Carballido-López's lab
@carballido-lab.bsky.social
📤 61
📥 105
📝 4
reposted by
Carballido-López's lab
Rhys Grinter
5 days ago
The outer membrane of Gram-negative bacteria blocks many antibiotics. Our latest work reveals that L-type pyocins bypass this barrier by inactivating the BAM complex, killing Pseudomonas aeruginosa without entering the cell, providing a new blueprint for beating antibiotic resistance.
loading . . .
A Protein Antibiotic Inhibits the BAM Complex to Kill Without Cell Entry
Many antibiotics are ineffective against Gram-negative pathogens such as Pseudomonas aeruginosa because they cannot penetrate the bacterial outer membrane. Here, we show that protein antibiotics calle...
https://www.biorxiv.org/content/10.1101/2025.09.18.677229v1
2
65
37
reposted by
Carballido-López's lab
Paula Navarro
6 months ago
🚨👉 Please check our recent work on bacterial cell division. In situ Cryo-ET reveals the cellular function of the penicillin binding protein 1b supported by AFM, live-cell imaging, in silico AlphaFold proteome screen and TIRFM. Hope you enjoy the read!
#teamtomo
#cryo-ET
❄️🔬🐎 big thanks to the team!
add a skeleton here at some point
0
56
27
reposted by
Carballido-López's lab
bioRxiv Microbiology
11 days ago
Peptidoglycan turnover promotes active transport of protein through the bacterial cell wall
https://www.biorxiv.org/content/10.1101/2025.09.12.675941v1
0
8
6
reposted by
Carballido-López's lab
PLOS Biology
21 days ago
Uropathogenic
#Ecoli
#UPEC
proliferate as round coccoid cells during intracellular infection;
@alaskapokhrel.bsky.social
@bill-lab.bsky.social
&co show that accelerated division via FtsZ constriction drives this, the coccobacillus form persisting for generations
@plosbiology.org
🧪
plos.io/4gdx97i
1
6
10
reposted by
Carballido-López's lab
bioRxiv Microbiology
26 days ago
Architecture of a peptidoglycan peptidase complex involved in morphological transition in Helicobacter pylori.
https://www.biorxiv.org/content/10.1101/2025.08.29.672660v1
0
1
2
reposted by
Carballido-López's lab
Zeynep Baharoglu
27 days ago
Robust antibiotic sensitization of pathogenic Pseudomonas aeruginosa via negative hysteresis in the cell envelope. 🦠with Cpx, beta-lactams and aminoglycosides
www.biorxiv.org/content/10.1...
loading . . .
Robust antibiotic sensitization of pathogenic Pseudomonas aeruginosa via negative hysteresis in the cell envelope
Antibiotic combination in time and space is a key strategy to combat antimicrobial resistance. The success of such treatment designs requires their robust efficacy across treatment conditions and a pa...
https://www.biorxiv.org/content/10.1101/2025.08.22.671355v1
0
0
1
reposted by
Carballido-López's lab
Lucien Hinderling
about 1 month ago
🔬🧠 Our paper on smart microscopy & the issue of interoperability!
www.biorxiv.org/content/10.1...
LONG THREAD WARNING: Smart microscopy uses real-time image analysis to automatically guide the acquisition or perturbation of the sample (closed feedback-control loop). Many applications exist:
2
36
24
reposted by
Carballido-López's lab
bioRxiv Microbiology
about 1 month ago
Monitoring single cell bioenergetic status and cell lysis in dense and differentiating Bacillus subtilis cultures
https://www.biorxiv.org/content/10.1101/2025.08.21.671461v1
0
2
2
reposted by
Carballido-López's lab
Ákos T Kovács
about 1 month ago
See how phi3T phage shifts Bacillus subtilis cell shape in the absence of SPbeta prophage and alters its fitness - our new publication in
@commsbio.nature.com
from group of
@annadragos.bsky.social
together with
@bramkamplab.bsky.social
www.nature.com/articles/s42...
add a skeleton here at some point
1
25
12
reposted by
Carballido-López's lab
Ákos T Kovács
about 1 month ago
Coordination of virulence factors and lifestyle transition in Pseudomonas aeruginosa through single-cell analysis
@commsbio.nature.com
from
@diepold-lab.bsky.social
at
@mpimicrobiomarburg.bsky.social
with Victor Sourjik, Daniel Unterweger
www.nature.com/articles/s42...
loading . . .
