@dimitristypas.bsky.social
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📥 403
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Senior editor
@naturesmb.bsky.social
. Views and opinions are personal.
pinned post!
The September
@natsmb.nature.com
issue is out!
www.nature.com/articles/s41...
We feature very interesting papers on ubiquitylation and degradation. Really excited to continue to serve the proteostasis and PTMs communities and publish conceptually insightful work.
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Focus on ubiquitylation and protein degradation - Nature Structural & Molecular Biology
We highlight primary research and commissioned content that delve into the biology of ubiquitylation and degradation mechanisms.
https://www.nature.com/articles/s41594-025-01672-9
6 days ago
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The September
@natsmb.nature.com
issue is out!
www.nature.com/articles/s41...
We feature very interesting papers on ubiquitylation and degradation. Really excited to continue to serve the proteostasis and PTMs communities and publish conceptually insightful work.
loading . . .
Focus on ubiquitylation and protein degradation - Nature Structural & Molecular Biology
We highlight primary research and commissioned content that delve into the biology of ubiquitylation and degradation mechanisms.
https://www.nature.com/articles/s41594-025-01672-9
6 days ago
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reposted by
Nature Reviews Molecular Cell Biology
14 days ago
New Online! Learning about break-induced replication from bacteriophages
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Learning about break-induced replication from bacteriophages
Nature Reviews Molecular Cell Biology, Published online: 09 September 2025; doi:10.1038/s41580-025-00898-1Break-induced replication (BIR), a DNA double-strand break repair mechanism, was first studied in the 1960s in bacteriophages, showing that DNA could recombine by a 'break–copy' mechanism.
https://bit.ly/484UsxS
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A captivating read on a very interesting topic, the closer-than-anticipated relationship between ubiquitin and ADP-ribose just out
@natsmb.nature.com
www.nature.com/articles/s41...
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The rise of ADP-ribose–ubiquitin - Nature Structural & Molecular Biology
Post-translational modifications show mechanistic crosstalk, exemplified by the ADP-ribose–ubiquitin hybrid signal, in which one post-translational modification modifies another. This Comment highlights its discovery, mechanistic basis and functional consequences, and outlines critical questions for understanding this emerging signaling paradigm.
https://www.nature.com/articles/s41594-025-01651-0
15 days ago
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reposted by
The Groth lab
26 days ago
We have lift off!! 🚀 Yesterday was the official opening of EpiC! The DNRF Center for Epigenetic Cell Memory at the Danish Cancer Institute! Our EpiC team with director Anja Groth
@groth-anja.bsky.social
, were joined by Jesper Fisker, CEO
@cancer.dk
& Niels Mejlgaar, CEO
@dg.dk
to celebrate 🎉
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reposted by
mhverlhac.bsky.social
26 days ago
Three-Year Funded Postdoctoral Position to study organelle architecture in mammalian oocytes – Terret-Verlhac Lab, CIRB, Collège de France (Starting 2026). For more information, please contact:
[email protected]
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This insightful manuscript implicating STAG3 in mitotic, rather than the known meiotic, control of chromatin architecture came out a couple of days ago. Glad to see it in our pages
@natsmb.nature.com
and I am looking forward to see what the community will think
www.nature.com/articles/s41...
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The mitotic STAG3–cohesin complex shapes male germline nucleome - Nature Structural & Molecular Biology
Nagano et al. identify the third mitotic cohesin complex, STAG3–cohesin, which, with its unique biophysical properties, weakens insulation and rewires regulatory interactions of spermatogonial stem ce...
https://www.nature.com/articles/s41594-025-01647-w
27 days ago
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reposted by
Anders Sejr Hansen
28 days ago
Congratulations to Masahiro Nagano on his new paper on STAG3-cohesin. STAG3-cohesin has a much shorter residence time which leads to altered 3D genome organization and STAG3-cohesin is important for male germ cell differentiation.
www.nature.com/articles/s41...
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@natsmb.nature.com
has published three pieces on scientists returning to their country of origin after working abroad.
www.nature.com/nsmb/article...
Two more will come out. The most recent one by
@hanasedlackova.bsky.social
hits home for me, a very interesting read.
www.nature.com/articles/s41...
