Data Terra, the EOSC thematic node for the environment, demonstrated how the Galaxy platform accelerates environmental research through interoperable, FAIR data workflows within the EOSC Federation. From satellite plumes to ecosystem blooms. (1/2)

We’re inviting Expressions of Interest to join the GCC2026 Scientific Committee. If you’re passionate about open science, training, and community-driven research, we’d love to hear from you! Please fill out the Expression of Interest form: forms.gle/gp4DhnCBA16n...

The recent openRxiv meeting was a chance to present a vision for the future: a network of organizations working together to improve science communication and an ‘article of the future’ that is a constellation of linked web objects. openrxiv.org/openrxiv-day/

What an incredible two days! Reposting this with so much appreciation for everyone who made the 2025 International OME-NGFF workshop such a special event. Thanks everyone for coming & especially everyone of the BVC team to help pull this off!

Galaxy showed up strong at Genome Informatics 2025 with new posters, new tools, and new ideas for making genomics more open and accessible. Catch the highlights from Anton Nekrutenko, Mike Schatz, and Delphine Larivière 👉 galaxyproject.org/news/2025-11...

Collaboration and innovation with the Galaxy Europe team https://galaxyproject.org/news/2025-10-20-galaxy-guest-researcher/ ##UseGalaxy ##GalaxyProject ##EOSC

From the @narjournal.bsky.social #NARDatabaseIssue | ProteomeXchange consortium in 2026: making proteomics data #FAIR | #Bioinformatics #Proteomics #OpenScience 🧪🔓 ⬇️ academic.oup.com/nar/article/...

Switzerland is joining Horizon Europe! We are uniting two research powerhouses. For cutting-edge innovation that will boost our energy security, digital transformation, health and so much more. Today is a good day for science, and for our EU-Switzerland partnership.

🇨🇭 🇪🇺 Federal Councillor Guy Parmelin and EU Research Commissioner Ekaterina Zaharieva signed the Swiss-EU Programme Agreement (#EUPA) in Bern. This means that Switzerland is once again definitively associated with #HorizonEurope, the world's largest research programme. ➡️ sohub.io/4tjw 📷 WBF/DEFR

European Galaxy Days 2025 might be over, but the talks aren’t. Explore our new playlist featuring highlights from EGD2025 YouTube Playlist: https://youtube.com/playlist?list=PLNFLKDpdM3B9YxK0suz3VN-dSaKmWAhk-&si=tLCu61CpkgGiplaw News Item: (1/2)

Recordings from posit::conf(2025) now on YouTube: www.youtube.com/playlist?lis... #Rstats

From @ngehlenborg.bsky.social & colleagues in @plos.org #Computational #Biology | Ten simple rules for making biomedical data resources accessible | I like Rule 10:Focus on progress over perfection | #Education #Bioinformatics #PLOSCBTSR #OpenScience 🧬 🖥️ 🧪 🔓 ⬇️ journals.plos.org/ploscompbiol...

We recently published Metagraph [1] & polished the website to made it usable/stable/efficient for more users. Check out AI summary/tax. id feature [2]. Search in 17PB indexed sequences takes ≈3min on single server. Try! [1] www.nature.com/articles/s41... [2] metagraph.ethz.ch/results?sear...

Hybrid untargeted and targeted RNA sequencing facilitates genotype-phenotype associations at single-cell resolution #SingleCell 🧪🧬🖥️ https://www.biorxiv.org/content/10.1101/2025.11.06.686971v1

1/ Everyone’s chasing AI. But in bioinformatics, solid foundations still win. Here’s why mastering the basics matters more than ever. 🧵

The James P. Taylor Foundation for Open Science is pleased to announce the recipients of the 2025 JXTX+CSHL Genome Informatics Scholarships. JXTX provides support for students to attend conferences in CompBio and data science, where they can present their work [1/8]

If you're at Genome Informatics ##GI2025 this week, be sure to stop by the 3 Galaxy posters to chat with Delphine, Mike and Anton about great new things in Galaxy. (1/5)

Ben Langmead @benlangmead.bsky.social delivers the official opening for this year's Genome Informatics Conference #GI2025 at Cold Spring Harbor Laboratory. List of talks and posters: meetings.cshl.edu/abstracts.as...

well done Björn !

