HRMEM
@hrmem.bsky.social
📤 528
📥 89
📝 23
Facility for high resolution macromolecular cryo-EM. Located @UBC . Keeping it 100K.
More structural biology! From the
@jburkevic.bsky.social
lab with work from
@sushantsuresh.bsky.social
and
@alexlouiseshaw.bsky.social
- featuring data collected in our facility!
#cryoEM
www.jbc.org/article/S002...
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Development of an inhibitory TTC7B selective nanobody that blocks EFR3 recruitment of PI4KA
Phosphatidylinositol 4 kinase IIIα (PI4KIIIα/PI4KA) is an essential lipid kinase that plays a critical role in regulating plasma membrane identity. PI4KA is primarily recruited to the plasma membrane ...
https://www.jbc.org/article/S0021-9258(25)02738-3/fulltext
4 days ago
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reposted by
HRMEM
Sushant Suresh
25 days ago
Final part of my PhD work is now out! We were able to develop a nanobody that inhibits EFR3 mediated PI4KA membrane recruitment. Potential therapeutic idea? Amazing collaboration with different labs using a host of different techniques.
@alexlouiseshaw.bsky.social
add a skeleton here at some point
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reposted by
HRMEM
Alexandria Shaw
4 months ago
New preprint from the lab headed up by
@sushantsuresh.bsky.social
! Late last year, we published the molecular basis of PI4KA plasma membrane recruitment by EFR3 (PMID:39705356). This work builds on these findings and identifies a new potential therapeutic avenue! Check it out!
add a skeleton here at some point
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reposted by
HRMEM
John Burke
26 days ago
Cool new paper (
www.jbc.org/article/S002...
from my lab spearheaded by graduate students Sushant
@sushantsuresh.bsky.social
and Alex
@alexlouiseshaw.bsky.social
. This was a very cool collaboration with the Scott Hansen, Jennifer Cobb, Tamas Balla labs
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https://www.jbc.org/article/S0021-9258(25)02738-3/fulltextfrom
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reposted by
HRMEM
Filip Van Petegem
5 days ago
Thanks to the UBC media team for coverage of our statin : RyR1 work. Atorvastatins bind and trigger opening of a calcium release channel critical for muscle contraction.
news.ubc.ca/2025/11/ubc-...
@ubcmedicine.bsky.social
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UBC researchers uncover how statins harm muscles—and how to stop it - UBC News
Study reveals how cholesterol-lowering drugs can trigger muscle damage—and point to a way to make them safer.
https://news.ubc.ca/2025/11/ubc-statins-muscles-research/
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Congratulations to
@filipvanpetegem.bsky.social
on their latest paper- with a structure of ryanadine receptor bound to statins!
#cryoEM
www.nature.com/articles/s41...
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Cryo-electron microscopy reveals sequential binding and activation of Ryanodine Receptors by statin triplets - Nature Communications
Statins lower blood plasma cholesterol but can cause muscle-related issues including life-threatening rhabdomyolysis. Here the authors show that atorvastatin binds as triplets to the skeletal muscle R...
https://www.nature.com/articles/s41467-025-66522-0#Abs1
4 days ago
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reposted by
HRMEM
Filip Van Petegem
10 days ago
Our latest work : Statins are used to lower plasma cholesterol but often come with muscle-related side effects. Using cryo-EM, we show how multiple statin molecules cooperate to bind RyR1, a calcium release channel mainly found in skeletal muscle.
nature.com/articles/s41...
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Check out this paper, for which we collected data for Rashmi Panigrahi and the Glover lab at UAlberta! We needed a tilted collection to get the side views of these nucleosomes, and it was a lot of fun working with our colleagues from another province!
pubmed.ncbi.nlm.nih.gov/41123210/
#cryoEM
❄️🔬🇨🇦
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Structural insights into γH2Ax containing nucleosomes - PubMed
The phosphorylation of the histone variant H2AX on the nucleosome, yielding γH2AX, acts as a 'master control switch', signaling the recruitment of DNA repair factors at DNA double-stranded break sites. This phosphorylation is recognized by BRCA1 carboxy-terminal (BRCT) domains of specific repair pro …
https://pubmed.ncbi.nlm.nih.gov/41123210/
about 1 month ago
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We are excited to share the recent paper from
@filipvanpetegem.bsky.social
featuring cryo-EM structures of the KCNQ1 potassium channel collected at HRMEM!
