Benedetta Bolognesi
@bennibolo.bsky.social
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📥 520
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Biologist, Explorer. Group Leader @ibecbarcelona.eu Protein Phase Transitions.
reposted by
Benedetta Bolognesi
Kalli Kappel
3 months ago
In the nucleus, many intrinsically disordered proteins (IDPs) form condensates. What IDP sequence features drive this behavior? We developed CondenSeq, a high-throughput approach to measure nuclear condensate formation, and applied it to ~14,000 IDPs to find out!
rdcu.be/eq975
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Characterizing protein sequence determinants of nuclear condensates by high-throughput pooled imaging with CondenSeq
Nature Methods - CondenSeq is an imaging-based, high-throughput platform for characterizing condensate formation within the nuclear environment, uncovering the protein sequence features that...
https://rdcu.be/eq975
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New cocktail 🍹 in town - in collaboration with
@benlehner.bsky.social
: Massive combinatorial mutagenesis + amyloid kinetics selection + thermodynamic modelling showing us the portrait 🎨 of an amyloid transition state. Read about it in this great thread:
add a skeleton here at some point
3 months ago
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Benedetta Bolognesi
Danielle Beckman
4 months ago
A black hole in the early universe? Sometimes I like to imagine that I operate a telescope, not a microscope 😁. The hole in the middle of the image is actually a blood vessel. The stars are astrocytes🟡 in the human brain, interacting with beta-amyloid🔵. The brain is from a donor with
#Alzheimer
.
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Candle-lit commuting sponsored by
@rodalies.info
🕯️🕯️🕯️
4 months ago
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Benedetta Bolognesi
John Burn-Murdoch
4 months ago
Full slide deck here from our talk yesterday on the gender divide and relationship recession, featuring many more countries and plenty of economic data too:
www.dropbox.com/scl/fi/1lp1d...
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Benedetta Bolognesi
Ed Yong
4 months ago
I urge everyone to read Unbreaking’s new page on everything the govt is doing to destroy & diminish medical research funding. It’s the best thing I’ve read on this topic:
@lizneeley.bsky.social
& co have such done an incredible job.
unbreaking.org/issues/medic...
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Medical Research Funding — Unbreaking
How the administration is breaking the government, and what that means for all of us.
https://unbreaking.org/issues/medical-research-funding/
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And what a great talk to end
#VariantEffect25
! Thanks to the amazing crowd that travelled to Barcelona and made MSS25 such a fantastic meeting. Lots to think about now! 🧦🗺️☀️
add a skeleton here at some point
4 months ago
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Fantastic talk
#VariantEffect25
by
@pollyfordyce.bsky.social
on how much we can understand about sequence-function relationships once we are able to factor in kinetic 🏎️rates. Microfluidics 💧💧for the win!
add a skeleton here at some point
4 months ago
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reposted by
Benedetta Bolognesi
Isabelle Zane
4 months ago
@pollyfordyce.bsky.social
at
#VariantEffect25
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reposted by
Benedetta Bolognesi
Jonathan Frazer
4 months ago
Good views, food and even better company at
#VariantEffect25
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reposted by
Benedetta Bolognesi
IBEC | Institute for Bioengineering of Catalonia
4 months ago
The first poster session just started!
#VariantEffect25
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reposted by
Benedetta Bolognesi
Jonathan Frazer
4 months ago
Welcome back from the lunch break. Kicking off the afternoon session at
#VariantEffect25
we welcome Patrick Hsu
@pdhsu.bsky.social
all the way from
@arcinstitute.org
– Bridging biology and AI for genome design 💥🧬🤖
#SynBio
#AI
Let’s gooo! 🚀
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reposted by
Benedetta Bolognesi
Jonathan Frazer
4 months ago
It is a deeply inspiring story, reminding us why we do what we do.
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reposted by
Benedetta Bolognesi
Jonathan Frazer
4 months ago
Welcome back from the coffee break and to the last session of Workshop 1 of
#VariantEffect25
.
@pascalnotin.bsky.social
is giving us an overview of protein fitness prediction models!
#AI
#ProteinML
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reposted by
Benedetta Bolognesi
Jonathan Frazer
4 months ago
Next up at
#VariantEffect25
Workshop 1 we have Noelia Ferruz! From Rosetta to Flow Matching: The Evolution of Protein Design -How Should You Begin Today?
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reposted by
Benedetta Bolognesi
Jonathan Frazer
4 months ago
Let’s get this party started! Kicking off workshop 1 of
#VariantEffect25
we have Albert Escobedo — From Fitness to Free Energy: Thermodynamic Modeling of Protein DMS Data for Accurate Genetic Prediction with MoCHI 🍡🧬
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reposted by
Benedetta Bolognesi
Doug Fowler
4 months ago
Our "Atlas of Variant Effects 2030 Roadmap" is live:
zenodo.org/records/1542...