As new human assemblies become available on beta.ensembl.org - which human reference genome will you choose? This article explores the question with insights from Ensembl’s own Fergal Martin - www.nature.com/articles/s41... #HumanGenomics #Pangenomes #ReferenceGenomes

🌿 Ready to hack biodiversity with Galaxy? Join the GTN Ecology Training & Collaboration Fest — three days of hands-on learning, data exploration, and open-science fun! 📅 Nov 25–27 | Hybrid (Concarneau 🇫🇷 + online) 📝 Register for free by Nov 20 training.galaxyproject.org/training-mat...

🧠 Your Galaxy history too complex? Name tags make it easy to track dataset origins and relationships across analyses—no endless renaming needed https://galaxyproject.org/news/2025-11-4-tags/ ##GalaxyProject ##Bioinformatics ##Reproducibility

Next @denbi.bsky.social #training course with @embl.org: 🧬📊 Unlock your research potential - #DataCarpentry workshop, Feb 2–6, 2026 in Heidelberg & Barcelona. Learn data management, #R programming, visualisation & bio data analysis. See: www.denbi.de/training-cou... #LifeScience #Bioinformatics

Today, a global community of hackers gathers in Berlin 🇩🇪 for the start of #BioHackEU25. Since 2019, over 2200 participants have gathered together for an intense week of collaboration to advance 275 projects. Read the news: https://loom.ly/6sE_kdI

Preprints are: 🎇 Free to read 🎇 Free to post 🎇 Accessible worldwide But the benefits don't end there! Want to learn how you can benefit from posting a preprint? Visit our website to learn more! 👉 buff.ly/XHCS3Bb

🐛 Galaxy not working? Don't suffer in silence — report it! Use the built-in reporting feature when something goes wrong. Read more here: https://galaxyproject.org/news/2025-10-30-squish-the-bug/ Let's make Galaxy better together!

🚀 Bioconductor 3.22 is released! Thanks to all developers and community members for contributing to the project! 🔗 Please see the full release announcement here: bioconductor.org/news/bioc_3_...

Here is the schedule for the next TriRhena Gene Regulation Club at the FMI @fmiscience.bsky.social in Basel 🇨🇭 next week (5 Nov 2025; 14:00-18:45). Exciting topics ahead & we are looking forward to the #newPI talks by @julianeg.bsky.social (MPI) & Anupama Hemalatha (FMI). www.ie-freiburg.mpg.de/grc

Workflows by day, French wine and cheese by night 🍷🧀 Get ready to join us in Clermont-Ferrand, France for #GCC2026, June 22–26 2026! Learn, collaborate, and celebrate open science in the heart of Auvergne. galaxyproject.org/news/2025-10...

Join our interdisciplinary online workshop on the Galaxy platform! Nov 6, 2025 | 13:30–16:05 (CET) Learn how to build reproducible data analysis workflows using Galaxy, a powerful, user-friendly platform. The session is intended for the Swiss rsrch community. Register forms.gle/Y3vxW1u62FLM...

🌌🧬 The legendary hands-on @galaxyproject.bsky.social workshop is back—don’t miss out! 📅 March 9–13, 2026 | 📍 Uni Freiburg Beginners welcome—learn QC, #ChIP-seq, #RNA-seq, variant calling & #microbiome analysis in Galaxy! 🔗 More info: training.galaxyproject.org/training-mat... #useGalaxy #NGS

There is a little known Galaxy feature called "window manager". See how to use it ... https://galaxyproject.org/news/2025-10-28-window-manager/

🧬 EuroBioC2026 is coming to Turku, Finland, from June 3–5, 2026! Expect 3 exciting days with the Bioconductor community, showcasing the latest advances in Bioconductor software and emerging technologies shaping computational biology. 👉 More details soon at eurobioc2026.bioconductor.org

Three FMI researchers—Nanci Winke, @neuramos.bsky.social & @lukas-anneser.bsky.social—have received @snsf.ch Ambizione Grants! Their projects explore how emotions shape behavior, how the brain responds to anxiety treatments, and how brain states affect learning & memory 🧠 www.fmi.ch/news-events/...