Coordination of virulence factors and lifestyle transition in Pseudomonas aeruginosa through single-cell analysis - Communications Biology
Pseudomonas aeruginosa coordinates several virulence factors – the type 3 and H1-6 secretion systems and the flagellum – on a single cell level using the second messenger cyclic di-GMP, promoting subp...
https://www.nature.com/articles/s42003-025-08693-6
0
7
3
reposted by
Carballido-López's lab
Ákos T Kovács
about 1 month ago
RagB stimulates the activity of the peptidoglycan polymerase RodA in Bacillus subtilis [RagB = YrrS]
@emboreports.org
by Frédérique Pompeo et al
www.embopress.org/doi/full/10....
loading . . .
RagB stimulates the activity of the peptidoglycan polymerase RodA in Bacillus subtilis | EMBO reports
imageimageRagB regulates the SEDS protein RodA in Bacillus subtilis, by interacting with RodA and by stimulating its activity. This regulation is essential for cell wall synthesis, especially when Cla...
https://www.embopress.org/doi/full/10.1038/s44319-025-00547-w
0
10
7
reposted by
Carballido-López's lab
Adrià Sogues
about 1 month ago
Many spores from the Firmicutes group are decorated with hair-like structures. Since the 60s, they remained a mystery.
@remaut-lab.bsky.social
named these fibres ENdospore Appendages (ENAs). Using Cryo-ID, we report the identity, structure and function of F-ENA.
www.nature.com/articles/s41...
loading . . .
Cryo-EM identifies F-ENA of Bacillus thuringiensis as a widespread family of endospore appendages across Firmicutes - Nature Communications
B. thuringiensis spores contain uncharacterized protein filaments that extend from the surface of the exosporium. Here, the authors show that these filaments feature conserved β-barrel neck domains an...
https://www.nature.com/articles/s41467-025-62896-3
0
21
15
reposted by
Carballido-López's lab
Jörg Stülke
about 1 month ago
New cool work from French friends and colleagues: identification of Rho termination sites in B. subtilis!
academic.oup.com/nar/article/...
#SubtiWiki
@narjournal.bsky.social
@inrae-france.bsky.social
loading . . .
Comprehensive mapping of transcription terminator Rho utilization (Rut) sites across the Bacillus subtilis genome
Abstract. Recent evidence indicates that the bacterial Rho helicase regulates Bacillus subtilis gene expression in a growth-dependent manner. This regulati
https://academic.oup.com/nar/article/53/15/gkaf765/8234004
0
14
11
reposted by
Carballido-López's lab
John Helmann
about 1 month ago
The B. subtilis histidine-containing phosphocarrier protein (HPr) supports PTS-sugar import, interacts with GAPDH, and helps mediate carbon catabolite repression (CCR). Here, a mutant HPr protein is shown to alleviate metabolic intoxication in a cpgA mutant.
journals.asm.org/doi/10.1128/...
3
14
7
reposted by
Carballido-López's lab
Hana Polasek-Sedlackova
2 months ago
📢 For all HaloTag lovers💙💚💛❤️💜🩶 we are excited to share that our work, in which we developed a new biotin-HaloTag ligand, is now published in
@jcb.org
! Full link here:
rupress.org/jcb/article-...
loading . . .
1
64
24
reposted by
Carballido-López's lab
Amelia Randich
about 2 months ago
#Streptomyces
venezuelae uses an MreB-dependent lateral elongation growth mode during exploratory growth - publication drop mentioned during
#phages2025
🦠
www.nature.com/articles/s41...
loading . . .