1/n
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Atlas of Variant Effects 2030 Roadmap: resolving human variants of uncertain significance
At the Clinical Atlas of Variant Effects meeting (CLAVE meeting, July 2024, Pittsburgh USA), we developed recommendations for a draft atlas that can be realized by 2030, with a focus on empowering gen...
https://zenodo.org/records/15420414
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reposted by
Benedetta Bolognesi
Jamison Foser
4 months ago
there are 1,100 words in this article and zero of them are "bus"
add a skeleton here at some point
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@marianomartin.bsky.social
discussing amyloid formation from random sequence extensions at our first CNS 🧠network event
@ibecbarcelona.eu
Find out more this week on
@pnas.org
!
www.pnas.org/doi/10.1073/...
5 months ago
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Countdown officially started!
#VariantEffect25
@varianteffect.bsky.social
add a skeleton here at some point
5 months ago
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reposted by
Benedetta Bolognesi
IBEC | Institute for Bioengineering of Catalonia
5 months ago
CAT 1/ 🧵 Una IA catalana desxifra el llenguatge secret de les proteïnes "enganxoses" CANYA, desenvolupada pel
@crg.eu
i l’
#IBEC
, pot predir quan i per què es formen agregats proteics, un procés relacionat amb malalties com l’Alzheimer 👇
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Blackout pipetting
@ibecbarcelona.eu
5 months ago
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reposted by
Benedetta Bolognesi
IBEC | Institute for Bioengineering of Catalonia
6 months ago
🏆 Congrats to
#IBEC
researcher Dr. Irene Marco-Rius on winning the 2025 Anatole Abragam Prize! 🎉 Her groundbreaking work in hyperpolarized
#MRI
& organ-on-a-chip tech is transforming disease diagnosis & therapy monitoring. 🔬👏
#MagneticResonance
#ScienceExcellence
#ISMARENC2025
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reposted by
Benedetta Bolognesi
Itai Yanai
6 months ago
David Baker talks about how the current uncertainty and instability hinder creativity because of the difficulty in thinking long-term. From this week’s Night Science Podcast
nightscience.buzzsprout.com/1744020/epis...
@nightsciencepod.bsky.social
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reposted by
Benedetta Bolognesi
Gabi Heller
6 months ago
We’re looking for fellow nerds to help us make disordered proteins druggable. Love
#IDPs
,
#MD
,
#NMR
,
#AI
,
#DrugDiscovery
, or
#MassSpec
? Let’s talk.
@bindresearch.org
is hiring across the board:
bindresearch.org/careers/
#compchem
#compbio
#NMRChat
#TeamMassSpec
#chemjobs
@chemjobber.bsky.social
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Careers
Careers
http://bindresearch.org/careers/
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reposted by
Benedetta Bolognesi
John Bull
6 months ago
“If she wants to know something specific, but doesn’t want people to notice her asking questions, she should simply make incorrect statements while in the company of experts. Her companions will correct her, especially if they're men.” - Advice for female agents in WW2, provided during SOE training
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Benedetta Bolognesi
Dave Baltrus 🦦
6 months ago
In my 25 years since high school I’ve seen 1. HIV/AIDS go from death sentence to manageable with drugs 2. Cystic fibrosis go from pretty much an extended death sentence to manageable with drugs 3. Sickle cell go from a horrible disease to (almost maybe) cured by gene therapy Simply incredible
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reposted by
Benedetta Bolognesi
Carlo Camilloni
about 1 year ago
Light chain dimers in native conditions are not all the same, check what we found!
#alAmyloidosis
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reposted by
Benedetta Bolognesi
Nicky Whiffin
7 months ago
A few weeks ago, I had an incredibly emotional call with James Coney, a writer for the Sunday Times whose son Charlie was in the
@genomicsengland.bsky.social
100k project and was recently diagnosed with ReNU syndrome. This beautiful article tells their story ❤️
www.thetimes.com/article/0bcc...
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My son Charlie — and the breakthrough that changed our lives
James Coney and his wife, Sarah, struggled not knowing why their 12-year-old was born with a severe learning disability. In their darkest moments, they blamed themselves. Then, out of the blue, came a...
https://www.thetimes.com/article/0bcc6835-04fe-4830-9545-d224319712fc?shareToken=3f3d0f9a0eb43b9e24e1046dbe197390
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reposted by
Benedetta Bolognesi
BWJones
7 months ago
By
@katherinejwu.com
"The NIH... supported 99 percent of the drugs approved in the U.S. from 2010 to 2019. The agency has had a hand in “nearly all of our major medical breakthroughs over the past several decades,” The NIH is in a struggle for its (and our) lives. This is existential to America:
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Inside the Collapse at NIH
Administration officials pressured NIH to avoid clear advice from the agency’s own lawyers to restart grant funding now.
https://www.theatlantic.com/health/archive/2025/02/nih-grant-freeze-biomedical-research/681853/?gift=4OW_ksNtOXRAREHU203IjoAlHi07ZXTNu8mcd9VAsTg&utm_source=copy-link&utm_medium=social&utm_campaign=share
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reposted by
Benedetta Bolognesi
IBEC | Institute for Bioengineering of Catalonia
7 months ago
⏰ Deadline alert! 🔴 Last week to submit abstracts & get early bird registration for the 8th Mutational Scanning Symposium! Join experts in genomics, protein science & precision medicine to discuss cutting-edge variant interpretation
#VariantEffect25
🔗
events.ibecbarcelona.eu/mutational-s...
