Registration is now open! See: csama2026.bioconductor.eu/registration...

🔔 The Bioconductor Developers’ Forum is back! This monthly forum is for developers & users to discuss infrastructure, future tools, and community-driven changes. 🗓 When: Last Thursday of every month ⏰ Time: 4pm GMT First session: Feb 26, 2026 More info: bioconductor.org/developers/d...

Registration now open for CSAMA! 📜 csama2026.bioconductor.eu Highly recommend for learning data science with a scenery, plus a fantastic crowd of students and faculty alike! 📸 from the traditional mid-week hike during last year’s edition.

let's get the community rolling 💪! Thanks to Vilhelm Suksi from @antagomir.bsky.social 's group for the contribution of the notame vignette 🙌

🚀 New release: Metabonaut v1.4.0 is here! 1️⃣ New integration with the notame package for robust feature selection. 2️⃣ Added GNPS2 FBMN export for molecular networking. Explore the updates: rformassspectrometry.github.io/Metabonaut/ #Metabolomics #RStats #OpenScience #MassSpec #Bioconductor

Little over a month left to submit an abstract to #EuroBioC2026 (eurobioc2026.bioconductor.org/pages/submis...), which will be held in Turku, Finland. Here are a couple of Finnish Christmas traditions that you might not know:

This year's CSAMA Biological Data Science Summer School in Brixen takes place 24-29 May 2026. Topics: single-cell and spatial omics, statistics, multi-omics, ML/AI, all very hands-on using R / Bioconductor! More info: csama2026.bioconductor.eu Registration: 1 Feb 2026! @bioconductor.bsky.social

and there will also be lectures and workshops for #MassSpectrometry - based #proteomics and #metabolomics analysis in #rstats with @bioconductor.bsky.social 😎

CSAMA 2026 - Biological Data Science Summer School Bressanone-Brixen, South Tyrol / Italy 24-29 May 2026 csama2026.bioconductor.eu Statistical & computational methods for single cell and spatial omics, with lectures and hands-on exercises in R/Bioconductor.

was a great #computational #metabolomics seminar yesterday in Ghent with @jjjvanderhooft.bsky.social Matthijs Vinck and myself! thanks @lynnvanhaecke.bsky.social for inviting us 🙏

still possible to apply 👇

It's official! The #tidyomics blog is up! 🚀 Here, the introductory post tidyomics.github.io/tidyomicsBlo... This blog aims to publish not only news about our community but also anything related to tidy interfaces, opinions, events, and more. Plz share! 🙏 @bioconductor.bsky.social #rstats

Great work from @philouail.bsky.social 🙌 #xcms now fully integrated into @bioconductor.bsky.social 💪 👉 #metabolomics #MassSpectrometry #rstats

New preprint 📃: doi.org/10.64898/202... 👉 characterization of liver steatosis through blood #metabolomics and #proteomics Great work from Marilyn! and big thanks to all co-authors 🙌

Join EMBL's Interdisciplinary Postdoc Programme! 3 years funding, self-designed interdisciplinary project co-led between EMBL PI and PI in one of EMBL's actual, prospect or associate member states. In particular: AI&Theory, use mathem. models, physics principles and AI www.embl.org/about/info/p...

Representing EuroBioC2026 at the @abacbs.bsky.social Conference this week. The next European @bioconductor.bsky.social Conference will be in Turku, Finland! #ABACBS2025 #EuroBioC2026

🚀 EuroBioC2026 – Call for Abstracts is Now Open! We invite submissions for short talks, posters, and workshops for EuroBioC2026 by Jan 30, 2026. 👉 Submit here: openreview.net/group?id=bio... ⚠️ Note: Register on OpenReview at least two weeks before the abstract deadline to be able to submit.

The Euro Bioc 2026 in Turku is official!

