🆕 New publication alert! 🍷 We show how nitrogen supplementation shapes Saccharomyces yeast metabolism, fermentation, and aroma. Strain-dependent effects: inorganic N boosts speed ⚡, organic N enhances key aromas 🌸. 👉 Read more: shorturl.at/cm9A9

The best way to end the visit to the Changins School of Oenology is to have a glass of Chasselat next to the Léman. #LoveSwitzerland Such a great place with wonderfull Science and people.

NEW PUBLICATION OUT ! 🎉 We explored how different temperature programs, including a novel time-varying profile (TVAR), affect fermentation kinetics, metabolite production, and volatile compounds in nine strains of yeast. #wine #yeast iadns.onlinelibrary.wiley.com/doi/full/10....

Vecinos de Alfara del Patriarca detectan seis microorganismos con capacidad antibiótica en su término municipal https://f.mtr.cool/zunznuokfr

Last week my three Masters'student defended their thesis. They did a wonderfull work on genome assemblies, AI for genome annotation and yeast comparative genomics. We have now 3 new brilliant bioinformaricians ! #Proud 😍

Sabies que, durant el teu passeig per la natura, pots contribuir a la ciència? 🌍🔬 Dedica 10-15 minuts del passeig a observar i fotografiar amb calma les espècies que t’envolten 🌿📸 Puja les teves observacions a iNaturalist i col·labora amb el projecte RitmeNatura 👉 ritmenatura.cat/participa

Today my last two Master's student defended their thesis. I had an incredible luck with the three Bioinf I had this year. Three great works about assembly benchmarking, yeast genomics and CNN for genome annotation. Proud tutor mode on. 👨🏻‍🎓👩🏻‍🎓👩🏻‍🎓

Today at 11:00 CEST www.erga-biodiversity.eu/post/faster-...

Today is a science-industry link day. We begin with Amparo Querol introducing the intesive work that we do withcompanies in the @yeastomics.bsky.social lab of the SBYBI group in the @iatacsic.bsky.social.

Having fantastic days of Science with @stelkens.bsky.social and @hittingerlab.bsky.social in the @iatacsic.bsky.social. So inspiring. Great research and better persons ! Thanks to @dperisn.bsky.social @fungialab.bsky.social for organizing it.

🎉 ¡Ya estamos online de nuevo! Gracias por preguntar y por el apoyo estas horas. www.elsaltodiario.com

Typical weird thing that you can't see with Illumina.

Attending to the IV Foro Colabora on Agrobiotechnology organised by Bioval. Creating strong bridges between basic and applied science, academia and industry, is so important. Scientists also need to make impact on our local economy and employment.

📢 Exciting news! We will soon open two PhD positions at @i2sysbio.bsky.social @csic.es, in research projects in collaboration with the @bsc-cns.bsky.social. Both are related to tools to simulate biological tissues. Here’s the description of the open positions. #PhDpositions #PhDOpportunities 👇

Sterol-Targeted Laboratory Evolution Allows the Isolation of Thermotolerant and Respiratory-Competent Clones of the Industrial Yeast Saccharomyces cerevisiae Full text: enviromicro-journals.onlinelibrary.wiley.com/doi/10.1111/... #saccharomyces #yeast #microbiology

Register today for the EMBO course on #genome sequencing, assembly, curation, and downstream analyses meetings.embo.org/event/25-gen...

Part 1 and 2 of the Long-read sequencing Special Issues are now live! tinyurl.com/Genome-Res-LRS

After a couple of months of extraction optimization and tests... We got it ! Fast sequencing and already enough data for the experiment. Thanks @nanoporetech.com Hopefully the genomes will show us something quite surprising. Stay tuned !

Genome sequencing & single-cell transcriptomics continue to produce findings that challenge the idea that #cancer is purely a genetic disease. This Essay delves into #omics data that questions the somatic mutation theory & presents alternative theories based on GRNs & tissue fields.🧪 plos.io/3DRtAEW

1. A Thread about #kveik #yeast and our student science project in the frames of our General and Applied Microbiology Practice class at UDebrecen w/ BSc students :) #openscience We just started this project that focuses on #bacteria in kveik yeast starters. The plan is to compare their phenotypes..

📣Our latest study "An Integrated Multiphase Dynamic Genome-Scale Model Explains Batch Fermentations Led by Saccharomyces Species", is out in mSystems! 📖 DOI:10.1128/msystems.01615-24 Great collaboration with @iatacsic.bsky.social #Fermentation #SystemsBiology #Yeast #MetabolicModeling #Biotech

El próximo día 12 de marzo, seminario especial en honor a Margaret Dayhoff en el @iatacsic.bsky.social por Irene Otero-Muras. Nos vemos ! @bcbhubcsic.bsky.social

Our newest research in @nature.com We built a robot (!) to track plant-fungal trade networks. By following half a million fungal highways & nutrient flows within them, we discovered how plants & fungi build hyper-efficient supply chains www.nature.com/articles/s41... 📹 @sasaspacal.bsky.social

Post-doc opening to join our lab @ebi.embl.org to develop&apply #bioinformatics and #machine-learning methods to study intra-/extra cellular networks to extract disease mechanisms from #single-cell and #spatial multiomic data - please share 🙏 : embl.wd103.myworkdayjobs.com/EMBL/job/Hin...