Streptomyces uses both polar and dispersed cell wall synthesis during exploratory growth - Nature Microbiology
Streptomyces venezuelae requires MreB1-dependent dispersed peptidoglycan cell wall synthesis and DivIVA-mediated polar cell wall synthesis during its rapid exploratory growth phase.
https://www.nature.com/articles/s41564-025-02080-x
0
11
10
New paper from the lab! Check out for super-resolution microscopy of spore formation.
add a skeleton here at some point
about 2 months ago
0
2
2
reposted by
Carballido-López's lab
Adrià Sogues
about 2 months ago
Happy to see the final version out! Cryo-EM structure of the PS2 S-layer in Corynebacterium 🔬! We show it provides mechanical support to the cell wall and assembles at the poles in coordination with PG. It can also be used for covalent surface display.
www.pnas.org/doi/10.1073/...
#microsky
loading . . .
Cryo-EM structure and polar assembly of the PS2 S-layer of Corynebacterium glutamicum | PNAS
The polar-growing Corynebacteriales have a complex cell envelope architecture characterized by the presence of a specialized outer membrane compose...
https://www.pnas.org/doi/10.1073/pnas.2426928122
1
13
2
reposted by
Carballido-López's lab
Michael Deghelt
about 2 months ago
#microsky
We challenge the long-standing view that peptidoglycan alone protects cells from bursting. Our study shows that the periplasm — enclosed by OM–PG connections — acts as a pressure buffer essential for osmoprotection in Gram-negative bacteria. 📄
www.nature.com/articles/s41...
loading . . .
Peptidoglycan–outer membrane attachment generates periplasmic pressure to prevent lysis in Gram-negative bacteria - Nature Microbiology
Outer membrane attachment to peptidoglycan enables periplasmic pressure to build up and counter cytoplasmic turgor pressure, preventing lysis during osmotic challenges in Escherichia coli.
https://www.nature.com/articles/s41564-025-02058-9
2
63
44
reposted by
Carballido-López's lab
John Helmann
about 2 months ago
Metal ions are universally required for life, and many of the foundational principles of metal homeostasis have emerged from studies of microbial systems. In this review, I provide a introductory overview targeted to those new to the field.
#MicroSky
#Metals
rdcu.be/eycU2
loading . . .
Microbial metal physiology: ions to ecosystems
Nature Reviews Microbiology - Metal ions are required for all cells, and their homeostasis relies on ancient mechanisms that facilitate their import, distribution and storage. In this Review,...
https://rdcu.be/eycU2
4
98
42
reposted by
Carballido-López's lab
bioRxiv Microbiology
2 months ago
A versatile dual-color bacterial reporter system highlights two distinct Pseudomonas aeruginosa Type 3 secretion system intracellular populations.
https://www.biorxiv.org/content/10.1101/2025.07.23.666013v1
0
1
1
reposted by
Carballido-López's lab
Ákos T Kovács
2 months ago
Mechanism of lateral cell-wall expansion at a constant diameter in Bacillus subtilis -in
@natcomms.nature.com
www.nature.com/articles/s41...
loading . . .
Mechanism of lateral cell-wall expansion at a constant diameter in Bacillus subtilis - Nature Communications
In Escherichia coli, lateral cell-wall expansion during growth occurs by crosslinking of new glycan chains to the existing peptidoglycan network. Here, Liang et al. show a different mechanism in the G...
https://www.nature.com/articles/s41467-025-61900-0
0
14
4
reposted by
Carballido-López's lab
Paula Navarro
2 months ago
So happy to have contributed to this beautiful study led by PetrPelech! A combined theory–experiment effort based on our in situ cryo-ET data, revealing how stress-mediated growth shapes E. coli division site morphogenesis.
#teamtomo
🌐 🦠🔬❄️🐎 👉📄
doi.org/10.1073/pnas...
loading . . .
Stress-mediated growth determines Escherichia coli division site morphogenesis | PNAS
In order to proliferate, bacteria must remodel their cell wall at the division site. The division process is driven by the enzymatic activity of pe...
https://doi.org/10.1073/pnas.2424441122
0
18
6
reposted by
Carballido-López's lab
Janelia Research Campus
2 months ago
🐸 Imagine you’re sitting by a pond listening to the din of croaking frogs. What if you could use the changes in volume of the combined croaking to figure out how many frogs are in the pond? 🔬 That’s the idea behind a new method to count the individual molecules in fluorescence microscopy images.
loading . . .