📣 join in my team 🤗! 👇 - #rstats software development - contribute to @bioconductor.bsky.social and @galaxyproject.bsky.social - large-scale #MassSpectrometry #metabolomics and #proteomics data analysis - hiking ⛰️ 📍 Bolzano, 🇮🇹 ⏲️ 3 year position 🔗 full description: bit.ly/4pyXi3V please share

yey! also spotted hackathon co-lead @philouail.bsky.social - I was only virtually attending 😔 - and very likely missed a lot of fun

Happy to announce that also our #SpectriPy package for cross-language #Rstats - #Python #MassSpectrometry data analysis is part of the just released @bioconductor.bsky.social release 3.22 🥳 This was a great collaborative effort! Thanks to all contributors! 💪

🚀 Bioconductor 3.22 is released! Thanks to all developers and community members for contributing to the project! 🔗 Please see the full release announcement here: bioconductor.org/news/bioc_3_...

🧬 EuroBioC2026 is coming to Turku, Finland, from June 3–5, 2026! Expect 3 exciting days with the Bioconductor community, showcasing the latest advances in Bioconductor software and emerging technologies shaping computational biology. 👉 More details soon at eurobioc2026.bioconductor.org

🔬 New in #MassSpectrometry and @jorainer.bsky.social's team! SpectriPy bridges R & Python for data analysis. Breaking language barriers → more flexible & reproducible science. 🚀 🔗bit.ly/48L9yJa #RStats #Python #Bioinformatics #OpenSource

My take: Engineering *is* important. Ideas are cheap. Novelty is overrated. "Hyperparameter tuning" is a cynically dismissive term for something that is in fact the real, difficult problem.

🚀 New on the Bioconductor Blog: GPU Support in Bioconductor Bioconductor is building better support for GPU-accelerated package development for faster and more scalable analysis workflows Learn how package maintainers can leverage this new GPU infrastructure: blog.bioconductor.org/posts/2025-1...

New #HUMAN paper out! 🩸 Our partners from CEMBIO explored blood microsampling (DBS, qDBS, VAMS) for untargeted #lipidomics using high-throughput LC-MS. Volumetric devices show plasma-like precision & recovery! 🔗bit.ly/476qWXw

New #matchms release (0.31)🚀 With functionalities that were on our TODO list for a looooong time: Flash Entropy and BLINK scores! The new "FlashSimilarity" allows computing modified cosine, spectral entropy etc., about 100x faster (or more if you use Linux). #Python #opensource #massspec

Reminder 👇 Interested in improving our R tools for #MassSpectrometry data analysis and integrating them into Galaxy? ⏲️ 3 year position 📍 Bolzano, 🇮🇹 👉 apply if you like: - #rstats SW development - @bioconductor.bsky.social - large-scale #metabolomics data analysis - hiking ⛰️ 🔗 bit.ly/46AMawx

#EuroBioC2025 is over and it has been a blast! Thanks to all participants that came to @prbb.org for contributing to make such an enjoyable event and special thanks to the support from our sponsors, the organizing institutions @upf.edu @isglobal.org and the European @bioconductor.bsky.social Society

EuroBioC2025 is in full swing here in Barcelona! Day 1 was full of great talks, conversations, and that amazing Bioconductor community energy. Excited for what’s ahead today and tomorrow! #EuroBioC2025 #Bioconductor #OpenScience #Community

Was really fun to present our #SpectriPy @bioconductor.bsky.social package for combined #rstats & #Python analysis of #MassSpectrometry data today at #EuroBioC2025 also available on Zenodo: doi.org/10.5281/zeno...