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Benedetta Bolognesi
Atlas of Variant Effects Alliance
7 months ago
The 8th Annual Mutational Scanning Symposium is just around the corner!
#VariantEffect25
What we are looking forward to: 🗣️Great talks! 🛠️Workshops! 🏆Poster session and awards! 🌏Amazing community! ⌛️March 1st deadline for abstracts!
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Benedetta Bolognesi
Atlas of Variant Effects Alliance
7 months ago
Register soon to receive the early bird rate! Mutational Scanning Symposium "Mapping and Modelling Variant Effects at Scale"
#VariantEffect25
🗓️ May 21-23, 2025 📍Barcelona (or online) ℹ️
www.varianteffect.org/mss2025
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👇👇 check this out for exciting+impactful science in a great working environment. 💻☀️
add a skeleton here at some point
8 months ago
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reposted by
Benedetta Bolognesi
IBEC | Institute for Bioengineering of Catalonia
8 months ago
🚨 PhD Opportunities at IBEC! 🚨 Join
#IBEC
, a Severo Ochoa Research Centre, and start your research career with one of 12 fully-funded PhD fellowships in bioengineering! 🌟
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Countdown has started! Excited to welcome you in Barcelona for the 8th Mutational Scanning Symposium
#VariantEffect25
🌍
@ibecbarcelona.eu
@crg.eu
@varianteffect.bsky.social
events.ibecbarcelona.eu/mutational-s...
8 months ago
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Benedetta Bolognesi
Atlas of Variant Effects Alliance
8 months ago
🗓️ Mark your calendars! This is one not to miss!
www.varianteffect.org/seminar-series
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reposted by
Benedetta Bolognesi
Tobias Warnecke
8 months ago
Wanna work with us? This is one great vehicle for international postdoc applicants to join a UK lab, including ours:
royalsociety.org/grants/newto...
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Newton International Fellowships | Royal Society
This fellowship is for non-UK scientists who are at an early stage of their research career and wish to conduct research in the UK.
https://royalsociety.org/grants/newton-international/
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reposted by
Benedetta Bolognesi
Yaroslav Trofimov
9 months ago
Iranian authorities detain Italian war correspondent Cecilia Sala and jail her in Evin prison. Journalism is not a crime. Bring her home.
www.ilfoglio.it/esteri/2024/...
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Journalism is not a crime. Bring Cecilia Sala home
The journalist was arrested in Iran on December 19th and is now detained in Evin Prison. Tehran has chosen to challenge everything the West universally hol
https://www.ilfoglio.it/esteri/2024/12/27/news/journalism-is-not-a-crime-bring-cecilia-sala-home-7278433/amp/
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reposted by
Benedetta Bolognesi
Reuters Institute
9 months ago
Award-winning Italian reporter and podcaster Cecilia Sala was arrested in Tehran earlier this month. Our colleague
@marinaadami.bsky.social
profiled this pioneering and fearless journalist in this piece we published back in 2022
reutersinstitute.politics.ox.ac.uk/news/how-pio...
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How a pioneering Italian podcaster is leading innovation in a print-focused media industry
“The idea for the podcast was to tell a story from the world every day,” says Cecilia Sala, the 26-year-old Italian journalist behind 'Stories'.
https://reutersinstitute.politics.ox.ac.uk/news/how-pioneering-italian-podcaster-leading-innovation-print-focused-media-industry
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reposted by
Benedetta Bolognesi
Fritz Roth
10 months ago
Calling all systems and computational biologists in search of a faculty position: We have Assistant and Associate Professor positions! 🚀 Pittsburgh is beautiful, and we are doing amazing science here.
cfopitt.taleo.net/careersectio...
cfopitt.taleo.net/careersectio...
Please apply by Dec 2!
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Faculty.Professor.Assistant - Full-Time
Click the link provided to see the complete job description.
https://cfopitt.taleo.net/careersection/pitt_faculty_external/jobdetail.ftl?job=24006607
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reposted by
Benedetta Bolognesi
Jonathan Frazer
10 months ago
Models for predicting the effect of genetic variation have come a long way in the last few years. When it comes to diagnosis and preventative care, how can we make safe and yet efficient use of them? Here are some of our thoughts
authors.elsevier.com/c/1k7J9_4GsX...
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https://authors.elsevier.com/c/1k7J9_4GsX0xy
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