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Returning home: there and back again in Czechia - Nature Structural & Molecular Biology
Returning to Central Europe was appealing and challenging. Here, I reflect on my part in rebuilding a research career in Czechia and fostering a collaborative scientific community across the region.
https://www.nature.com/articles/s41594-025-01642-1
about 1 month ago
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reposted by
Hana Polasek-Sedlackova
about 2 months ago
📢 Excited to share my World View article, just published in @NatureSMB, where I reflect on returning to Czechia and building research group grounded in collaboration🤝, resilience and curiosity💡.
www.nature.com/articles/s41...
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https://nature.com/articles/s4159…
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reposted by
Katarzyna Ciazynska
about 2 months ago
Another installment of the 'Returning home" series at NSMB. This time, we're returning to Poland! Read below the piece from Lidia Wróbel from IIMCB, Warsaw
add a skeleton here at some point
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Out
@natsmb.nature.com
a great Q&A with
@fmattiroli.bsky.social
. I really enjoyed reading it and I am very happy that Francesca had the time to work with us.
www.nature.com/articles/s41...
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Q&A with Francesca Mattiroli - Nature Structural & Molecular Biology
Francesca Mattiroli leads a research group at the Hubrecht Institute in Utrecht in the Netherlands, delving into the dynamics of chromatin during DNA synthesis. Here we ask her about her research etho...
https://www.nature.com/articles/s41594-025-01620-7
about 2 months ago
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Did not have time to post about this before vacation. Such a joy to have this chat with
@davidlabmsk.bsky.social
and Nobel Laureate Charles Rice on Yael's amazing work, capitalising on chromatin biology to understand hepatitis.
www.nature.com/articles/s41...
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Q&A with Yael David and Charles Rice on using chromatin biology to understand hepatitis - Nature Structural & Molecular Biology
Yael David leads her lab focused on studying the fundamental mechanisms of epigenetic regulation of transcription at Memorial Sloan Kettering Cancer Center, and Charles Rice is the Maurice R. and Cori...
https://www.nature.com/articles/s41594-025-01613-6
about 2 months ago
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reposted by
Cold Spring Harbor Laboratory
3 months ago
Working with collaborators at the Crick Institute and the University of Utah, CSHL's President and CEO Bruce Stillman explores how pre-replicative complexes (pre-RCs)—even earlier than ORCs—assemble to initiate DNA replication in all plants, animals, and fungi.
add a skeleton here at some point
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Scientists travel to work. Some continue to travel during their career, some set roots to an adopted country, some return.
@natsmb.nature.com
will publish 5 pieces on those that returned. The first one discusses Dr. Gomes Dias' return to Brazil. Touching and inspiring.
www.nature.com/articles/s41...
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LinkedIn
This link will take you to a page that’s not on LinkedIn
https://lnkd.in/dn_VpR-6
3 months ago
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reposted by
Janet Iwasa
3 months ago
Check out this new review (with animations, natch) of mechanisms of licensing origins of DNA replication - a wonderful (and continuing!) collaboration with Bruce Stillman
@cshlnews.bsky.social
and John Diffley
@crick.ac.uk
!
www.nature.com/articles/s41...
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Out
@natsmb.nature.com
a Review on origin licensing with probably the most comprehensive (and coolest!) movies on how pre-RC assembly works. Decades of structural and biochemical work are beautifully illustrated. Kudos to Janet Iwasa, John Diffley and Bruce Stillman.
www.nature.com/articles/s41...
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Mechanisms for licensing origins of DNA replication in eukaryotic cells - Nature Structural & Molecular Biology
Here, the authors comprehensively discuss the different mechanisms for origin licensing in yeast and human cells. Importantly, they present intuitive videos illustrating such mechanisms with unprecede...
https://www.nature.com/articles/s41594-025-01587-5
3 months ago
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@natsmb.nature.com
recently published a very interesting pair of insightful studies on the role of H2A.Z during oocyte maturation by the labs of Wei Xie, Yu Zhang, and Yunlong Xiang,
nature.com/articles/s41...
, and the lab of Azusa Inoue,
www.nature.com/articles/s41...
.
