David Lowry
@davidlowry.bsky.social
📤 3772
📥 2130
📝 1363
Professor of Plant Evolutionary Genetics at Michigan State University.
reposted by
David Lowry
Jeffrey Ross-Ibarra
about 11 hours ago
I talked about this at PEQG a few weeks ago. In addition to
github.com/RILAB/argprep
(preps your genome assemblies for SINGER), argtest
github.com/RILAB/argtest
does some QC to clean up an ARG estimated with SINGER.
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Happy 250 America. Say what you will about the execution, it’s still a damn good experiment.
about 11 hours ago
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reposted by
David Lowry
Thiago Carvalho
7 days ago
'The United States was once the research engine of the world. Now China may be taking the dominant role, thanks to massive investment and a disruptive year for American universities under the Trump administration.'
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How the U.S. is losing ground to China in university research
Two researchers — one in Massachusetts and one in Shanghai — hoped for the same breakthrough: a gene therapy for deaf children. New Chinese investment in science propelled the one who got there first.
https://www.npr.org/2026/03/02/nx-s1-5696465/nadworny-china-research?utm_medium=social&utm_campaign=npr&utm_source=bsky.app&utm_term=nprnews
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reposted by
David Lowry
Noah Whiteman
9 days ago
So excited to announce our search for 4 postdocs (funded by the Simons Foundation) who will use genomics to "test how ecological interactions, natural selection, natural enemies, hybridization & environmental gradients shape...tropical tree communities" in Panama:
stri.si.edu/story/bci-ev...
...1
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https://stri.si.edu/story/bci-evolutionary-dynamics-and-genomic-ecology-project...1
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reposted by
David Lowry
Rachel Germain
11 days ago
To the
#Evol2026
folks, I am recruiting MSc/PhD students (with or without their own funding) - please send people my way if you know of anyone interested in blending ecology & evolution!
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reposted by
David Lowry
Jenna Norton
11 days ago
Members of Congress calling out the blatantly unlawful proposed OMB rule on federal grantmaking. Let’s keep the pressure on!
thehill.com/newsletters/...
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Democrats demand OMB rescind grant rule
Presented by Planned Parenthood{beacon} Health Care Health Care PRESENTED BY The Big Story Lawmakers raise alarms about NIH grant changes A group of House Democrats is calli…
https://thehill.com/newsletters/health-care/5935074-democrats-demand-omb-rescind-grant-rule/
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nph.onlinelibrary.wiley.com/doi/10.1111/...
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Phenotypic plasticity is broadly adaptive across an elevation gradient in the Cutleaf Monkeyflower
Leaf shape plasticity expression is variable in Mimulus laciniatus.
https://nph.onlinelibrary.wiley.com/doi/10.1111/nph.71365
12 days ago
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Christine Beveridge leading off the ARC Centre of Excellence for Plant Success in Nature and Agriculture today in Northern New South Wales. Christine has done an amazing job bringing this Centre together and leading it for the past half decade.
12 days ago
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Happy Solstice from down under.
13 days ago
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Back in Brisbane, QLD for the month to attend conferences and do a bit of research.
16 days ago
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reposted by
David Lowry
Mark Histed
17 days ago
The Battle over the Constitution Has Spread to American Science. I'm out in the
@theatlantic.com
today about the new OMB proposed rule. It's just the longtime agenda of the the Supreme Court. US science and cancer cures now all depend on us picking up a fight with the Roberts Court.
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The Unitary Executive Takes Over New Territory
The Trump administration’s theory of how the federal government should work is a threat to American science.
https://www.theatlantic.com/ideas/2026/06/unitary-executive-scientific-research/687565/?gift=k_OobsDbpwjWwm8XT1W4w-XY8MjFiEoR45aHXSDSPpk&utm_source=copy-link&utm_medium=social&utm_campaign=share
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US folks: If you haven’t yet emailed/called your elected representatives about the proposed OMB rule changes, pleased do so now. Staffers in those offices tally those comments and numbers do matter.
18 days ago
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World Cup today: Three games ending in a tie and one game that is currently tied. I really want to be excited, but I'm having a hard time getting there.
19 days ago
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reposted by
David Lowry
Jeffrey Ross-Ibarra
19 days ago
People.
