We’re looking for a Bioinformatician to join our talented team! If you’re passionate about making bioimaging data FAIR, we’d love to hear from you. Apply before November 23rd! embl.wd103.myworkdayjobs.com/en-US/EMBL/j...

🔬 We’re also releasing a massive new dataset — over 600,000 annotated nucleus images — now freely available on the BioImage Archive. www.ebi.ac.uk/biostudies/b...

All of the segmentation and morphometric analysis was done with the open-source platform QuPath. The scripts I wrote are on Github and the raw images are on the BioImage Archive, because open-source is the way to go! But seriously, look at these cells! They are so angry.

We recently had the pleasure of chatting about the newly published MIFA guidelines, which aim to improve how we share AI-ready datasets for bioimage analysis. Huge thanks to Joshua Talks and @rodrigofg.bsky.social for sharing the user perspective — check out the interview below!

Halfway to I2K is BACK, friends of all kinds! Last year, 650 people attended 30+ TOTALLY FREE image analysis workshops of all kinds, across many timezones. If you make image analysis software and want to teach it, workshop submissions are open now! We'd love to have your tool highlighted.

🎉 Our paper “MIFA: Metadata, Incentives, Formats and Accessibility guidelines to improve the reuse of AI datasets for bioimage analysis” is out in @natmethods.nature.com! Community-driven standards to make bioimage data AI-ready & reusable. 👉 www.nature.com/articles/s41... #AI #Bioimaging #FAIRdata

'Microscopy data analysis: machine learning and the BioImage Archive' is back. Join teams from across @ebi.embl.org to analyse your microscopy data using the latest machine learning and image analysis techniques. Virtual course, UK time zone | 16 – 20 March 2026 www.ebi.ac.uk/training/eve... 🧬🔬

Honoured to be featured - and even prouder of what the @bioimagearchive.bsky.social team is building together for the life sciences community.

Our group @ebi.embl.org‬ is a host for the ARISE2 MSCA-funded post-doc fellowship, in collab with @bioimagearchive.bsky.social‬ and ‪@scilifelab.se (esp. A Mezger and S. Giacomello) to support the development of next-gen spatial data infrastructures. Apply by 30/09 www.embl.org/training/ari...

We are at #mmc2025! Come to our booth to say hi and learn about the Data Steward Training Program 👋

Ever wished your AI model could test itself before you download it? Now it can. AI4Life has a new model evaluation platform that connects models from the BioImage Model Zoo to real data in the @bioimagearchive.bsky.social. Details here 👉 ai4life.eurobioimaging.eu/the-ai4life-...

📣 We are pleased that @natureportfolio.nature.com recommends The BioImage Archive for depositing bioimaging data, as part of their cross-journal microscopy reporting pilot. www.nature.com/articles/s41... Here is to improving transparency and reproducibility in light and fluorescence microscopy 🔬!

Join our #webinar next week to learn about FAIR data, with a focus on EMBL-EBI resources Biosamples and @bioimagearchive.bsky.social! Registration is free but essential trainingcontent.embl.org/open-fair-da... #datamanagement #FAIRdata #opendata #lifescience @embl.org @ebi.embl.org #PlanetaryBiology

We will be speaking on Wednesday as part of the University of Vienna Open Science and Research Data Management Seminar Series! Join us if you want to learn about what you can expect from the BioImage Archive and the PANGAEA repository for Earth Sciences.

💡Success stories from AI4Life: From the BioImage.IO models to @bioimagearchive.bsky.social’s AI-ready datasets, and community resources like the Helpdesk, Open Calls, and Challenges — see how it all connects in one ecosystem!

It's not something we had in mind when assembling this data with @rebannjones.bsky.social, but it's very gratifying and flattering to see our zebrafish embryo images and annotations feature at the top of the AI Ready list presented by @bioimagearchive.bsky.social www.ebi.ac.uk/bioimage-arc...

📊 What does AI-ready data actually look like? Time to find out! Head over to @bioimagearchive.bsky.social’s gallery — it’s like an art museum for high-quality training data and metadata. Perfect for your next model! www.ebi.ac.uk/bioimage-arc...

Did you know that Bioimage Archive has a specific database for people to share AI-ready imaging datasets? I did not until @yanlanmao.bsky.social told me! Please deposit! If people regularly submitted, it would have a huge collective impact on bioimage analysis. www.ebi.ac.uk/bioimage-arc...