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H2A.Z is essential for oocyte maturation and fertility in female mouse - Nature Structural & Molecular Biology
Xu et al. establish the importance of H2A.Z in mouse oocyte development. H2A.Z is incorporated into chromatin at promoters and putative enhancers, and its presence promotes histone acetylation in full...
http://nature.com/articles/s41594-025-01580-y
3 months ago
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This editorial details why we think it's a good idea to standarise reporting of microscopy data and what we are doing towards that. I also feel that it is both important and a step towards helping the community.
www.nature.com/articles/s41...
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Reporting light microscopy data in our pages - Nature Structural & Molecular Biology
We outline a pilot starting at several Nature Portfolio journals aimed at improving and standardizing the reporting of light and fluorescence microscopy experiments.
https://www.nature.com/articles/s41594-025-01605-6
3 months ago
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reposted by
Akis (Argyris) Papantonis
3 months ago
This is a piece that I and
@karsten-rippe.bsky.social
discussing a lot, and a topic that is very close to my heart. The editors
@naturerevgenet.bsky.social
gave us the stage to do so, and the final version of our review is now available under this link:
rdcu.be/erP1u
A short thread follows 1/n
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reposted by
Amy Strom
3 months ago
If heterochromatin is really a liquid-like condensate, why is it not spherical? We investigated whether mechanical interactions between a condensate and a fiber network can explain the variety of morphologies seen in phase-separated nuclear compartments
www.biorxiv.org/content/10.1...
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reposted by
Nature Biotechnology
3 months ago
Go fund a brain gain The gutting of US research funding represents a once-in-a-generation opportunity for Europe to boost world-class research deprioritized by the Trump administration
go.nature.com/4jGhU6V
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reposted by
Duncan Sproul
3 months ago
Come and work with our new colleague on very cool project!
add a skeleton here at some point
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So excited to share that we
@natsmb.nature.com
are hiring a new editor! If you are interested about working with an intelligent, compassionate and funny team helping scientists publish great research, please consider applying. Deadline June 20th.
springernature.wd3.myworkdayjobs.com/SpringerNatu...
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Associate or Senior Editor (Nature Structural & Molecular Biology and Nature Communications)
Job Title: Associate or Senior Editor (Nature Structural & Molecular Biology and Nature Communications) Location: New York, Shanghai, Beijing, Madrid or Milan Closing date: June 20th About Springe...
https://springernature.wd3.myworkdayjobs.com/SpringerNatureCareers/job/New-York/Associate-or-Senior-Editor--Nature-Structural---Molecular-Biology-and-Nature-Communications-_JR103091-1
3 months ago
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reposted by
Daniel Ibrahim
4 months ago
How to find Evolutionary Conserved Enhancers in 2025? 🐣-🐭 Check out our paper - fresh off the press!!! We find widespread functional conservation of enhancers in absence of sequence homology Including: a bioinformatic tool to map sequence-diverged enhancers!
rdcu.be/enVDN
github.com/tobiaszehnde...
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Conservation of regulatory elements with highly diverged sequences across large evolutionary distances
Nature Genetics - Combining functional genomic data from mouse and chicken with a synteny-based strategy identifies positionally conserved cis-regulatory elements in the absence of direct sequence...
https://rdcu.be/enVDN
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Dr. Basto recaps and discusses in this N&Vs
www.nature.com/articles/s41...
two very interesting TRIM37-mTOCs papers recently out
@natsmb.nature.com
, by the labs of Prof. Holland
www.nature.com/articles/s41...
and Prof. Oegema and Desai
www.nature.com/articles/s41...
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TRIMming centrosomal assemblies - Nature Structural & Molecular Biology
Centrosomal protein assemblies can lead to mitotic spindle dysfunction and abnormal cell division. Two studies published in this issue unveil the molecular choreography orchestrated by TRIM37 in block...
https://www.nature.com/articles/s41594-025-01549-x
4 months ago
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Branched ubiquitin chains are both very interesting and somewhat lagging behind in how well we understand them. Insightful work by @samuelmaiwald.bsky.social from the lab of Brenda Schulman now out @
[email protected]
delineating a key player, TRIP12.
www.nature.com/articles/s41...