@ksamuk.bsky.social
and others have made this argument before. There’s good software to do this right. Here’s the argument again: Invariant sites matter! They’re not in your standard vcf and many programs pretend they are anyway.
academic.oup.com/gbe/article/...
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A Recipe for a Good π. How to Properly Estimate Population Genetics Summary Statistics and Why we Should Systematically Report Them
Abstract. Many long-standing questions in population genomics can now be addressed through comparative analyses and by leveraging the vast amount of genomi
https://academic.oup.com/gbe/article/18/6/evag103/8702411
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reposted by
David Lowry
Hiroshi Takagi (Nagoya University)
21 days ago
Delighted to share that our new article has been published in
@plantcellphysiol.bsky.social
. We investigated mechanisms underlying GA-dependent
#Arabidopsis
stem elongation through cell growth measurements, hormone quantification, and gene expression analyses.
academic.oup.com/pcp/advance-...
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GA20ox1-mediated GA4 production promotes inflorescence stem growth in Arabidopsis via inner-layer cell proliferation
Abstract. Elongation of flowering stems is crucial for successful sexual reproduction and seed dispersal, yet its cellular mechanisms remain largely unknow
https://academic.oup.com/pcp/advance-article/doi/10.1093/pcp/pcag077/8707359?utm_source=authortollfreelink&utm_campaign=pcp&utm_medium=email&guestAccessKey=
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reposted by
David Lowry
Simons Foundation
2 months ago
Now accepting applications for our 2027 Simons Graduate Fellowships in Ecology and Evolution! These awards support students entering U.S.-based Ph.D. programs to conduct
#ecology
and
#evolution
research. Deadline is June 30, 2026:
bit.ly/4umYKZd
#science
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Applications for 2027 Simons Graduate Fellowships in Ecology and Evolution Now Open
The Simons Foundation’s Life Sciences division is now accepting applications for its 2027 Simons Graduate Fellowships in Ecology and Evolution.
https://bit.ly/4umYKZd
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reposted by
David Lowry
Jeffrey Ross-Ibarra
21 days ago
Verdict is in .
#PEQG26
remains my favorite conference. Thanks to
@genetics-gsa.bsky.social
and the organizers for continuing to make it awesome.
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The Mimulus community at
#PEQG26
!!!!!! Wonderful meeting with an awesome community. Looking forward to
#Mimulus27
!!!!!!
21 days ago
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reposted by
David Lowry
Marcel Cardillo
23 days ago
Really nice memoriam to Robert Ricklefs by Brian McGill:
dynamicecology.wordpress.com/2026/06/11/r...
Ricklefs got ecologists to think big: about the role of history, biogeography & macroevolution on ecological patterns. More than anyone, his work shaped the course of my career.
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Robert Ricklefs – in memoriam
Robert Ricklefs, a giant of ecology, passed away on Sunday. It is hard to overstate the extensive impact Bob had on the field. He was elected a member of the National Academy of Sciences in the US,…
https://dynamicecology.wordpress.com/2026/06/11/robert-ricklefs-in-memoriam/
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reposted by
David Lowry
Henry Arenas-Castro
23 days ago
After growing thousands of them in the greenhouse, I finally could meet my study system in the wild, thanks
#PEQG26
! Come to my talk tomorrow at 11:00 am to learn how two sympatric monkeyflowers with weak reproductive isolation maintain their phenotypic differentiation
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reposted by
David Lowry
Ryan Gutenkunst
24 days ago
Just saw David Tian give a great talk about this work at
#PEQG26
!
add a skeleton here at some point
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reposted by
David Lowry
Madison Plunkert (she/her)
24 days ago
How do plants locally adapt to challenging habitats despite ongoing gene flow? Come find me tomorrow at poster 236W to chat about life history divergence on small spatial scales in the yellow monkeyflower!
#PEQG26
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Looking forward to all of these Crow Early Career Research Award talks at
#PEQG26
starting now.
24 days ago
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Wooo-hooo!!! Stoked to be at
#PEQG26
add a skeleton here at some point
25 days ago
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The Backrooms turned out to actually be a solid film.