Outstanding work by @kenzoivanovitch.bsky.social and colleagues. And you can explore this beautiful dataset at the BIA! www.ebi.ac.uk/biostudies/b...

We’re excited to share the amazing science our microscopes are enabling🔬 From #3Dimaging technologies to developmental biology, cancer research, spatial-omics and more!🧬🧠 Follow us for cutting-edge discoveries at @embl.org @prbb.org and discover how #mesoscopic imaging can support your research

This week we've been joined by participants learning more about bioimaging and analysing microscopy data. Thank you to @bioimagearchive.bsky.social and Image Data Resource for your support! Want to join us for this course next year? Register your interest: www.ebi.ac.uk/training/eve... 🧪🧬🖥️🔬

🎤 AI4Life continues its presence at the @bioimagearchive.bsky.social course! Esti presents BioImage.IO, emphasizing the importance of keeping AI models accessible, reproducible, and interoperable. With so many image analysis tools out there, common model standards are the way forward!

At the @training.ebi.embl.org course on Microscopy Data Analysis: Machine Learning & @bioimagearchive.bsky.social, Dominik Kutra from @ilastik-team.bsky.social introduced ilastik and how it supports image analysis. Now, it's time for a hands-on session! 🚀 #BioImageAnalysis #MachineLearning

What a wonderful week! The #EuroBioImaging All Hands Meeting is the occasion to connect with colleagues from around Europe to exchange on topics ranging from imaging technology innovation, data, training, international collaboration & more. Thanks for attending online & in person! 🤗 📸 EMBL/PhotoLab

Today we had two fantastic key note talks at #TiM2025. Matthew Hartley enlightened us about #DataSharing through @bioimagearchive.bsky.social 🔬➡️🧑‍🔬 Mayeul Collot invited us into the world of photo-convertable dyes for #highresolutionimaging! 🔴➡️🟢 Many thanks to our amazing speakers!

Kudos to Matthew Hartley of the @bioimagearchive.bsky.social for his message of global collaboration in the #bioimaging community @ #TiM2025 👏👏👏

Big news for AI4Life! Our project is a success story by the European Commission! 🇪🇺 The Directorate-General for Research and Innovation (DG RTD) highlights our mission of making AI-powered bioimage analysis accessible to researchers everywhere 🌍 Read more: ai4life.eurobioimaging.eu/ai4life-high...

We are excited to announce the second virtual BioImage Archive User Forum. Join us to learn about our latest developments and future plans (including our brand new website!). 10th March 2025 at 9:00-10:30 UTC or 14:00-15:30 UTC  Register: forms.gle/MFmCWfPm9Upn... Agenda: tinyurl.com/biaagenda

Repositories are essential for #FAIR data. Our invited speakers Frances Wong from @openmicroscopy.org #IDR & Aybüke Yoldaş from @bioimagearchive.bsky.social present recent developments at @nfdi4bioimage.bsky.social All-Hands Meeting. We're excited to extend our collaborations ➡️FAIR #bioimaging #NFDI

🚨 Save the Date! 🚨 AI4Life & @globias.bsky.social are hosting a 4-part webinar series to showcase AI4Life services and lessons learned. 📅 When: Feb 13, Apr 10, Jun 12, Aug 14 🖥️ How: Online | 🎥 Recorded 🔗 Registration: bit.ly/registration...

I’m so excited to share my new website with you all! 🎉 Check it out at falk-illustrations.de, explore my artwork, and feel free to reach out if you're interested in commissions or just want to chat! #SciArt #Illustration #NewWebsite #Cartoons #Excited #AndABitProud

Exciting update!! @bioimagearchive.bsky.social is now hosting the first publicly available Incucyte data! If you have live-cell imaging data, please consider uploading to this amazing repository!! Thanks to Julia Carnevale and Alex Marson for experimental data — www.ebi.ac.uk/biostudies/b...

Join our wonderful team at EMBL-EBI! We are hiring a data steward with #microscopy experience. You will get to collaborate with scientists and provide training to address the imaging community needs in data management #BioImaging #DataSteward www.embl.org/jobs/positio...

We love working with scientists that are so excited to share their data. Looking forward to having these images available at the BIA soon!

We finally made it to BlueSky and we can’t wait to engage with the #Bioimaging community here! We are @ebi.embl.org data resource for biological images, so follow us for updates on our latest developments, and of course for mesmerising images.