Kaiser Lab
@kaiserlab.bsky.social
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We advance RNA modification mass spectrometry. More information at
https://kaiser-lab.de
reposted by
Kaiser Lab
RNA Society Journal
27 days ago
Spatiotemporal NAIL-MS analysis shows that ALKBH5 does not affect global m6A turnover in human mRNA across subcellular compartments under standard growth conditions
bit.ly/4lvVtC6
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We’re moving in! Posters are going up, coffee is being ordered, and the countdown is real. Final prep before minds meet in Frankfurt. 2 days until we start
#ConferenceVibes
#RNAmods
#HRP2025
about 2 months ago
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The conference print materials have arrived — and so has the excitement! 🧭 Our goal? To build the foundation for reproducible RNA mass spectrometry, where labs worldwide can trust and compare results.
#HRP2025
#RNAstandards
#SciModom
about 2 months ago
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In only 4 days, we’re combining theory and practice: the training module of HRP 2025 covers protocols, tools, and expert insights — from digestion to data analysis. Perfect for anyone entering the field or refreshing their skills. Hashtag#RNAtraining Hashtag#MassSpec Hashtag#HRP2025
about 2 months ago
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Three instruments, one goal: the Kaiser Lab Agilent setup is now ready to contribute to our harmonization mission. Side by side with Thermo and Bruker, this is harmonization in action.
#Agilent
#HRP2025
#LCMS
5 days left!
about 2 months ago
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6 days to go! Precision incoming: The Bruker instrument is now in set-up and ready for action! Thanks for everyone who made this possible! Can three platforms agree on what modified RNA looks like? Follow us and find out.
#Bruker
#LCMSMS
#RNAmodification
#HRP2025
(picture by Dirk Wunderlich)
about 2 months ago
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Behind every workshop, there’s serious logistics: last week we welcomed the Thermo system that will power part of our experimental module. Big thanks to everyone who made this happen!
#MassSpec
#ThermoFisher
#RNAanalytics
#HRP2025
about 2 months ago
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Our experimental module is the heart of the workshop: 3 platforms, 1 benchmark dataset, and a clear mission — harmonize how we measure modified RNA. Get ready to generate data that shapes the future.
#Benchmarking
#HRP2025
#RNAmods
about 2 months ago
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only 9 days left until the HRP Workshop 2025! Here’s a first look at our talks and breakout sessions: the program reflects the full diversity of the RNA modification field. Designed for discussion, connection, and community progress.
#HRP2025
#OpenScience
#Epitranscriptome
#RNA
about 2 months ago
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Kaiser Lab
Elisabeth Bik - Perpetrator 5, a fraudulent microbiologist
2 months ago
This new preprint was designed so poorly that it provides absolutely no proof that mRNA vaccines caused cancer/other diseases. It compared 10 (!) handpicked sick patients to 803 healthy patients. And behold, they show different RNA expression profiles. Because they were sick. Link in alt.
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1st Workshop of the Human RNome Project - Scientific Revolution Begins in Frankfurt!
#HRP2025
@goetheuni.bsky.social
10 days to go!
2 months ago
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Kaiser Lab
Alper Akay
4 months ago
Another great RNA modification-mass spec paper from
@kaiserlab.bsky.social
which we were very happy to contribute!
@biouea.bsky.social
@norwichrnaclub.bsky.social
www.sciencedirect.com/science/arti...
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NAIL-MS Elucidates Crucial tRNA U34 Modifications in Response to Heat Stress across Eukaryotes and Prokaryotes
Global warming leads to rising temperatures, necessitating organismal adaptation at the cellular level. One potential mechanism for maintaining proteo…
https://www.sciencedirect.com/science/article/pii/S0022283625002943
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reposted by
Kaiser Lab
Janusz M. Bujnicki
4 months ago
Join us in Frankfurt, Aug 4–9, for the 2025 Human RNome Project Workshop! Focus: RNA modifications, mass spec, direct RNA seq & more. Help shape the roadmap to decode the human RNome. 🔗
humanrnomeproject.org/2025-workshop-in-germany
#RNA
#HumanRNomeProject
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Human RNome Project
Our mission is to advance RNA science to impact human health, food security and boost biomanufacturing.
