✨New Year's resolutions involve learning something new?✨ Then apply for our “Introduction to Image Analysis” workshop in Cardiff in May 2026! Deadline for applications is January 16th. 🔗⬇️ www.rms.org.uk/rms-event-ca... @royalmicrosoc.bsky.social @david-j-barry.bsky.social @martinjones.bsky.social

⬇️⬇️⬇️ This is a great opportunity to learn from the best about how to apply AL/ML to microscopy images. Applications open!

We're a bit late in ringing in the giving season, but it is indeed upon us. Enjoy our special edition holiday logo ☃️ and, if you can spare a bit and appreciate napari, please donate to our development efforts! 🙏 CZI will match donations up to $75K. opencollective.com/napari/donate

Come on, do it. You know you want to. ⬇️

If you or your trainees are just getting started with image analysis of cells & are #CellProfiler -curious, here is a fairly thorough walk-through demo I did recently. Loading files, extracting metadata (fun with Regex!), identifying objects, measuring, filtering, QC, exporting: youtu.be/fO5nJdhj_7I

Do you have 2D-to-3D image registration challenges? Let me know about them here forum.image.sc/t/toward-bet...

No CBIAS would be complete without an image analysis workshop! Thanks Rocco, @giuliapaci.bsky.social and @makaefer.bsky.social for organising, we had fun helping out with teaching 🔬💻

And that’s a wrap for the @cbias.bsky.social napari workshop as well. Two days of learning, working collaboratively and finished off with a presentation from each of five project groups detailing the progress they made. Organised by Rocco D’Antuono, @giuliapaci.bsky.social and yours truly

BIOIMAGE ANALYSTS ASSEMBLE!!! #CBIAS2025

An immense thank you again to @cbias.bsky.social committee, sponsors and fellow imaging friends for this fantastic symposium! It's is not the end but the beginning of tons of papers to read, colleagues to contact, new collaborations to form. And most importantly, it's a 'see you soon' #CBIAS2026 🔬🥰

Topical conclusion from @helenajambor.bsky.social Scientists have tools to fight and make life better #CBiAS2025

And we’re off. #CBIAS2025 6th Edition, first outside of the Crick but impressed by the localities at @wellcomecollection.bsky.social @david-j-barry.bsky.social welcoming the community

It’s that time of year that I make my pilgrimage to London for the #CBIAS2025 and its trilogy of Ps: presentations, posters and panel discussions. But first I did some exploring… 🎶 London calling to the faraway towns 🎶

Less than a week to go for #CBIAS2025! A few hours left to register, in person in London or online over Zoom (registration deadline on Nov 20th) Find out all the information at the link below: www.crick.ac.uk/whats-on/cri...

Time is running out to register for #CBIAS2025

Don’t miss out on this inclusive, friendly, stimulating, fun event!

What a pertinent read today: www.science.org/content/arti... Let us not forget, champion the “invisible women“, fight for what’s right. What a coincidence that I had the privilege to name new @cci-liv.bsky.social workstations today: Henrietta Lacks, Bibha Chowdhuri and Katherine Johnson 👩‍🔬🔬⚛️🔭👩‍🔬

📢 Enhance your bioimage analysis skills - 2-day hands-on napari workshop. Learn to: - Set up conda envis install napari - Navigate napari GUI install plugins - Jupyter notebooks for basic IA - Apply new skills to real datasets w expert guidance 📅 Apply by NOW! www.crick.ac.uk/whats-on/cbi...

Want to enhance your image analysis skills with napari? We’re running a two-day training event on how to use napari to effectively analyse your bioimaging data. 🕒 Applications close on 15 September. Learn more and apply 👇 www.crick.ac.uk/whats-on/cbi...

Last chance saloon 🤠 to register for the hands-on 2-day napari training. Application deadline has been extended. www.crick.ac.uk/whats-on/cbi...

Super happy to see CLEM-Reg out in @natmethods.nature.com! A short thread on the algorithm behind it and how to try it out for yourself🧵(1/9) www.nature.com/articles/s41...

CLEM-Reg automates the 3D alignment of volume correlative light and electron microscopy data. www.nature.com/articles/s41...

Great news. Inclusive CBIAS all the way.

Next guest speaker at #CBIAS2025 is Christa Walther, community manager for @globias.bsky.social‬. GloBIAS is a worldwide association that brings together all those interested in #bioimageanalysis, offering opportunities for knowledge exchange, events, training, and resources. 🔗👇 www.globias.org

We continue the #CBIAS2025 speaker intros with @jytinevez.bsky.social, research engineer and core facility manager at the Institut Pasteur. Jean-Yves is one of the minds behind TrackMate and is part of F-BIAS, a federation of bioimage analysts across France 🔗👇 research.pasteur.fr/fr/member/je...

Last but not least for our #CBIAS2025 guest speaker line-up is Ilaria Testa, fellow at @scilifelab.se. Ilaria and team develop and apply novel super resolution microscopy approaches to understand fundamental biological processes relevant for health and disease 🔗👇 www.scilifelab.se/researchers/...

Applications close at the end of the week!

The #CBIAS2025 abstract deadline is this Sunday, August 31st. Submit your #BioImageAnalysis work, whether it’s a new tool or a biological discovery. #EarlyCareerResearchers, this is for you! Short and flash talk slots are up for grabs. www.crick.ac.uk/whats-on/cri...