🌳 Forests are vital for biodiversity and food security, and a focus for our work at EPPO. 📸 @fao.org are running the 2025 International Day of Forests photography competition. 👉 Find out more and submit your photos before the 12th March deadline: https://buff.ly/3Etu83L

Great initiative from @bcbhubcsic.bsky.social @amrojasm.bsky.social For #11F youtu.be/RqeqHk2V7Kw

Conoce toda la actualidad y la agenda semanal de los centros del @csic.es en la Comunitat Valenciana en nuestro boletín #SemanaCSIC: delegacion.comunitatvalenciana.csic.es/wp-content/u... @iatacsic.bsky.social @i2sysbio.bsky.social @itq-upvcsic.bsky.social @ibmcp.bsky.social @neuroalc.bsky.social

Deadline this week www.sib.swiss/bioinformati...

Join us at the Gordon Research Seminar (GRS) on Ecological and Evolutionary Genomics in Tuscany, co-chaired by @jcbnunez.bsky.social and me. If you’d like to present your research and be considered for a talk, make sure to submit your application before April 6th!

PAPER ALERT ! Very happy that this interesting work is out. It has been a (VERY) long process but finally here it is ! We have worked with real baker yeasts which means very complex genome evolution is observed and opens lots of new paths of work. doi.org/10.1111/1751...

Very happy to share a new paper, just out in New Phytologist: Concurrent common fungal networks formed by different guilds of fungi Open access 🧪 @newphyt.bsky.social nph.onlinelibrary.wiley.com/doi/10.1111/...

What DNA variants alter transcription factor (TF) binding affinity? Here, we describe a new workflow baal-nf. We used it to trawl through 6017 ChIP-Seq data sets for 558 TFs and 46 genotyped cell lines, finding 298,783 allele-specific binding sites (ASBs). www.biorxiv.org/content/10.1... 1/2

Latest work from super star postdoc @helsenjana.bsky.social in @gautamdey.bsky.social and my labs. I should note that the project was entirely Jana's idea. Jana is currently on the job market - she is amazing and if she applies to your institution, I highly recommend you invite her for interview.

Great week for the YeastOmics lab with TWO PhD hurra ! Congrats to Alba Contreras and Sonia Albillos !

📣 Buenas tardes a tod@s, nos hemos mudado desde el sitio oscuro. A partir de ahora todas las comunicaciones pertinentes a la conexión se realizarán por esta plataforma. Somos legión. Para más información: conexion-bcb.csic.es

Very useful collection of biodiversity genomics tutorials by @ergabiodiv.bsky.social knowledge.erga-biodiversity.eu

Ten Simple Rules for Making Good Oral Presentations Open Access journals.plos.org/ploscompbiol...

A white Christmas ! Hug for all from Switzerland.

I write a bunch of content along these lines. Please consider subscribing for free :) open.substack.com/pub/genomely

"Why do you use yeast as your model ?" 😉😉 All the best for Christmas and new Year from YeastOmics lab 😘🤶🧑‍🎄🎅☃️🍾🍷🥂🍇 yeastomics.csic.es

I’m looking for #bioinformatics #compbio #postdoc candidates to apply for a #JdlC postdoc fellowship. If your background involves metagenomics and/or transcriptomics and you’re eligible please contact ASAP! www.aei.gob.es/convocatoria...

Are you interested in genome annotations? Do you want to work in Valencia, Spain. We have an open position at @IBMCP . Please contact me if you are interested or forward to who may you think that could be interested.

Earlier this year, I received news that fake peer reviews were allegedly being submitted impersonating me and approximately six others I shared my story with Science to, hopefully, reduce the chance of this kind of breach happening again www.science.org/content/arti...

"Non-White scientists appear on fewer editorial boards, spend more time under review, and receive fewer citations" www.pnas.org/doi/abs/10.1...

Today we had the chance to enjoy an inspiring workshop on Cell Factories at the @iatacsic.bsky.social @csic.es in the context of our Severo Ochoa Program Workshop series.

Wow - bluesky! 📈 🦠 Please help me amplify a special faculty search. We're looking for someone in "Microbial Systems Biology" to join me and @kreynoldslab.bsky.social at UTSW Sys Bio / Bioinformatics. There is an empty lab space right next to us waiting for you! apply.interfolio.com/154339 1/4

Christmas arrived early this year !!! 🍾🍾 Let's the fun begin !!! ❤️ A lot of yeast genomics and metagenomics to come in the next months at IATA @csic.es @iatacsic.bsky.social Stay tuned 🧬🖥️ Thanks @oxfordnanopore.bsky.social