Assaf Zaritsky
@assafzaritsky.bsky.social
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Computational cell biologist
https://www.assafzaritsky.com/
reposted by
Assaf Zaritsky
Rita Strack
4 days ago
Nature Biomedical Engineering is hiring again! This time we're hoping to add an editor with machine learning expertise to the team (although we are open to those with other relevant expertise!) Deadline is Oct 20. Please RT!
springernature.wd3.myworkdayjobs.com/SpringerNatu...
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Assaf Zaritsky
Janelia Research Campus
about 1 month ago
📢We're
#hiring
Group Leaders! Apply to lead a lab at Janelia & advance biology using theory, computational modeling & machine learning. 🔹5-year renewable appointment 🔹Pioneer new tools & approaches 🔹Collaborate across disciplines Apply by Nov. 4👉
https://janelia.link/groupleader
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Assaf Zaritsky
Nicoletta Petridou
about 2 months ago
We are searching for an enthusiastic scientist to join our team and establish annual killifish as a model system for early developmental biology and biophysics!
@embl.org
@embldbunit.bsky.social
Apply here:
embl.wd103.myworkdayjobs.com/EMBL/job/Hei..
. Please re-post 🙏
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reposted by
Assaf Zaritsky
Allen Institute
3 months ago
How do organelles change over the course of a stem cell’s life? ADIs
@cohenlaboratory.bsky.social
,
@assafzaritsky.bsky.social
, and
@mattersoflight.bsky.social
are using ML and cell engineering to explore the
#FrontierScience
of stem cell differentiation.
alleninstitute.org/division/fro...
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Data-driven modeling of inter-organelle dynamic interactions throughout differentiation with multispectral and label free live imaging
With funding from the Allen Distinguished Investigators program, these investigators hypothesize that complex and dynamic patterns of organelle connection and communication are distinctive across diff...
https://alleninstitute.org/division/frontiers-group/distinguished-investigators/data-driven-modeling-of-inter-organelle-dynamic-interactions-throughout-differentiation-with-multispectral-and-label-free-live-imaging/
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Assaf Zaritsky
Peter O'Toole
3 months ago
BIG start to
#mmc2025
with Assaf Zaritsky giving an awesome opening plenary.
@royalmicrosoc.bsky.social
@eurobioimaging.bsky.social
@globias.bsky.social
@bioimaginguk.bsky.social
@globalbioimaging.bsky.social
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Super excited to share our new method: Context-dependent Identification of Spatial Motifs (CISM)! 🚀 A two-step approach for uncovering fine-scale intercellular modules associated with human disease states from single-cell spatial data.
doi.org/10.1101/2025...
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5 months ago
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reposted by
Assaf Zaritsky
Allen Institute
5 months ago
Unveiling crucial insights into nuclear growth in hiPSC colonies. By analyzing 3D timelapse data, our Cell Science team has shown how cell lineage & environment shape cellular behavior. This timelapse illuminates the height of nuclei from 4μm (turquoise) to 11μm (fuchsia). 🔗👇
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MBoC (
@ascbiology.bsky.social
Society Journal) is Looking for Early-Career Editorial Board Members!
www.ascb.org/society-news...
Submit your application by May 22, 2025!
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MBoC is Looking for Early-Career Editorial Board Members — Join Us! - ASCB
Are you a senior postdoc or early-career faculty member who’s passionate about publishing, peer review, and amplifying great science? We’d love for you to consider joining the Molecular Biology of the...
https://www.ascb.org/society-news/mboc-is-looking-for-early-career-editorial-board-members-join-us/
5 months ago
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Assaf Zaritsky
Dave Barry
5 months ago
"This symposium explores the power of microscopy imaging as a data-rich resource for quantifying cellular phenotypes, with a strong focus on high-content imaging techniques such as Cell Painting and their applications in drug discovery and basic cell biology"
cytodata25.eu-openscreen.eu
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Assaf Zaritsky
NFDI4BIOIMAGE
6 months ago
You want to use LLMs for your research, but don't know what they can be used for? And whether their use is compatible with good scientific practice? Then this introduction by
@haesleinhuepf.bsky.social
might be the right thing for you. Find the slides here:
zenodo.org/records/1441...
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Assaf Zaritsky
Paul Villoutreix
6 months ago
Very happy to share our new preprint "MODIS: Multi-Omics Data Integration for Small and Unpaired Datasets"! We proposed a new coupled variational auto-encoder architecture to solve the problem of data integration for small and unpaired datasets (diagonal integration)
arxiv.org/abs/2503.18856
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Hello, World!
6 months ago
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