30 days ago
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reposted by
David Lowry
Aaron Ragsdale
about 1 month ago
I’m looking to hire one or two postdocs - possible projects include pop gen theory, methods development, and human evolutionary inference. Please share, and email if you are interested. More info:
evoldir.net/brian/evoldi...
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https://evoldir.net/brian/evoldir/PostDocs//UWisconsinMadison.PopulationGenetics
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White House Seeks to Impose Political Test on Billions in Federal Grants
www.nytimes.com/2026/06/02/u...
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White House Seeks to Impose Political Test on Billions in Federal Grants
https://www.nytimes.com/2026/06/02/us/politics/trump-budget-grants-omb-vought.html?smid=nytcore-ios-share
about 1 month ago
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reposted by
David Lowry
Botany One
about 1 month ago
Asst Professor - Plant or Fungal Genomics // University of Wyoming
jobs.chronicle.com/job/37995586...
The Department of Botany and the School of Computing invites applications for a tenure-track position in Plant or Fungal Genomics at the rank of Assistant Professor.
#BotanyJobs
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Asst Professor - Plant or Fungal Genomics - Wyoming, United States job with University of Wyoming | 37995586
Asst Professor - Plant or Fungal Genomics Join Our Campus Community! Thank you for your interest in joining the University of Wyoming. Our...
https://jobs.chronicle.com/job/37995586/asst-professor-plant-or-fungal-genomics/
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reposted by
David Lowry
Matthew Hahn
about 1 month ago
Very happy to announce a big new paper from the lab, led by grad students
@smishra677.bsky.social
and Laia Pomar-Pallarès (in collaboration with
@roblanfear.bsky.social
). We introduce a new way to study introgression, with accompanying software (DAFT) 1/n 🧵
www.biorxiv.org/content/10.6...
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https://www.biorxiv.org/content/10.64898/2026.05.30.728990v1
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reposted by
David Lowry
Murillo R.
about 1 month ago
Check out our new paper presenting pg-gpu, a GPU-accelerated population genetics python package:
www.biorxiv.org/content/10.6...
1/3
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https://www.biorxiv.org/content/10.64898/2026.05.29.728868v1
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Tonight’s sunset in California
about 1 month ago
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reposted by
David Lowry
Gideon Bradburd
about 1 month ago
postdoc alert 🚨! NIH-funded postdoc in my lab to work on Ancestral Recombination Graphs in space. Please spread the word widely in your networks, and please reach out if you're interested! (2-3yr position, start date flexible, pay/benefits good!). details here:
careers.umich.edu/job_detail/2...
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recruitment
Multiple positions available: Postdoc PhD students
https://www.genescape.org/recruitment.html
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reposted by
David Lowry
Julia Kreiner
about 1 month ago
Abstract deadline for Midwest Pop Gen 2026 extended to June 12th! Aug 21-22 at UChicago — free, trainee-oriented meeting with talks, posters + Friday BBQ at Promontory Point. Chicago in August doesn't get better than this...
jkreinz.github.io/mwpg2026
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Internal emails within MSU seem to have come to a halt in the past hour...
about 1 month ago
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Ecotypes and Inversions!!!
www.quantamagazine.org/how-ecotypes...
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How Ecotypes Harbor the Genetic Memory of a Species’ Past | Quanta Magazine
Evolutionary biologists are uncovering genomic mechanisms that allow populations to adapt quickly to different, hyperlocal habitats without splitting into new species.
https://www.quantamagazine.org/how-ecotypes-harbor-the-genetic-memory-of-a-species-past-20260521/
about 1 month ago
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reposted by
David Lowry
Evolutionary Applications
about 2 months ago
We're delighted to announce Sarah Sanderson (McGill University) as the winner of the 2025 Louis Bernatchez Memorial Prize for the best student-led paper in Evolutionary Applications! Congratulations,
@sarahsanderson.bsky.social
🎉🎉🎉
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reposted by
David Lowry
Brendan Cantwell
about 1 month ago
“To Michigan and all of its lakes and tributaries.”
add a skeleton here at some point
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reposted by
David Lowry
MSU Plant Resilience Institute
about 1 month ago
Congratulations to PRI Postdoc Fellow
@derekdenney.bsky.social
, a co-author on the study honored with the 2026 W.S. Cooper Award from
@ecologicalsociety.bsky.social
! Read "Adaptation and gene flow are insufficient to rescue a montane plant under climate change" at:
www.science.org/doi/10.1126/...
add a skeleton here at some point
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reposted by
David Lowry
Dan Schrider
about 1 month ago
Update! The posting for the postdoc opening in my lab is up! Apply here:
unc.peopleadmin.com/postings/319...
add a skeleton here at some point
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reposted by
David Lowry
Greg Owens
about 2 months ago
UVic is hiring a Terrestrial Plant Ecologist Assistant Professor! Come join our department! We're nice and Victoria is awesome.
www.uvic.ca/science/biol...