🌿 Will you be at #PAG33? Galaxy will be in San Diego for the International Plant & Animal Genome Conference (Jan 9–14, 2026), and we’d love to know who from the Galaxy Community will be there! Let us know 👉 forms.gle/26PRwMH46aho...

TLDR; The PSF has made the decision to put our community and our shared diversity, equity, and inclusion values ahead of seeking $1.5M in new revenue. Please read and share. pyfound.blogspot.com/2025/10/NSF-... 🧵

Save the date: #BOSC2026 (www.open-bio.org/events/bosc) will take place July 13-14 in Washington, DC, as part of ISMB 2026 (July 12-16). We hope you will join us in person or online! 🍐 #Bioinformatics #OpenSource

For over 20 years, the mouse model organism has helped scientists uncover the biology behind human health and disease. But the mouse reference genomes still have missing pieces. The first collection of telomere-to-telomere mouse genomes are now available for two key mouse strains. 🧬💻

📣 ELIXIR, @eurobioimaging.bsky.social, @instruct-eric.bsky.social & @embl.org joined forces to establish 🙌 the #EOSC Life Sciences Connect Node: https://loom.ly/9BLk_tY#EOSC #EOSC_Federation

#OAWeek 💡Today’s #ELIXIRFridayReads, we are revisiting the ELIXIR position paper on the importance of #opendata infrastructure for European 🌍 competitiveness in #lifesciences. What actions are needed to secure its future? Read the paper 👉 https://loom.ly/ZjbrX2c#OAWeek

Specification for RO-Crate 1.2 released https://galaxyproject.org/news/2025-06-04-ro-crate-1-2-release/ ##UseGalaxy ##GalaxyProject ##EOSC ##EuroScienceGateway ##rocrate ##fair ##research_data ##research ##data

Use parallel-download to get data from NCBI SRA. See how here -> https://galaxyproject.org/news/2025-10-23-sra-download/

Know How Sciensano harnesses Galaxy for Advanced Microbial Genomics, Precision Typing, and Rapid Outbreak Detection http://galaxyproject.org/news/2025-04-25-galaxy-at-sciensano/ ##UseGalaxy ##GalaxyProject ##EOSC ##EuroScienceGateway

another fascinating collaboration with the Turco lab @fmiscience.bsky.social www.biorxiv.org/content/10.1...

Galactic views on the Conference on Research Data Infrastructure (CoRDI): https://galaxyproject.org/news/2025-08-29-cordi/ ##UseGalaxy ##GalaxyProject ##NFDI ##UniFreiburg ##RDM

📝 New blog post Released! https://galaxyproject.org/news/2025-02-13-cellxgene-vip/ CELLxGENE-VIP (Visualization In Plugin) is an extension of the original CELLxGENE: https://github.com/chanzuckerberg/cellxgene tool developed by the Chan Zuckerberg Initiative. It can efficiently extract deep (1/4)

Thank you, Dr. Malvika Sharan, for your powerful #SciPy2025 keynote 💛 You reminded us that the most powerful "intelligence" is community. Cultivating diverse, engaged people is essential for ethical, sustainable tech and a responsible scientific future. 🚀

Discover one of Galaxy’s true superpowers — dataset collections! 🌟 Check out the blog (https://galaxyproject.org/news/2025-10-21-whycollections/) and video (https://youtu.be/yehY9tR_NX8?si=YH9CZ5KGWm2yVyPA) to see how they can simplify your workflows. You might just find yourself wondering, (1/2)

How do you train the next generation of open-science explorers? With Galaxy, collaboration, and a bit of computational magic. https://training.galaxyproject.org/training-material/news/2025/07/17/gta-overview.html ##UseGalaxy ##GalaxyProject ##EOSC ##GalaxyTraining ##OpenScience ##Bioinformatics (1/2)

My internship experience with assembling genomes and annotating them during a 6 week internship at Freiburg Galaxy. https://galaxyproject.org/news/2025-07-22-ming-li-internship/ ##UseGalaxy ##GalaxyProject ##EOSC ##Bioinformatics ##Genomics ##GenomeAssembly ##GenomeAnnotation ##TrainingProgram (1/2)