#cryoEM
#structuralbiology
www.nature.com/articles/s41..
.
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https://www.nature.com/articles/s41..
about 2 months ago
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reposted by
HRMEM
Filip Van Petegem
about 2 months ago
Our cryo-EM structure of the intermediate state of the KCNQ1 potassium channel is out. Collaborative effort with the David Fedida and Luca Maragliano labs. Cryo-EM work spearheaded by Efthimios Kyriakis, PhD
www.nature.com/articles/s41...
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HRMEM is excited to share this new paper from the Cullis lab! Congrats to Miffy Cheng et al!
www.nature.com/articles/s41...
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Liposomal lipid nanoparticles for extrahepatic delivery of mRNA - Nature Communications
Long-circulating, transfection-competent LNP-mRNA systems are key for effective extrahepatic delivery. Here, authors show that LNPs with high bilayer lipid ratios yield high mRNA encapsulation, prolon...
https://www.nature.com/articles/s41467-025-58523-w
5 months ago
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HRMEM is excited to spotlight this excellent review of cell envelope diversity and evolution from HRMEM cryoET user Eltiza Tocheva (
@elitzatocheva.bsky.social
) and team.
www.nature.com/articles/s41...
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Cell envelope diversity and evolution across the bacterial tree of life - Nature Microbiology
This Review discusses the diversity of cell envelope architectures across major bacterial phyla and highlights conserved features found in diderm lineages.
https://www.nature.com/articles/s41564-024-01812-9
5 months ago
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HRMEM is happy to spotlight this exciting work, which applied a magnetic separation technique to characterize LNP bimolecular coronas. Congratulations to Valentina Francia, Yao Zhang and colleagues from the Cullis lab at UBC. We are proud to have supported this work! 🔬
doi.org/10.1073/pnas...
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A magnetic separation method for isolating and characterizing the biomolecular corona of lipid nanoparticles | PNAS
Lipid nanoparticle (LNP) formulations are a proven method for the delivery of nucleic acids for gene therapy as exemplified by the worldwide rollou...
https://www.pnas.org/doi/10.1073/pnas.2307803120
6 months ago
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reposted by
HRMEM
SBGrid Consortium
6 months ago
In case you missed our May webinar, it is now available!! Ellen Zhong from Princeton University presented CryoDRGN-AI. Topic: CryoDRGN-AI: Neural ab initio reconstruction of challenging cryo-EM and cryo-ET datasets Host: Pete Meyer Recorded on: May 20, 2025
buff.ly/jKjWTOa
#SBGridWebinars
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CryoDRGN
SBGrid webinars are hosted with partial support from the NIH R25 Continuing Education for Structural Biology Mentors #GM151273, in collaboration with Co-PI J...
https://youtu.be/P9c1dUO3-Hg
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HRMEM is proud to spotlight this structure of the cardiac potassium channel, KCNQ1, bound to its activator, ML277! Shout to Katrien Willegems, Jodene Eldstrom, Efthimios Kyriakis, Fariba Ataei and researchers from the Fedida and Van Petegem Labs at UBC! 🔬🫀🧬
#cryoEM
www.nature.com/articles/s41...
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Structural and electrophysiological basis for the modulation of KCNQ1 channel currents by ML277 - Nature Communications
KCNQ1 channels are active in heart, brain and gut. Functional loss causes epilepsy and sudden arrhythmic death. Here, authors describe a key activator drug binding site, explaining isoform and drug se...
https://www.nature.com/articles/s41467-022-31526-7
6 months ago
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HRMEM is happy to spotlight this structure of calcineurin bound to PI4KA determined by Alexandria Shaw and colleagues from the Burke Lab at the University of Victoria and the Yip Lab at UBC! We are proud to have provided the electron microscopy for this work! Read more:
doi.org/10.1016/j.st...