Dream job - research software engineer, in one of the most beautiful parts of the world

@philouail.bsky.social presenting the #Metabonaut tutorials for #metabolomics data analysis at #EuroBioC2025 @bioconductor.bsky.social conference. @human-dn.bsky.social #MassSpectrometry #ProudPI

Interested in integrating our R tools into Galaxy? 👉 apply if you like: - #rstats SW development - contributing to @bioconductor.bsky.social and @galaxyproject.bsky.social - large-scale #metabolomics data analysis - hiking ⛰️ 📍 Bolzano, 🇮🇹 ⏲️ 3 year position 🔗 info and apply: bit.ly/46AMawx

Reminder 📣 still time to apply to the position in my team! - statistical modeling - large scale #metabolomics and #proteomics data - #rstats , #python 📍 Bolzano, ⛰️, 🇮🇹 🔗https://eurac.onboard.org/jobs/Q4301nGV

🌟 Bioconductor 2025 CAB & TAB nominations are open! Join our advisory boards to support community growth or guide technical strategy. 📅 Apply by Aug 31 CAB: forms.gle/8NYxRGhprfuN... TAB: forms.gle/eqef9ThpUypc... #Bioconductor #RStats

Interested in a #PostDoc / researcher position in my team at Eurac Research 🇮🇹? 👉 apply if you like - analyzing large-scale #proteomics and #metabolomics data - #rstats and/or #Python - reproducible research - hiking ⛰️ (on weekends!) 🔗 eurac.onboard.org/jobs/Q4301nGV

Tuomas Borman from @antagomir.bsky.social lab demonstrating why data containers are so useful (book >> loose pages) Online book for microbiome analysis: microbiome.github.io/OMA/docs/dev... #GBCC2025

@jorainer.bsky.social and @philouail.bsky.social gave a great overview of the ecosystem around #RforMassSpectrometry and #XCMS! #MetSoc25 I am super glad they now also provide options to combine with #Python and #matchms (thanks🙏)

Philippine @philouail.bsky.social presenting #xcms , summary of 20 years development and recent extensions at the #MetSoc2025 conference! #ProudPI 😎 #rstats @bioconductor.bsky.social #metabolomics #MassSpectrometry

As mentioned in my talk yesterday at #MetSoc2025,@[email protected] and myself offered a bottle of wine to the winners of #CASMI 2016 contest. Pleased to confirm eventual delivery of a fine Czech Merlot to www.linkedin.com/in/tobias-ki... for winningCategory 3: Full Information.

Hi, in case your phone didn't pick up the QR code to the slides of my Hitch-Hikers Guide to Computational Metabolomics talk this morning at #Metabolomics2025, featuring #xcms, #massbank, not #metfrag but #CASMI and #MetFamily, please find them at doi.org/10.5281/zeno...

Steffen @sneumann.bsky.social on the history and background of @bioconductor.bsky.social during his keynote talk at the #MetSoc2025 conference 😎

📢 @philouail.bsky.social and I will present the #Metabonaut resource of #metabolomics data analysis tutorials at #MetSoc2025 where: BioinfoHub when: 15:00 will be loud during coffee break - so apologies if you can't hear 😔 #MassSpec #rstats @bioconductor.bsky.social

📢 Poster 1001 at #MetSoc2025: Marilyn De Graeve on our #SpectriPy #rstats package to integrate #python and #rstats packages for #MassSpec data analysis . TODAY

🧬 New from the Bioconductor Training Committee: We’re teaming up with @physaliacourses.bsky.social‬ for co-branded training in bioinformatics and computational biology. Details here 👉 blog.bioconductor.org/posts/2025-0...

🆕 The Cohort Profile paper of the Cooperative Health Research In South Tyrol is out on @intjepidemiol.bsky.social 🧵 academic.oup.com/ije/article/...

*Czech* out the presentations by our PIs and DCs during Metabolomics 2025! 😉 Chat with us about all things blood 👀 (or data) over coffee, beer or on the Charles Bridge 🍻 See you all in Prague ❣️ #MetSoc25 #metabolomics

🚀 New in Metabonaut: tested xcms on a 4,000+ sample LC-MS dataset — all on a laptop! 💻 Fully reproducible + now possible thanks to dev improvements in xcms. Vignette: rformassspectrometry.github.io/Metabonaut/a... Big thanks to @jorainer.bsky.social #RStats #MassSpec #OpenScience #Metabonaut