Day 2 of #Zidas2025 is happening! After a lecture from @ahklemm.bsky.social, it's now time for hands on with @ilastik-team.bsky.social by @benediktbest.bsky.social from Anna Kreshuk's lab and some tracking in the afternoon with #Trackmate from @jytinevez.bsky.social !

And we're ON! #Zidas2025 has officially started at the @biozentrum.unibas.ch, and the first day is introduction to image formation by Arne Seitz, Fiji by Joana Delgado Martins and Fiji scripting by me !

I couldn't find a napari plug-in to open all file formats using Bioio. So I made one : pypi.org/project/napa... Feel free to use it and suggest improvements 🎉

This summer, we are running a one-week intensive workshop on Python-based BioImage Analysis. Are there better ways to spend 6 days in mid-July in Boston?Probably. Would you learn as much as you will here? Probably not. Apply here: iac.hms.harvard.edu/bobiac/2025

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Applications are now open!

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Finally had a bit of time to play with multi-GPU deconvolution. Using @truenorth-ia.bsky.social and @haesleinhuepf.bsky.social previous work. Here it is in action in #BigDataViewer using async and lazy processing. Look at the two poor laptop GPUs going as fast as they can:

2025 is now well underway and we are happy to announce that ZIDAS is coming to Basel this year ! 2025.zidas.org

Entry-level position (80 - 100%) for bioimage analysis specialist at the Imaging Core Facility (IMCF) of the Biozentrum, University of Basel www.biozentrum.unibas.ch/open-positio... @unibas.ch #Biozentrum #Basel #research #science #joboffer #scientific

Come join us if you do image analysis!

sorry about that, i asked it to make sense of my life choices

If you're scared of IA taking over your job, we probably still have a few years ahead of us 😁

Core facility microscopists assemble!

#BIAToolTip No.15 On Windows there is the ColourSimulator App which allows you to simulate on your screen with a slidable window to inspect design or images to check if those are inclusive for color deficient vision. The #biovoxxel LUT Channels Tool provides a related functionality.

If you have no friends, but want to play Pictionary, now, you can!

Why #BigDataViewer loves multi-resolution (pyramidal) formats: - Top left: Only high-res data → slow & artifacts when zoomed out. - Top right: Only low-res data → no details when zoomed in. - Bottom: All resolutions → seamless, responsive, beautiful. 🎥 #FijiSc

😱📣 BlueSky-ers: WE NEED YOUR HELP!!! 🙏 All of you who ever liked a lecture of mine... All of you who liked one of the courses I teach in... All of you I work(ed) with in one way or another... All of you who see my desperation! 😜 PLEASE re-post! 🙏 careers.humantechnopole.it/o/postdoc-in...

Posts are to be called Skywriting and threads are to be called Skydives.

Since @markhamillofficial.bsky.social has joined Bluesky I think it totally appropriate to call ourselves Skywalkers instead of Twitterati

Small tip : There's even a Fiji plug-in to simulate colorblindness if you're not sure about your current LUT! 😉 imagej.net/plugins/simu...

🚀Thrilled to announce #inTRACKtive: a web-based tool for exploring massive cell-tracking datasets, no software installation required! Open your browser and dive into terabytes of developmental biology data 🐭🪰🪱🪲🐠 Preprint: biorxiv.org/content/10.1... Repository: github.com/royerlab/inT... 🧵1/n

In an effort to bring myself (and maybe others?) some joy while working through all the feels, I’m just gonna start sharing cool stuff in my camera roll from work like these bloody-belly comb jellies found only in the #deepsea & @montereyaq.bsky.social www.montereybayaquarium.org/animals/anim...

Fantastic resource for bio icons: NIH Bioart Source Build figures, presentations, and illustrations with 2,000+ science and medical art visuals. This collection of high-quality, scientifically accurate vectors, #icons, and brushes is freely available within the public domain. bioart.niaid.nih.gov

Last days to apply! Deadline is tomorrow