Matt Lycas
@lycasworks.bsky.social
π€ 262
π₯ 331
π 72
Neuroscientist and Super-Resolution Microscopist
reposted by
Matt Lycas
Jennifer Waters
about 21 hours ago
PIs & Group Leaders, do your trainees need to learn light microscopy and image analysis? Send them to us! Financial aid is available! Applications due Friday 1/30.
meetings.cshl.edu/courses.aspx...
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Quantitative Imaging: From Acquisition to Analysis
Cold Spring Harbor Laboratory Meetings & Courses -- a private, non-profit institution with research programs in cancer, neuroscience, plant biology, genomics, bioinformatics.
https://meetings.cshl.edu/courses.aspx?course=C-QICM&year=26
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reposted by
Matt Lycas
Kyle M. Douglass
2 days ago
I finally got around to writing the discussion section of our lab's basic training course on live cell
#microscopy
. I explain the tradeoffs involved in designing an imaging experiment and the art of thinking of the experiment as an optimization problem.
leb-epfl.github.io/basic_traini...
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Introduction - Microscopy Basic Training
https://leb-epfl.github.io/basic_training/chapter_intro/index.html#structure-and-duration
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reposted by
Matt Lycas
Jennifer Waters
9 days ago
π¬ π₯οΈ Applications are open for the CSHL course Quantitative Imaging: From Acquisition to Analysis (April 6β21, 2026)! An intensive, hands-on course covering advanced fluorescence microscopy and quantitative image analysis using open-source tools. ποΈ Apply online by Jan 30, 2026
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Quantitative Imaging: From Acquisition to Analysis
Cold Spring Harbor Laboratory Meetings & Courses -- a private, non-profit institution with research programs in cancer, neuroscience, plant biology, genomics, bioinformatics.
https://meetings.cshl.edu/courses.aspx?course=C-QICM&year=26
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Seal taking a nap off the coast of Cape Town
10 days ago
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reposted by
Matt Lycas
Paul & Virginie - Centriole Lab
21 days ago
A super detailed protocol + video on Cryo-ExM - Cryo-Expansion Microscopy, led by the labs of our former postdocs
@marinelap.bsky.social
&
@ebertiaux.bsky.social
. Clear, practical, and very useful for anyone doing nanoscale imaging π
app.jove.com/t/68595/expa...
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reposted by
Matt Lycas
Felipe Opazo
24 days ago
β¨ Blinking
#nanobodies
that work for single-molecule localization π¬ Our new preprint shows that the self-blinking dye JF635b restores robust, buffer-free blinking in
#nanobodies
, enabling reliable
#dSTORM
,
#MINFLUX
, and more, without chemical-switching buffers. Opening new possibilities for
#ExM
!
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reposted by
Matt Lycas
Pawel Burkhardt
29 days ago
Thrilled to see our review article "The evolutionary origins of synaptic proteins" highlighted on the cover of Nature Reviews Neuroscience π€©.
www.nature.com/articles/s41...
@msarscentre.bsky.social
π§ β¨π§¬ππͺΌπ§½
add a skeleton here at some point
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reposted by
Matt Lycas
Christophe π¬ L
29 days ago
New preprint showing how the membrane-associated periodic skeleton (MPS) restricts endocytosis in neurons:
www.biorxiv.org/content/10.6...
It nicely confirms our work from last year (
science.org/doi/10.1126/science.ado2032
) and extends it to other compartments in more mature neurons
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Membrane-associated periodic skeleton regulates major forms of endocytosis in neurons through a signaling-driven positive feedback loop
Endocytosis enables neurons to internalize molecules, maintaining homeostasis and responsiveness. The neuronal membrane-associated periodic skeleton (MPS), an actin-spectrin-based cytoskeletal lattice...
https://www.biorxiv.org/content/10.64898/2025.12.12.693977v1
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reposted by
Matt Lycas
Luc Reymβ¬nd
about 1 month ago
New paper from
@zhixingchen2.bsky.social
's lab! It turns out that, in addition to its very low phototoxicity, PKmito Deep Red (PKMDR) directly reports on mitochondrial membrane potential (MMP) in live cells through its lifetime!
www.nature.com/articles/s41...
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FLIM at the Biozentrum π¬
about 1 month ago
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Tardigrades looking BIG
about 2 months ago
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reposted by
Matt Lycas
The Company of Biologists
about 2 months ago
We are highlighting Jennifer Waters, a
@focalplane.bsky.social
Scientific Advisory Board member, Director of CITE, Harvard Medical School, and creator of MicroList (now featured in FocalPlane) and Microtutor, as an extraordinary biologist.
#100biologists
@jencwaters.bsky.social
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Expansion microscopy of a tardigrade I caught outside with the objective I got on eBay
2 months ago
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Bought more objectives on eBay
2 months ago
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Putting the eBay objective to good use
2 months ago
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Super resolution is super T cell Mitochondria labelled for MT-CO1
2 months ago
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Shout out eBay, part 1 of the home microscope
3 months ago
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Tardigrades in the mail
3 months ago
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Silver metal at Swiss BJJ Championship
3 months ago
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So happy to be at
#GEF25
thank you to the organisers and I canβt wait for all our future developments in expansion microscopy
4 months ago
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#GEF2025
Such a fantastic conference π₯³π₯³π₯³
4 months ago
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#GEF
4 months ago
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More Iterative expansion for a specific inner mitochondrial membrane protein
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5 months ago
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Iterative expansion microscopy for protein on the mitochondria inner membrane
5 months ago
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Great Cormorant, Preverenges Switzerland. Go birds
6 months ago
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Happy Physio!