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TRIP12 structures reveal HECT E3 formation of K29 linkages and branched ubiquitin chains - Nature Structural & Molecular Biology
Using biochemistry, chemical biology, and cryo-EM, Maiwald et al. elucidate how TRIP12 forms K29 linkages and K29/K48-linked branched ubiquitin chains, revealing a mechanism for polyubiquitylation sha...
https://www.nature.com/articles/s41594-025-01561-1
4 months ago
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@natsmb.nature.com
has launched new content this month, namely Q&As. This interview with Dr. Joseph
@jerelleaj.bsky.social
www.nature.com/articles/s41...
highlights what's great about these pieces. Get to learn about the scientist and their interesting work (consensates/computational biol)!
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Jerelle Joseph: seeing biomolecular condensates with computation - Nature Structural & Molecular Biology
Jerelle Joseph is an assistant professor at the Department of Chemical and Biological Engineering and the Omenn–Darling Bioengineering Institute at Princeton University in New Jersey. We contacted Jer...
https://www.nature.com/articles/s41594-025-01564-y
4 months ago
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For the DNA polymerase θ afficionados:
www.nature.com/articles/s41...
This N&Vs by Sylvie Doublié nicely contextualises the progress imparted by this NSMB paper
www.nature.com/articles/s41...
by @landerlab.bsky.social and this NatComms paper
www.nature.com/articles/s41...
by the Chen/Pomerantz labs
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Making 3′ ends meet - Nature Structural & Molecular Biology
Two papers offer a first glimpse at complexes of the helicase-like domain of DNA polymerase θ (Polθ-HD) bound to DNA. Together, they provide structural insights into how the dimeric form of Polθ-HD gr...
https://www.nature.com/articles/s41594-025-01578-6
4 months ago
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reposted by
Nature Structural & Molecular Biology
4 months ago
On 9 May 2025, we launched the Artificial Intelligence Methodology in Structural Biology Collection between: Communications Biology, Nature Communications, Nature Structural & Molecular Biology, and Scientific Reports.
www.nature.com/collections/...
We are looking forward to your submissions!
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Artificial Intelligence Methodology in Structural Biology
In this joint collection between Communications Biology, Nature Communications, Nature Structural & Molecular Biology, and Scientific Reports, we invite ...
https://www.nature.com/collections/jbdjhghacg
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reposted by
Nature Structural & Molecular Biology
4 months ago
NSMB is also part of the DNA repair and human disease collection, with Communications Biology, Nature Chemical Biology, Nature Communications, and Scientific Reports.
www.nature.com/collections/...
NSMB has been a welcoming venue for insightful genome stability studies, hoping to continue to do so.
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DNA repair and human disease
This cross-journal Collection between Nature Communications, Communications Biology and Scientific Reports welcomes submissions on the mechanisms of DNA ...
https://www.nature.com/collections/ehffcdddfb
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reposted by
Malte Gersch
5 months ago
Super happy to share that our work on the specific inhibition of USP30 - a clinical stage Parkinson's drug target - is now online at NSMB
www.nature.com/articles/s41...
Have a read if you fancy chimeric protein engineering or a framework for DUB ligandability. Huge congratulations to Nafizul & team!
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Chimeric deubiquitinase engineering reveals structural basis for specific inhibition of the mitophagy regulator USP30 - Nature Structural & Molecular Biology
Kazi et al. report the crystal structure of the mitochondrial deubiquitinase USP, a clinical stage Parkinson’s disease drug target, in complex with a specific inhibitor. The authors delineate a framew...
https://www.nature.com/articles/s41594-025-01534-4
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Out today and I feel that I have to explicitly mention this very interesting story by the lab
@maltegersch.bsky.social
, developing specific inhibitors for the key mitophagy regulator USP30, based on a potential unifying and exploitable facet of USPs.
www.nature.com/articles/s41...
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Chimeric deubiquitinase engineering reveals structural basis for specific inhibition of the mitophagy regulator USP30 - Nature Structural & Molecular Biology
Kazi et al. report the crystal structure of the mitochondrial deubiquitinase USP, a clinical stage Parkinson’s disease drug target, in complex with a specific inhibitor. The authors delineate a framew...
https://www.nature.com/articles/s41594-025-01534-4
5 months ago
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reposted by
Todd Macfarlan
5 months ago
I am looking for postdocs to join my group at NIH. Are you interested in Development, Evolution, Genetics, Genomics, and Human health? Please apply!
www.training.nih.gov/jobs/pdf-mb-...