https://humanrnomeproject.org/2025-workshop-in-germany
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Kaiser Lab
SCALE - SubCellular Architecture of LifE
4 months ago
🎉 We’re absolutely thrilled: SCALE has been selected as a DFG Excellence Cluster! A huge thank you to our incredible team—this would not have been possible without your dedication and talent. 🙌
@dfg.de
#ClustersOfExcellence
#SCALEcluster
🧵
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Kaiser Lab
Deutsche Forschungsgemeinschaft
4 months ago
Die
#Exzellenzcluster
stehen fest: Heute hat die Exzellenzkommission 70 Projekte zur Förderung ausgewählt. 45 Cluster werden fortgesetzt, 25 neu eingerichtet. Die Förderung beginnt ab 1. Jan. 2026 für 7 Jahre, die Fördersumme beträgt insg. 539 Mio. €/Jahr. Die Liste:
www.dfg.de/resource/blo...
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Kaiser Lab
Chantal Scheepbouwer
5 months ago
What better way to start things off than with a throwback to our ALL-tRNAseq paper?!
genesdev.cshlp.org/content/37/5...
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ALL-tRNAseq enables robust tRNA profiling in tissue samples
A biweekly scientific journal publishing high-quality research in molecular biology and genetics, cancer biology, biochemistry, and related fields
http://genesdev.cshlp.org/content/37/5-6/243.long
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Kaiser Lab
Ute Hellmich
5 months ago
You thought Glu/Asp don't like RNA or DNA? Maybe you even introduced them into your protein to stop such interactions? 😱🧪 Think again! New paper
@angewandtechemie.bsky.social
with Wöhnert lab shows structural context matters for phosphodiester interactions!
onlinelibrary.wiley.com/doi/10.1002/...
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Protonated Glutamate and Aspartate Side Chains Can Recognize Phosphodiester Groups via Strong and Short Hydrogen Bonds in Biomacromolecular Complexes
Phosphodiester groups occur ubiquitously in nature, e.g. in nucleic acids or in cyclic (di-)nucleotides important for signal transduction. Proteins often use polar or positively charged amino acids t...
https://onlinelibrary.wiley.com/doi/10.1002/anie.202501589
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Kaiser Lab
Carolyn Bertozzi
5 months ago
Thank you
#MIT
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Kaiser Lab
Valérie Gabelica
5 months ago
Postdoc position mass spectrometry/ chemical proteomics in Geneva, Switzerland 🇨🇭 with my colleague Sascha. Deadline is coming soon ⤵️
add a skeleton here at some point
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Kaiser Lab
Eva Kowalinski
5 months ago
Are you a postdoc ready for transition to an independent position? You connect infection biology with cutting-edge structural biology or multimodal imaging? Are you aware of such a colleague? I am seeking speakers for "The Next Generation in Infection Biology" microsymposium on June 6 2025.
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Kaiser Lab
RentmeisterLab
5 months ago
Come join our team! We have an opening for a research associate ("Ratsstelle"). Expertise in nucleotide chemistry and LC-MS is required. 👉
job-portal.lmu.de/jobposting/b...
Deadline for application is June 01, 2025.
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Research associate (Ratsstelle) for the duration of 5 years with the option to be tenured (m/f/x)
https://job-portal.lmu.de/jobposting/bb5c00be693707cfa4ac90ed2f3111d839526d360?ref=homepage
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Kaiser Lab
Zeynep Baharoglu
6 months ago
Heat stress impacts RNA modification levels in E. coi !🦠
#microsky
#rnasky
academic.oup.com/nar/article/...
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Direct RNA sequencing of the Escherichia coli epitranscriptome uncovers alterations under heat stress
Abstract. Modifications of RNA, known as the epitranscriptome, affect gene expression, translation, and splicing in eukaryotes, with implications for devel
https://academic.oup.com/nar/article/53/6/gkaf175/8089754?login=true
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Kaiser Lab
Kurianlab
6 months ago
RNA Salon in mRNA Translation We have an exciting lineup with Keynote by: Marvin Tanenbaum (Hubrecht/ Delft) Please RT
@goetheuni.bsky.social
@cpi-exstra.bsky.social
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We are happy to announce that we will host the 1st workshop of the human RNome project consortium in Frankfurt am Main this August. More information can be found at
kaiser-lab.de
6 months ago
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The third is from Hagen, who studied artificial nucleases and their potential for rRNA removal. you can read up his work in PlosOne. Well done Hagen!
journals.plos.org/plosone/arti...