New method enables scientists to surpass the resolution limit of fluorescence microscopy
A new method developed at Janelia enables researchers to count the individual molecules contained in a single spot of light detected by a fluorescence microscope—a quantity important for…
https://hhmi.news/444HufZ
0
9
2
reposted by
Carballido-López's lab
bioRxiv Microbiology
2 months ago
Phosphorylation by the PknB serine/threonine kinase stimulates dimer formation by WalR
https://www.biorxiv.org/content/10.1101/2025.07.12.664526v1
0
4
4
New paper from the Lab about the division delay during competence in Streptococcus pneumoniae, always happy to collaborate with the LMGM in Toulouse! 🍾🎉🔬 Study realised during the thesis of Dimitri Juillot, under the supervision of Rut Carballido-López and Nathalie Campo.
loading . . .
Transient inhibition of cell division in competent pneumococcal cells results from deceleration of the septal peptidoglycan complex - Nature Communications
Membrane protein ComM transiently inhibits cell division during competence development in Streptococcus pneumoniae through unclear mechanisms. Here, Juillot et al. show that ComM interacts with a puta...
https://www.nature.com/articles/s41467-025-60600-z
3 months ago
0
2
1
Congratulations to
@mervenurtunc.bsky.social
for a great defence, the conclusion of a fantastic PhD! 👏 🎊 🌹
3 months ago
0
4
1
reposted by
Carballido-López's lab
John Helmann
3 months ago
A new paper led by Ahmed Gaballa and Yesha Patel explores the pathways that reduce the dithiolopyrrolone (DTP) antibiotic thiolutin in B. subtilis. The active dithiol chelates intracellular Zn ions to impede growth.
#MicroSky
#Zinc
#Antibiotics
journals.asm.org/doi/10.1128/...
2
6
2
reposted by
Carballido-López's lab
Jörg Stülke
3 months ago
The
#SubtiWiki
Paper of the month for June 2025 has been selected. Congratulations,
@apbrogan.bsky.social
@
@harvardmed.bsky.social
@natmicrobiol.nature.com
subtiwiki.uni-goettingen.de/wiki/index.p...
0
6
3
reposted by
Carballido-López's lab
Janelia Research Campus
3 months ago
🥼 Janelia researchers are developing new tools to help accelerate biological discovery, like blinx – a new method that enables scientists to surpass the resolution limit of fluorescence microscopy. 🔬 🔗
www.janelia.org/news/new-met...
0
6
3
reposted by
Carballido-López's lab
Ákos T Kovács
3 months ago
Direct and indirect pathways linking the Lon protease to motility behaviors in the pathogen Pseudomonas aeruginosa
#PLOSPathogens
from
@krijonas.bsky.social
journals.plos.org/plospathogen...
loading . . .
Direct and indirect pathways linking the Lon protease to motility behaviors in the pathogen Pseudomonas aeruginosa
Author summary Proteases specifically degrade other proteins inside cells and constitute promising drug targets due to their central roles in cell physiology. In the human pathogen Pseudomonas aerugin...
https://journals.plos.org/plospathogens/article?id=10.1371/journal.ppat.1013288
0
5
4
reposted by
Carballido-López's lab
Guillaume Jacquemet
3 months ago
Are you looking for a postdoc? I will be looking for 2-4 people after the summer to join the lab !! Do not hesitate to reach out and disseminate !!
0
67
94
reposted by
Carballido-López's lab
Emmanuele Severi
3 months ago
Evolution of beta-lactam resistance in E. coli in the absence of beta-lactamase: v interesting besides the usual OM suspects popping out
www.nature.com/articles/s41...
loading . . .
Beta-lactamase dependent and independent evolutionary paths to high-level ampicillin resistance - Nature Communications
Bacterial resistance to beta-lactam antibiotics is on the rise, but laboratory evolution studies do not always recapitulate clinical resistance levels. Here, the authors select Escherichia coli mutant...
https://www.nature.com/articles/s41467-024-49621-2
0
14
11
reposted by
Carballido-López's lab
Nature Microbiology
3 months ago
🚨Out now!
