Jakob Troidl
@jakobtroidl.bsky.social
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ai scientist @janelia • @harvard cs phd • ml / data vis for neuro / connectomics
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Jakob Troidl
Virginie Uhlmann
3 days ago
Check out
@cfusterbarcelo.bsky.social
's latest cool work! Domain shift, we are watching you 👀👀👀
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Jakob Troidl
Cedric Allier
8 days ago
Graph neural networks recover interpretable circuit models from neural activity
saalfeldlab.github.io/flyvis-gnn/
@HHMIJanelia @AllenInstitute to be presented at @CosyneMeeting
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Linda Ulmer
7 days ago
Looking forward to presenting our work on connectome-constrained modeling at
#cosyne2026
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Konrad Kording
7 days ago
In two hours we (with gunnar blohm and jordan matelsky) will run a webinar talking about our philosophy for doing good science and becoming good at science. And the tool
planyourscience.com
I wrote to help. If you want to join us you can sign up here:t.co/OJOQe1Ly18
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Scientific Paper Planner - AI-Powered Research Planning
Structure your scientific research with AI-powered guidance. From hypothesis to methodology, plan your research paper with intelligent mentoring.
http://planyourscience.com
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Made it across the pond to Heidelberg for the AI & Biology conference at EMBL, then Lisbon for COSYNE. Looking forward to catching up with people and talking connectomics, AI for bio-image analysis, and more.
8 days ago
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Jan Funke
13 days ago
We opened 4 PhD positions at
@humantechnopole.bsky.social
together with Polimi (see 👇). My lab offers a PhD project on "Computational Morphogenesis": use state-of-the-art machine learning methods together with realistic simulations to build digital twins of developing tissue. Apply by March 26.
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Jakob Troidl
Casey Schneider-Mizell
25 days ago
From
@bdpedigo.bsky.social
: a super efficient, highly reliable, and very generalizable method for mesh structure classification, applied here to spine detection across basically every synapse onto a cell in the MICRoNS dataset.
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Jakob Troidl
Stephan Saalfeld
20 days ago
Join us in building foundational datasets and models for microscopy with
@jakobtroidl.bsky.social
and many others AI Engineer Pre-Training:
lnkd.in/eyEEV5nm
AI Engineer Post-Training:
lnkd.in/eShVQ3y9
Data Engineer Data:
lnkd.in/eCvm58xH
Data Engineer Pipelines:
lnkd.in/ec6qGJkX
ai.hhmi.org
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Accelerating Innovation in Biology
HHMI’s $500 million over the next 10 years will support AI-driven projects and embed AI systems throughout the scientific process in labs across HHMI.
https://ai.hhmi.org/
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