...
https://www.microbiologyresearch.org/content/journal/jgv/10.1099/jgv.0.002258
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Joost Snijder
Lars-Anders Carlson
26 days ago
Open
#postdoc
fellowship in my group. Virus replication and cryo-ET. Projects can be tailored to ambitious candidates with diverse backgrounds, so don't hold back from applying! DM for more info. Deadline 22May. Apply here:
umustipendie.varbi.com/en/what:job/...
#virus
#virology
#teamtomo
#cryoEM
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Joost Snijder
Francesca Mattiroli
26 days ago
We are looking for a PhD student to study chromatin changes related to heart regeneration, in collaboration with
@bakkerslab.bsky.social
. Please share and apply!
www.hubrecht.eu/nl/vacature/...
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PhD student - 38 hours p/w - Hubrecht Institute
We are looking for PhD student in the group of Dr. Francesca Mattiroli at the Hubrecht Institute. The successful candidate will work in a collaborative project between the Mattiroli lab and the lab of...
https://www.hubrecht.eu/nl/vacature/phd-student-38-hours-p-w/
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Joost Snijder
Follow the Money
26 days ago
Moderne oorlogsvoering gebeurt op afstand, aangestuurd door algoritmen. De drones en satellieten die in Oekraïne en Gaza zijn getest, bepalen nu de conflicten in Iran en Libanon. Met haar onderzoek wil Lauren Gould laten zien hoe groot de impact hiervan is, ook lang nadat de bom gevallen is.
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‘Oorlogsvoering op afstand laat ons vergeten wat oorlog werkelijk is: dood en vernietiging’
De oorlog van de VS en Israël tegen Iran laat zien hoe hedendaagse conflicten met behulp van kunstmatige intelligentie, drones en satellieten op afstand worden gevoerd. Onderzoeker Lauren Gould heeft ...
https://www.ftm.nl/artikelen/oorlogsvoering-op-afstand-laat-ons-vergeten-wat-oorlog-werkelijk-is-dood-en-vernietiging?utm_source=bluesky&utm_medium=social&utm_campaign=InterviewGouldNL
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