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Structure of calcineurin bound to PI4KA reveals dual interface in both PI4KA and FAM126A
Phosphatidylinositol 4-kinase alpha (PI4KA) maintains the phosphatidylinositol 4-phosphate (PI4P) and phosphatidylserine pools of the plasma membrane.…
https://www.sciencedirect.com/science/article/pii/S0969212624003241
7 months ago
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reposted by
HRMEM
Morgridge Institute for Research
7 months ago
Mass Spec + lasers + cryoEM = COOL SCIENCE! New research from
@coonlab.bsky.social
and the Grant Lab combines mass spec to land proteins on TEM grids, a laser to restore protein structure, and cryoEM imaging and analysis to produce 3D reconstructions.
www.mcponline.org/article/S153...
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Laser-Induced Rehydration of Cryo-Landed Proteins Restores Native Structure
The use of native mass spectrometry (MS) to land biological molecules for subsequent cryogenic electron microscopy (cryoEM) imaging and three-dimensional reconstruction has gained momentum in recent y...
https://www.mcponline.org/article/S1535-9476(25)00085-4/fulltext
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reposted by
HRMEM
Philippe Van der Stappen
7 months ago
Hey
#TeamTomo
, Ever been in need of a tutorial about the fundamentals of cryo-electron tomography? From preprocessing raw frames to high-res subtomogram averaging? That's why
@florentwaltz.bsky.social
and I made this website!
tomoguide.github.io
Follow the thread 1 /🧵
#CryoET
#CryoEM
🔬🧪
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Welcome to TomoGuide
A step-by-step Cryo-ET guide
https://tomoguide.github.io/
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We are happy to spotlight these structures of human ABCA4, a crucial transporter for ocular function, determined by Jéssica Fernandes Scortecci and colleagues from the Molday and Van Petegem Labs at UBC! 🔬 We are happy to have supported this work!
#cryoEM
Read more:
www.nature.com/articles/s41...
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Cryo-EM structures of the ABCA4 importer reveal mechanisms underlying substrate binding and Stargardt disease - Nature Communications
ABCA4 is an ATP-binding cassette (ABC) transporter that flips N-retinylidenephosphatidylethanolamine (N-Ret-PE) to the cytoplasmic leaflet of photoreceptor membranes. ABCA4 mutations are associated wi...
https://www.nature.com/articles/s41467-021-26161-7
7 months ago
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Cryo-ET of Thermotoga maritima in a study led by Danielle Sexton and colleagues from the Tocheva Lab at UBC broadened our understanding of outer membrane biogenesis! Shout out to
@elitzatocheva.bsky.social
! Read more about this awesome work supported by HRMEM here:
www.pnas.org/doi/10.1073/...
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The cell envelope of Thermotogae suggests a mechanism for outer membrane biogenesis | PNAS
The presence of a cell membrane is one of the major structural components defining life. Recent phylogenomic analyses have supported the hypothesis...
https://www.pnas.org/doi/10.1073/pnas.2303275120#executive-summary-abstract
7 months ago
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reposted by
HRMEM
Danielle Grotjahn
7 months ago
🚨New preprint!🚨
#teamtomo
We expanded Surface Morphometrics to quantify membrane thickness from cryo-ET—revealing local variation across organelles. Led by the lab’s first grad student,
@mmedina300kv.bsky.social
(defending Monday! 🍾) w/
@attychang.bsky.social
@hamid13r.bsky.social
&
@tomo.science
add a skeleton here at some point
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Bin Zhao and colleagues from the Cullis Lab at UBC have developed a technique to determine the pH inside LNPs using a pH-sensitive fluorescent dye-based DNA probe. 🧬🔬 HRMEM is happy to have supported the electron microscopy for this exciting research! Read more :
doi.org/10.1016/j.bi...
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Determination of the interior pH of lipid nanoparticles using a pH-sensitive fluorescent dye-based DNA probe
Lipid nanoparticles (LNPs) containing ionizable cationic lipids are proven delivery systems for therapeutic nucleic acids, such as small interfering R…
https://www.sciencedirect.com/science/article/abs/pii/S095656632400068X?via%3Dihub
7 months ago
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reposted by
HRMEM
Berkeley Lab Press
7 months ago
"Not only will it provide sharper details of proteins and other molecules imaged with cryo-EM," says
@berkeleylab.lbl.gov
's Peter Denes, "but it should enable microscopists to image even proteins roughly half the size of what is currently possible."