6 months ago
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Go Physio!!!
6 months ago
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Happy Physio!
7 months ago
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New tattoo: Cajalβs microscope. His illustrations of cortical neurons, hippocampal neurons, synapses, and the brain. Shout out to Phil from the tattoo Lab for his brilliant work
8 months ago
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Cristae
8 months ago
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Mitochondria!
8 months ago
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Phase! Contrast!
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9 months ago
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Just testing out DIC on my cheek cells for a writing break
9 months ago
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reposted by
Matt Lycas
Erika Wee
9 months ago
@lycasworks.bsky.social
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Happy Expansion Microscopy Day at Quantitative Imaging
@qiatcshl.bsky.social
9 months ago
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reposted by
Matt Lycas
Suliana Manley
9 months ago
Our latest preprint
www.biorxiv.org/content/10.1...
, describes Willi Steppβs project to make smart microscopy even gentler by doing event detection in phase contrast. We developed neural networks to detect mito-LD and mito-lysosome contacts, as well as mitochondrial pre-fission constrictions.
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@fedegasparoli.bsky.social
science!
@qiatcshl.bsky.social
10 months ago
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Great imaging today at Quantitative Imaging at CSHL
@qiatcshl.bsky.social
#expansion
10 months ago
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Expansion microscopy of a tardigrade
10 months ago
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Demonstrating how local environment impacts fluorescence π¬π§ͺπ₯Ό@qiatcshl.bsky.social
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10 months ago
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reposted by
Matt Lycas
Florent Waltz
10 months ago
The final version of our work on the in-cell architecture of the mitochondrial respiratory chain is now online in
@science.org
π You can find the full story here
www.science.org/doi/10.1126/...
@verenaresch.bsky.social
did a wonderful job on the cover and animation, she really brought it to life π©βπ¨
add a skeleton here at some point
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reposted by
Matt Lycas
Brian Northan
10 months ago
If you are looking to do GPU deconvolution in Fiji checkout the new updates to CLIJ (OpenCL for ImageJ) deconvolution.
@nkiaru.bsky.social
has done updates to the tiled deconvolution and integrated with BigDataViewer, and I've added a new script for batch processing.
forum.image.sc/t/clij-openc...
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CLIJ (OpenCL for ImageJ) Deconvolution Update!
Hi In recent months @NicoKiaru has done a lot of work on tiled deconvolution and also helped get clijx-deconvolution onto a Fiji Update site. So we are happy to announce it is now much easier to rel...
https://forum.image.sc/t/clij-opencl-for-imagej-deconvolution-update/109933
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reposted by
Matt Lycas
Di Jiang
10 months ago
@science.org
A subcellular map of translational machinery composition and regulation at the single-molecule level | Science
www.science.org/doi/10.1126/...
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A subcellular map of translational machinery composition and regulation at the single-molecule level
Millions of ribosomes are packed within mammalian cells, yet we lack tools to visualize them in toto and characterize their subcellular composition. In this study, we present ribosome expansion micros...
https://www.science.org/doi/10.1126/science.adn2623
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Fluorescence Freitag!
10 months ago
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Tardigrade
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11 months ago
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Tardigrades and Rotifers
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11 months ago
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Great place for microscopy
11 months ago
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reposted by
Matt Lycas
Isi Molina-Riquelme
11 months ago
I'm so happy to share our work discussing nucleoid trafficking inside the mitochondrion and mitochondrial network, led by the amazing
@jmacuada.bsky.social
Available in
@cp-trendscellbio.bsky.social
www.cell.com/trends/cell-...
#mito
#mitochondria
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How are mitochondrial nucleoids trafficked?
Mitochondria harbor their own DNA (mtDNA), which codifies essential proteins of the oxidative phosphorylation (OXPHOS) system and locally feeds them to their surrounding inner mitochondrial membrane (...
https://www.cell.com/trends/cell-biology/abstract/S0962-8924(24)00272-1
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reposted by
Matt Lycas
Juan C. Landoni π¬
11 months ago
The magic of the live
#mito
straight from the microscope π¬ for
#FluorescenceFriday
- brought to you by
#SYBRgold
π’ and
#PKMO
π
@spirochrome.com
@carolinklose.bsky.social
@lycasworks.bsky.social
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Awesome modelling by
@askeejdrup.bsky.social
!! Great Investigation to links between dopamine dynamics and DAT nanodomains!!! In
@elife.bsky.social
: Computational modelling identifies key determinants of subregion-specific dopamine dynamics in the striatum
doi.org/10.7554/eLif...
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Computational modelling identifies key determinants of subregion-specific dopamine dynamics in the striatum
https://doi.org/10.7554/eLife.105214
11 months ago
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