#News&Views
Different forms of bacterial persistence in Bacillus subtilis are driven by a common (p)ppGpp-mediated switch that depletes GTP, triggering a rapid transition from a sensitive to an antibiotic-recalcitrant state.
#MicroSky
www.nature.com/articles/s41...
loading . . .
Flipping the magic switch to persistence via GTP depletion - Nature Microbiology
Different forms of bacterial persistence in Bacillus subtilis are driven by a common (p)ppGpp-mediated switch that depletes GTP, triggering a rapid transition from a sensitive to an antibiotic-recalci...
https://www.nature.com/articles/s41564-025-02045-0?utm_source=bluesky&utm_medium=social&utm_campaign=nmicrobiol
1
9
5
reposted by
Carballido-López's lab
anna brogan
3 months ago
Very happy to share that a large part of my thesis work is out today: B. subtilis uses the second messenger c-di-AMP to modulate its turgor pressure in response to the state of its cell envelope.
www.nature.com/articles/s41...
loading . . .
Cyclic-di-AMP modulates cellular turgor in response to defects in bacterial cell wall synthesis - Nature Microbiology
Brogan et al. uncover a signalling pathway in which levels of the nucleotide second messenger c-di-AMP increase in response to defects in cell wall synthesis. This regulatory pathway decreases turgor ...
https://www.nature.com/articles/s41564-025-02027-2
4
59
29
reposted by
Carballido-López's lab
ASM
3 months ago
Researchers uncover a new class of retropepsin-like proteases in P. aeruginosa that are required for biofilm formation & bacterial survival under stress conditions, including antibiotic exposure, making them appealing therapeutic targets.
#mBio
:
asm.social/2sq
1
17
10
reposted by
Carballido-López's lab
bioRxiv Microbiology
3 months ago
Enzymatic Activity of PBP1B Compensates for β-lactam Mediated Inhibition of PBP2 in Cells Overproducing ppGpp
https://www.biorxiv.org/content/10.1101/2025.06.12.659302v1
0
2
2
reposted by
Carballido-López's lab
bioRxiv Microbiology
4 months ago
Impaired envelope integrity in the absence of SanA is linked to increased Lipid II availability and an imbalance of FtsI and FtsW activities
https://www.biorxiv.org/content/10.1101/2025.06.10.658892v1
0
2
3
reposted by
Carballido-López's lab
Jan-Willem Veening
4 months ago
New tenure track assistant professor position in molecular microbiology in our department
@dmf-unil.bsky.social
@unil.bsky.social
! We are casting a wide net for an experimental molecular microbiologist. Apply here:
wwwfbm.unil.ch/releve/appli...
loading . . .
DMF: Tenure Track Assistant Professor towards Associate Professor in Molecular Microbiology - Site des postulations FBM
https://wwwfbm.unil.ch/releve/application/announce/show/133
0
112
170
reposted by
Carballido-López's lab
Félix Ramos-León
4 months ago
Excited to share our latest review! Check it out to see what we know so far about how Staphylococcus aureus coordinates key processes during its cell cycle
add a skeleton here at some point
4
40
20
reposted by
Carballido-López's lab
Séamus Holden 🔬🦠🧫
4 months ago
Update on initial results of testing GraceBiolabs potential replacement to Thermo Fisher GeneFrames, widely used for bacterial cell biology microscopy time lapses but soon to be discontinued
#microsky
#bioimaging
add a skeleton here at some point
1
9
5
reposted by
Carballido-López's lab
Journal of Cell Science
4 months ago
After the success of our 2023 Imaging Cell Dynamics conference, we’ll be hosting a second
#JCSImaging
meeting in 2026, organised by
@franbottanelli.bsky.social
,
@guijacquemet.bsky.social
,
@drmichaelway.bsky.social
& Giulia Zanetti. To register your interest:
www.biologists.com/meetings/jcs...
0
75
48
MreB filaments <3
4 months ago
1
6
0
reposted by
Carballido-López's lab
bioRxiv Microbiology
4 months ago
The interplay of membrane tension and FtsZ filament condensation on the initiation and progression of cell division in B. subtilis
https://www.biorxiv.org/content/10.1101/2025.05.18.654715v1
0
8
6
you reached the end!!
feeds!
log in