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Ultracool microscopy yields a sharper look at proteins
After years of frustration, researchers learn how to sharpen molecular images with liquid helium
https://www.science.org/content/article/ultracool-microscopy-yields-sharper-look-proteins
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We are excited to spotlight this structure of the type 3 ryanodine receptor determined by Yu Seby Chen and colleagues from UBC and the University of Siena! It was a pleasure to collaborate with the Van Petegem (
@filipvanpetegem.bsky.social
) Lab on this lovely work!
www.nature.com/articles/s41...
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Cryo-EM investigation of ryanodine receptor type 3 - Nature Communications
Ryanodine Receptor type 3 mediates ER Ca2+ release in different cell types. Here, the authors use cryo-EM to reveal a binding site for chloride and two distinct sites for ATP. Epileptic encephalopathy...
https://www.nature.com/articles/s41467-024-52998-9
7 months ago
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HRMEM is happy to have supported this structure determination of Rab3GAP by Gage Fairlie, Kha Nguyen and colleagues. Congratulations to the Burke Lab (
@jburkevic.bsky.social
)at the University of Victoria and the Yip Lab at UBC! 🔬🎉 Read more here:
www.nature.com/articles/s41...
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Biochemical and structural characterization of Rab3GAP reveals insights into Rab18 nucleotide exchange activity - Nature Communications
Rab3GAP, a guanine nucleotide exchange factor for Rab18, regulates membrane trafficking and lipid droplet metabolism. The authors elucidated its molecular structure, mapped its potential substrate bin...
https://www.nature.com/articles/s41467-025-55828-8
8 months ago
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Congratulations to Franco Li, Shaun Peters and colleagues from the Strynadka Lab at UBC for their recent publication showcasing cryo-EM structures of S. aureus TarGH in the presence of targocil-II! HRMEM is proud to have supported this work! 🔬🫶
www.nature.com/articles/s41...
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Cryo-EM analyses unveil details of mechanism and targocil-II mediated inhibition of S. aureus WTA transporter TarGH - Nature Communications
Cryo-EM illuminates atomic binding details and far-ranging conformational effects of the inhibitor targocil-II on wall teichoic acid ABC transporter TarGH, a virulence target from the antibiotic resis...
https://www.nature.com/articles/s41467-025-58202-w
8 months ago
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People always ask me what resolution they need and I say...depends on the question you're asking. This is a really cool example of that extra resolution being meaningful!
add a skeleton here at some point
9 months ago
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reposted by
HRMEM
John Rubinstein
9 months ago
In
@justinditrani.bsky.social
final postdoc paper (with contributions from many others) we show that forming/purifying vesicles (here from M. smegmatis) allows structure det'n of *endogenous* membrane proteins in their *native lipid bilayer* 🧵 on methods & TB biology...
www.pnas.org/doi/full/10....
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Millin' like a villain
about 1 year ago
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Bringing together tardigrades and
#CryoEM
, I love it! ❤️
www.biorxiv.org/content/10.1...
🧪
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Small LEA proteins as an effective air-water interface protectant for fragile samples during cryo-EM grid plunge freezing
bioRxiv - the preprint server for biology, operated by Cold Spring Harbor Laboratory, a research and educational institution
https://www.biorxiv.org/content/10.1101/2024.02.06.579238v1
almost 2 years ago
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OK this is COOL i love it
www.biorxiv.org/content/10.1...
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Cryo-EM analysis on magnetic beads for scarce macromolecules in heterogeneous samples
bioRxiv - the preprint server for biology, operated by Cold Spring Harbor Laboratory, a research and educational institution
https://www.biorxiv.org/content/10.1101/2024.01.21.576499v1.full.pdf+html
almost 2 years ago
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reposted by
HRMEM
Filip Van Petegem
almost 2 years ago
A very cool method by Bonnie Murphy's lab to map elements for cryo-EM. The method, named REEL-EM, makes use of electron-energy loss spectroscopy. Honored to have contributed to this:
www.biorxiv.org/content/10.1...
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