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Chemical nucleases are a robust alternative for RNase H cleavage of human ribosomal RNA
Besides the abundant ribosomal and transfer RNA transcripts (rRNA and tRNA, respectively), there are tens of thousands of long coding (mRNA) and non-coding transcripts (lncRNA) within each cell whose ...
https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0318697
6 months ago
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The second is from Nur. She originally wanted to use hydrazine for detection of pseudouridine in oligonucleotide mass spectrometry. Along her way, she uncovered an impressive reactivity towards 8 modified nucleosides and determined the reaction products. Well done Nur!
www.nature.com/articles/s42...
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Chemical reactivity of RNA and its modifications with hydrazine - Communications Chemistry
RNA modifications are essential for the regulation of cellular processes and have a key role in diseases, however, the differentiation between isomers of nucleosides remains a major challenge in the a...
https://www.nature.com/articles/s42004-025-01444-y
6 months ago
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2025 is treating us well. We have 3 papers from the Kaiser Lab accepted until now. The first is a study on the impact of 5-fluoruracil (5FU) on tRNA and rRNA modifications. Well done Max!
academic.oup.com/nar/article/...
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NAIL-MS reveals tRNA and rRNA hypomodification as a consequence of 5-fluorouracil treatment
Abstract. Recent studies have investigated RNA modifications in response to stressors like chemical agents, including the anticancer drug 5-fluorouracil (5
https://academic.oup.com/nar/article/53/4/gkaf090/8041998?login=false
6 months ago
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Kaiser Lab
Ivan Dikic
8 months ago
Look forward to welcoming all participants in Frankfurt for some exciting science, building networks and having a good time 🤗🍀
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reposted by
Kaiser Lab
Lillemeier lab
8 months ago
Miao and colleagues show that tRNA m1A modification regulates cholesterol biosynthesis to promote antitumor immunity of CD8+ T cells. Deletion of RNA m1A “writer” gene Trmt61a enhances the tumor-killing capacity of CD8+ T cells.
doi.org/10.1084/jem....
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tRNA m1A modification regulates cholesterol biosynthesis to promote antitumor immunity of CD8+ T cells
Activation of CD8+ T cells necessitates rapid metabolic reprogramming to fulfill the substantial biosynthetic demands. This article highlights the tRNA m1A
https://doi.org/10.1084/jem.20240559
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Kaiser Lab
Nucleic Acids Research
8 months ago
Hello Everyone! 👋 Nucleic Acids Research is excited to be on Bluesky! Please follow us for the latest
#Research
,
#Breakthrough
articles, journal issues and more. Also, please consider adding us to your starter packs!
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Kaiser Lab
Markus Schosserer
9 months ago
My NUS Yong Loo Lin School of Medicine Helathy Longevity Webinar is online now. I am very grateful to Brian Kennedy for the invitation to share our latest research on
#RNAmodifications
and for the excellent discussion.
youtu.be/fFAr5RF_2vs?...
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Exploring Ribosomal RNA Modifications in Cellular and Organismal Ageing l Dr Markus Schosserer
YouTube video by NUS Medicine
https://youtu.be/fFAr5RF_2vs?si=_jFeebKCVpEHcQh2
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Kaiser Lab
David McQuarrie
8 months ago
"YTHDF2 functions as a dual reader where it stabilizes mRNAs as a 5-methylcytosine (m5C) reader ..."
doi.org/10.1016/j.ce...
#RNA
#RNAsky
#RNAbiology
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YTHDF2 promotes ATP synthesis and immune evasion in B cell malignancies
YTHDF2 modulates oncogenic transformation and immune evasion across multiple B cell cancers by stabilizing m5C-modified mRNAs and destabilizing m6A-modified mRNAs, thereby serving as a dual reader for...
https://www.cell.com/cell/fulltext/S0092-8674(24)01324-2?_returnURL=https%3A%2F%2Flinkinghub.elsevier.com%2Fretrieve%2Fpii%2FS0092867424013242%3Fshowall%3Dtrue
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Kaiser Lab
Rob Schneider
8 months ago
Please RS/RT.
#GordonConference
"Histone and DNA Modifications" Program is now online 🍾
#epigenetics
#chromatin
#histones
20.-25. July. Il Ciocco 🇮🇹 Register now: ➡️
shorturl.at/AtAjz
Exciting speaker lineup, many slots for talks selected from abstracts
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The Kaiser Lab is migrating to bluesky. Follow us for updates on our ongoing RNA modification research using mass spectrometry tools.
8 months ago
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