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Faculty Position in Terrestrial Plant Ecology - University of Victoria
Department: Biology                 &am...
https://www.uvic.ca/science/biology/news/current/faculty-position-in-terrestrial-plant-ecology.php
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That was quite the board meeting…
about 2 months ago
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reposted by
David Lowry
Ran Blekhman
about 2 months ago
Some thoughts on where AI in genomics stands right now, building on a symposium we recently hosted at UChicago. Seven points, ranging from why scaling DNA models hasn't delivered, to why metadata is the real bottleneck, to the weird backlash against AI in academia
open.substack.com/pub/blekhman...
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Seven points on the current state of AI in genomics
A grounded take from the messy middle of an AI revolution
https://open.substack.com/pub/blekhman/p/seven-points-on-the-current-state?r=ptsy3&utm_campaign=post-expanded-share&utm_medium=web
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Amazing to finally get all of my lab group together in one place! I think this is the first time that this has happened since before the pandemic.
about 2 months ago
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It’s been great to be part of this awesome institute for the past decade. I feel immensely grateful.
add a skeleton here at some point
about 2 months ago
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Without question, this is hysteria.
www.ipm.org/news/2026-04...
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‘Hysteria’ or national security? IU researcher from China to be deported
Youhuang Xiang broke the law by not declaring a shipment of plasmid DNA, but colleagues say the substance is harmless and important for his research.
https://www.ipm.org/news/2026-04-17/hysteria-or-national-security-iu-researcher-from-china-to-be-deported
about 2 months ago
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reposted by
David Lowry
Charlie Anderson
2 months ago
Penn State Biology is hiring! We have an opening for a tenure-line faculty position in plant biology - if you'd like to pursue awesome science in a supportive and interdisciplinary community of researchers, consider applying!
psu.wd1.myworkdayjobs.com/en-US/PSU_Ac...
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Tenure-Track Faculty Position in Plant Biology
APPLICATION INSTRUCTIONS: CURRENT PENN STATE EMPLOYEE (faculty, staff, technical service, or student), please login to Workday to complete the internal application process. Please do not apply here, a...
https://psu.wd1.myworkdayjobs.com/en-US/PSU_Academic/job/Tenure-Track-Faculty-Position-in-Plant-Biology_REQ_0000077737-1
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reposted by
David Lowry
Terry McGlynn
2 months ago
I've just spent the last year on the administrative side of things and here are some of the lessons I've learned (or not learned).
#academicsky
🧪
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What I learned in my year as Academic Senate Chair
My 1-year term as Chair of Academic Senate is winding to a close. Phew. My obligations in this term end in two days. At that time, the new elected Chair steps into the role. Now's a good time to refl...
https://scienceforeveryone.science/what-i-learned-in-my-year-as-academic-senate-chair/
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Haven’t watched the Derby for years. Choose a good one to tune into for so many reasons.
add a skeleton here at some point
2 months ago
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reposted by
David Lowry
Holly Moeller
2 months ago
Simons Graduate Fellowship Applications are open! If you're applying to Ph.D. programs in ecology and/or evolution this year, or if you're an incoming Ph.D. student who won't start your degree program until Fall 2026 or later, apply!
www.simonsfoundation.org/grant/simons...
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Simons Graduate Fellowships in Ecology and Evolution
The purpose of these awards is to provide support for students entering U.S.-based Ph.D. programs with a plan to perform research in ecology and evolution. While we will consider all projects in ecolo...
https://www.simonsfoundation.org/grant/simons-graduate-fellowships-in-ecology-and-evolution
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reposted by
David Lowry
Jae Young Choi
2 months ago
I'm looking to hire a postdoc. Please share if you can!
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