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https://www.training.nih.gov/jobs/pdf-mb-070125/
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Many interesting articles recently out
@natsmb.nature.com
. Here two that piqued my interest:
www.nature.com/articles/s41...
, another example of insightful work on the mechanisms of early development,
www.nature.com/articles/s41...
, another example of genomics technique development with XCI insight
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The subcortical maternal complex safeguards mouse oocyte-to-embryo transition by preventing nuclear entry of SPIN1 - Nature Structural & Molecular Biology
Here, the authors identify SPIN1 as a member of the subcortical maternal complex (SCMC). The SCMC component FILIA protects H3K4me3 reprogramming and zygotic genome initiation by preventing nuclear ent...
https://www.nature.com/articles/s41594-025-01538-0
5 months ago
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reposted by
Susan Shao
5 months ago
Cup? Platter? Stained glass? Our imaginations were inspired (even during uncertain times!) by these beautiful molecular complexes: the Erlin and prohibitin complexes implicated in quality control at the ER and mitochondria, respectively. Check them out here:
www.biorxiv.org/content/10.1...
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Finally for today, a collaborative effort led by the lab of
@zeqiraj.bsky.social
discovers molecular glues for BRISC, a deubiquitylating enzyme regulating inflammatory signalling. A delightful read here:
www.nature.com/articles/s41...
and the authors original thread here:
bsky.app/profile/zeqi...
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5 months ago
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Another insightful piece recently out
@natsmb.nature.com
delineating how Shigella utilises its effector IpaH1.4 to counteract host RNF213-induced LPS ubiquitylation. Very interesting work by the lab of
@felixrandow.bsky.social
. If you want to, have a go at it:
www.nature.com/articles/s41...
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Shigella flexneri evades LPS ubiquitylation through IpaH1.4-mediated degradation of RNF213 - Nature Structural & Molecular Biology
Naydenova, Boyle and Pathe et al. report that Shigella uses the ubiquitin E3 ligase IpaH1.4 to evade lipopolysaccharide ubiquitylation in infected cells by degrading the host E3 ligase RNF213. Using c...
https://www.nature.com/articles/s41594-025-01530-8
5 months ago
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We
@natsmb.nature.com
recently published an insightful manuscript on ubiquitin-independent proteasomal degradation via the NUB1-FAT10 axis by the lab of Andreas Martin. A very interesting read found here:
www.nature.com/articles/s41...
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NUB1 traps unfolded FAT10 for ubiquitin-independent degradation by the 26S proteasome - Nature Structural & Molecular Biology
Here, Arkinson et al. reconstitute NUB1-mediated FAT10 degradation by the human 26S proteasome and use biochemistry, cryo-EM and hydrogen–deuterium exchange to show that NUB1 acts as an ATP-independen...
https://www.nature.com/articles/s41594-025-01527-3
5 months ago
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I am bit late to write about this perspective but I thought I would be remiss not to mention it. In this manuscript, the authors contextualise the importance of accurately intepreting dual-reporter results and propose minimal guidelines to ensure such accuracy.
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Guidelines for minimal reporting requirements, design and interpretation of experiments involving the use of eukaryotic dual gene expression reporters (MINDR) - Nature Structural & Molecular Biology
Here, the authors discuss dual-reporter systems and confounding variables that may lead to misinterpretation of results. They propose guidelines for robust design, physiological interpretation and acc...
https://www.nature.com/articles/s41594-025-01492-x
6 months ago
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reposted by
MRC Laboratory of Molecular Biology
6 months ago
How do cytosol-invading bacteria evade LPS ubiquitylation by the host's defence machinery?
@felixrandow.bsky.social
's group determined that Shigella flexneri uses IpaH1.4 to degrade the LPS ligase RNF213, inhibiting the cell's ubiquitylation abilities. Read more:
tinyurl.com/3y4kv2bp
#LMBResearch🧪
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reposted by
Luijsterburglab
6 months ago
A must for all DNA repair aficionados! Egmond DNA Repair Meeting → April 19–24, 2026 🇳🇱 ✔️ Confirmed top speakers ✔️ Ample opportunities for talks & posters Don’t miss it:
dnarepairmeeting-egmond2026.com
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