✍ If you're having difficulty writing #BioimageAnalysis code that enables others to follow your workflow, have a look at @haesleinhuepf.bsky.socials slides on „Reproducible Bio-Image Analysis using Python, Napari, Jupyter and AI“ from the #EMBOlsm25. To the slides: 👉 doi.org/10.5281/zeno...

Our new collection offers cell biologists practical, expert-driven guidance and best practices in the design, execution, and analysis of experiments, and the subsequent communication of their results to their peers. 👉 rupress.org/jcb/collecti... #Reproducibility

Thrilled to announce that I'm back in Buenos Aires and open for image & data analysis projects! My focus is turning images from bioscience, ecology, & more into actionable data. I'm available for collaborations in Argentina and internationally. Check out my portfolio and contact: acorbat.github.io

Next one in the #GloBIAS seminar series: Behind the Scenes at SciLifeLab BIIF: Lessons from Managing a National Bioimage Analysis Support Unit. Presented by Anna Klemm, head of BioImage Informatics Infrastructure Unit, Uppsala University, Sweden Wednesday, 27th of August, 2pm CEST

We're happy to announce the 2025 International OME-NGFF workshop 🎉 📅 Dates: - Symposium: Nov 10–11, 2025 - Hackathon: Nov 12–14, 2025 📍 Location: Zurich, Switzerland Full details & registration: www.biovisioncenter.uzh.ch/en/events/Up...  #bioimaging #openscience #OMENGFF #OMEZarr (1/x 🧵)

Se extendió el deadline! Aprovechen para aplicar a este curso de análisis de imágenes 3D en Chile🔬. Todavía hay ayudas economicas para viajes🛩️! Más información en los links 👇...

Thanks to everyone in the #GloBIAS Survey 24 workgroup! Lots of work, fun, and sometimes a bit of time zone confusion. But we got there ;-)

📣El preprint de @globias.bsky.social esta disponible en arXiv! Fue un placer poder trabajar con un grupo internacionial en este proyecto!!! En el trabajo presentamos resultados de una encuesta indagando cuales son las necesidades de analistas de bioimagenes y como GloBIAS busca trabajar en ellas.

Second round of hashtag#GloBIAS Free Help (previously Call4Help) is happening in May. You can register for the sessions on our webpage: www.globias.org/activities/g... Registration deadline is 7. May 2025.

🚨Latin American Workshop Series🚨 The team from @bethcimini.bsky.social‘s lab at @broadinstitute.org and the Center for Open Bioimage Analysis will host three free online image analysis workshops for LATAM ... in SPANISH🇪🇸 and PORTUGUESE🇧🇷!!!🎉🎊 broad.io/latam_worksh... Deadline: April 23rd, 2025

🚀 We’re very excited to share our latest preprint on OME-Zarr! 🚀 Our report on the 2024 OME-NGFF Workflows Hackathon is a deep dive into the status of OME-Zarr and the great work that happened last November at the BioVisionCenter in Zurich. 🔗 Read the preprint: osf.io/preprints/bi... 🧵 (1/15)

Truly proud of everyone at QUAREP LiMi WG11. We defined “bare-minimal” guidelines for microscopy reporting to improve reproducibility in light microscopy. Check out our Zenodo upload! zenodo.org/records/1497.... Thank you all who contributed! Our comprehensive guidelines will come next!

At this week's #VirtualPub, we welcome Jim Swoger, @embl.org in Barcelona, on "Cell 3D Positioning by Optical Encoding (C3PO) and its application to spatial transcriptomics." Join us! 🗓️ Friday, March 14 @ 13:00 CET Register 🔽 buff.ly/gcvGlV8

a prerelease web page for the GloBIAS 2025 conference in Kobe, Japan: bioimaging.riken.jp/globias2025/ Keep your dates! Oct 26 - Oct 31, 2025

🚨 Save the Date! 🚨 AI4Life & @globias.bsky.social are hosting a 4-part webinar series to showcase AI4Life services and lessons learned. 📅 When: Feb 13, Apr 10, Jun 12, Aug 14 🖥️ How: Online | 🎥 Recorded 🔗 Registration: bit.ly/registration...

Applications for our Quantitative Imaging: From Acquisition to Analysis 2025 course (Mar 24-Apr 8) are due on Jan 31! Come immerse yourself in microscopy and image analysis with me, @talleylambert.bsky.social, @bethcimini.bsky.social, @florianjug.bsky.social & Hunter Elliott! Please RT

We are looking for our next cohort of #FocalPlaneCorrespondents! If you are interested in getting some #scicomm experience alongside your research, check out our call and drop us an email if you have any questions. Deadline for applications: 20 January 2025

GloBIAS organizo un evento piloto de Call 4 Help! Si necesitas ayuda en 🔬 analisis de imagenes para tu proyecto no dudes en aplicar!

🚀 We're hiring! Join the German BioImaging Team as a Software Developer! 💻 Build scalable #bioimaging solutions 🌍 Collaborate globally 🎯 Contribute to open science through #OMEZarr @openmicroscopy.org Remote, full-time. Apply by 31 Jan 2025: bit.ly/3Zrd4SR

Do you want to go from Microscope user to microscopist?

Esta abierto el llamado a Programas de Formación Y Desarrollo Profesional en Bioimaging de @latambioimaging.bsky.social. Consiste en ayudas de viaje para asistir a cursos de Bioimaging y para el desarrollo profesional y conexión de Imaging Facilities de latinoamérica. labi.lat/activities/

Biologist, stop putting UMAP plots in papers! Blogpost here: simplystatistics.org/posts/2024-1...

📣 Many #EuroBioImaging Nodes, facilities & friends are on BlueSky🦋! Here are some to follow 🔽 @bioimaginguk.bsky.social @france-bioimaging.bsky.social @danishbioimaging.bsky.social @sln-icfo.bsky.social Don't miss the starter pack 🔽 go.bsky.app/VoeAfuN Join us - Nominate yourself or reply here!

Necesitas ayuda con analisis de imagenes, desde @globias.bsky.social vamos a ofrecer sesiones de Call4Help. En la encuesta podes llenar si necesitas que la sesion sea en otro idioma y que herramienta preferis (Napari, Ilastik, Fiji, CellProfiler, etc). docs.google.com/forms/d/e/1F...

The Swedish Bioinformatics Advisory Program is open for applications! I really like the concept of experts in bioinformatics giving advice and support to PhD students in groups that might not have bioinformatic experts within. 🧵 @scilifelab.se www.scilifelab.se/training/the...

I had the same personal experience! It's probably quite ubiquitous...

I made a BioImage Analysts Starter pack. Reachout if you're missing on it 🔬💻🌐 go.bsky.app/2hPEBDu

Happy #MicroscopyMonday! The recordings of the #Virtual #I2K2024 workshops are available now tinyurl.com/VirtualI2K20... Thanks to all who presented! Please re-share! 2022 and 2023 content available too: www.youtube.com/@I2KConference

Spatially clustering with @acorbat.bsky.social for the Crick BioImage Analysis Symposium #CBIAS2024