At #CBIAS2025 we will also hear from Ewa Paluch from @cam.ac.uk. Ewa and their team take an interdisciplinary approach combining biology, imaging, mechanical testing and physical modelling to investigate the basic principles underlying animal cell morphogenesis 🔗👇 www.pdn.cam.ac.uk/directory/ew...

We continue the #CBIAS2025 speaker line-up with Dominik Kutra, senior research software engineer in the @ilastik-team.bsky.social. Dominik is one of the core developers of Ilastik, a user-friendly software that leverages machine learning algorithms to easily analyse bioimages 🔗👇 www.ilastik.org

Hello! Very excited to share our latest preprint, which is great news for us but terrible news for any diehard fans of PSNR and SSIM as image quality metrics in microscopy... (1/5) www.biorxiv.org/content/10.1...

Next up at #CBIAS2025 is @helenajambor.bsky.social‬ from the University of Applied Sciences of the Grisons. Helena researches data visualisation in the life sciences, combining their expertise with large datasets and their interest in data communication 🔗👇 helenajamborwrites.netlify.app/about

Our first #CBIAS2025 invited speaker is Andrew French from @uniofnottingham.bsky.social‬, who specialises in using AI to understand images. Their research interests include image analysis of plants and complex structures and image capture automation 🔗👇 www.nottingham.ac.uk/biosciences/...

The line-up for guest speakers at #CBIAS2025 is looking great! 🎉 We'll introduce them to you in the coming days, on the lead up to the deadline for abstract submission on August 31st. If you want a sneak peek in the meantime, check our website! www.crick.ac.uk/whats-on/cri...

🚨🚨🚨🚨 Don’t leave it too late to submit an abstract to #CBIAS2025 Tell us what you’re up to. 🚨🚨🚨🚨

Abstract submission #CBIAS2025 is closing on August 31st - we invite submissions on all topics related to #bioimageanalysis: new tools, biological discoveries using existing methods, and anything in between. Early-career researchers especially encouraged to submit! www.crick.ac.uk/whats-on/cri...

I am stunned! First edition of the "Bio-Imaging with Shakespeare" LinkedIn Newsletter (buff.ly/8x7Shiq) is out for 15h and already 130 subscribers. If you are interested in the topic FOLLOW ME on LinkedIn and Bsky and SUBSCRIBE on LinkedIn buff.ly/cLPh8eZ #bioimageanalysis #biovoxxel #fiji

𝐑𝐞𝐚𝐝 𝐭𝐡𝐞 𝐟𝐮𝐥𝐥 𝐚𝐫𝐭𝐢𝐜𝐥𝐞 𝐡𝐞𝐫𝐞: www.rms.org.uk/community/ne...

📢 After #CBIAS2025, join our hands-on 2-day napari training by @crick.ac.uk @ucl.ac.uk @liverpooluni.bsky.social From conda to plugins to Jupyter, practicals on real data with expert guidance. For Python/ImageJ coders. Apply by 1 Sept – limited to 30! crick.ac.uk/whats-on/cbias-napari-workshop-2025

Ready to automate your #microscopy #imageanalysis tasks? Applications are now open for our next "Introduction to Image Analysis" training course, in London at the @crick.ac.uk on October 27th-28th, 2025! 🔬💻 More info ⬇️ www.crick.ac.uk/whats-on/int...

Long awaited annual leave commencing

Registrations now open and free!! lnkd.in/gBQcrjda

@kbias.bsky.social, @pmsampaio.bsky.social, @tischi.bsky.social, Rocco D'Antuono, ‪and @haesleinhuepf.bsky.social ‬ did a great job of pulling the data together, to describe who we are, where we want to get, and how we get there together. Check out the preprint and join us today! (5/5)

Very happy to announce that this article is now published @dev-journal.bsky.social @biologists.bsky.social journals.biologists.com/dev/article/... With Suad Alsukari and Huei Teng Ng and @gastruloids.bsky.social

Special early bird rate registrations for #CBIAS2025 are closing soon, on July 20th! Register early to get your discounted ticket for this year's edition, happening at the Wellcome Trust in London on November 24th and 25th www.crick.ac.uk/whats-on/cri...

I'll be at the Learning Zone at #MMC2025 tomorrow afternoon with @martinjones.bsky.social, @lankylaste.bsky.social & Sara Salgueiro Torres, talking about how you can get started using #OpenSource software like #FIJI, @jupyter.org and @napari.org for #ImageAnalysis rms-daim.github.io/DAIM-MMC2025/

Of course @dalemoulding.bsky.social @alexpaynedwyer.bsky.social @crick.ac.uk @imperialcollegeldn.bsky.social @ucl.ac.uk @kingscollegelondon.bsky.social @royalmicrosoc.bsky.social

A great day of thinking about teaching bioimage analysis and designing courses at the #TrainTheTrainerBIA2025 @martinjones.bsky.social @makaefer.bsky.social @lankylaste.bsky.social @giuliapaci.bsky.social A well deserved fresh drink!

Lots of food for thought washed down with a cold pint after todays train the trainers 2025 CRICK Partnership & DAIM workshop #trainthetrainerBIA2025 @crick.ac.uk @ucl.ac.uk @imperialcollegeldn.bsky.social @martinjones.bsky.social @lankylaste.bsky.social @giuliapaci.bsky.social @dgaboriau.bsky.social