Steven Burgess
@sjb287.bsky.social
๐ค 1382
๐ฅ 427
๐ 128
Assistant Professor UIUC, plant biology, evolution
#synbio
#photosynthesis
#plantscience
Interesting read -10.1093/plphys/kiaf465 "Allelic variants of IRKI contribute to photosynthetic efficiency by regulating rubisco activase in Populus" there is a lot we don't know about regulation of photosynthesis here a receptor like kinase interacting protein has a role
@plantphys.bsky.social
1 day ago
0
1
0
reposted by
Steven Burgess
Lancaster Plant Biology
4 days ago
New
#PhD
opportunities! NorthWestBio projects now online for 2026! Including a
#photosynthesis
project w/
@marjorielundgren.bsky.social
looking at how photosynthetic diversity may affect future crop nutrient quality. Plant projects and the full set of projects available here:
tinyurl.com/529yz4jd
loading . . .
FindAPhD : NorthWestBio Fully Funded Doctoral Training Programme Studentship 2026 at University of Glasgow
Apply for a PhD: NorthWestBio Fully Funded Doctoral Training Programme Studentship 2026 at University of Glasgow
https://tinyurl.com/529yz4jd
0
3
7
reposted by
Steven Burgess
Ben Long
7 days ago
We really enjoyed putting together this Darwin Review for JXB. Fun to think about how carboxysomes work and why plants don't have them.
@jxbotany.bsky.social
Function, Evolution, and Future of Carboxysomes url:
academic.oup.com/jxb/article-...
loading . . .
The Function, Evolution, and Future of Carboxysomes
Abstract. Since their discovery as rubisco-containing compartments more than 50 years ago, significant breakthroughs have advanced our understanding of car
https://academic.oup.com/jxb/article-abstract/doi/10.1093/jxb/eraf425/8266333
1
17
10
reposted by
Steven Burgess
Xinyou Yin
22 days ago
Just came across this paper "Dual-cycle CO2 fixation enhances growth and lipid synthesis..."
www.science.org/doi/10.1126/...
loading . . .
Dual-cycle CO2 fixation enhances growth and lipid synthesis in Arabidopsis thaliana
Carbon fixation through the Calvin-Benson-Bassham (CBB) cycle accounts for the majority of carbon dioxide (CO2) uptake from the atmosphere. The CBB cycle generates C3 carbohydrates but is inefficient ...
https://www.science.org/doi/10.1126/science.adp3528
0
2
1
I'm deeply saddened. A tireless champion of plant
#synbio
and man of integrity. His insistence on focusing on real-world problems, calling out BS and bringing together lab and Ag, industry and academia will be sorely missed
add a skeleton here at some point
29 days ago
0
1
1
We are hiring! The
#PlantBio
department at UIUC is looking to recruit an Assistant Professor in Plant-Fungal interactions. Application deadline is October 31st
@dallingjim.bsky.social
see the link below for more details:
illinois.csod.com/ux/ats/caree...
loading . . .
Assistant Professor- Department of Plant Biology
Duties & Responsibilities
https://illinois.csod.com/ux/ats/careersite/1/home/requisition/14759?c=illinois&sq=1031975&referralToken=MX8lYTz4-EapwaM-jNL-bA
30 days ago
1
10
19
reposted by
Steven Burgess
Gozde Demirer
about 1 month ago
Big news from the Demirer lab: first 4 research papers are preprinted! Check them out, feedback welcomed: eCIS for plant protein delivery:
tinyurl.com/mrx4d878
R2 for targeted insertion:
tinyurl.com/5n73za6h
Transient expression:
tinyurl.com/38p2ud6w
Chemotaxis assay:
tinyurl.com/3nw9haes
More โฌ๏ธ
2
13
10
reposted by
Steven Burgess
Lars รstergaard
about 1 month ago
๐
my.corehr.com/pls/uoxrecru...
Join us and be part of shaping the future of
#plantscience
at Oxford as we move to the new Life and Mind Building
lifeandmind.web.ox.ac.uk/home
(recognised for its potential to change the World
edition.cnn.com/2025/01/01/s...
)
@biology.ox.ac.uk
www.biology.ox.ac.uk
loading . . .
'
https://my.corehr.com/pls/uoxrecruit/erq_jobspec_version_4.jobspec?p_id=180329
1
42
45
reposted by
Steven Burgess
Sandy Hetherington
about 1 month ago
A great example of how comparative genomics across the full range of vascular plant lineages can be used as a catalyst for gene discovery! Exciting new single cell datasets for gymnosperms, ferns and lycophytes! The scale of this study is really amazing!
www.cell.com/cell/fulltex...
loading . . .
A unified cell atlas of vascular plants reveals cell-type foundational genes and accelerates gene discovery
A cross-species single-cell atlas highlights a core subset of cell-type foundational genes associated with major vascular plant cell types, enabling the identification of hidden cell types and the dev...
https://www.cell.com/cell/fulltext/S0092-8674(25)00858-X?rss=yes
0
78
33
www.nature.com/articles/s41...
loading . . .
Assembly-dependent translational feedback regulation of photosynthetic proteins in land plants - Nature Plants
Algae fine-tune protein synthesis to assembly demands of photosynthetic complexes. In land plants, this feedback control is conserved in Rubisco and partly in photosystem II, but varies or is absent i...
https://www.nature.com/articles/s41477-025-02074-x
about 1 month ago
0
2
0
reposted by
Steven Burgess
Mary Williams @PlantTeaching
about 2 months ago
#PlantScience
add a skeleton here at some point
0
16
10
reposted by
Steven Burgess
้ตๅจ (Min Ya; Minya) PhD
about 2 months ago
Iโm proud to present the main work from my postdoc, 3+ years in making from scratch, my ultimate
#MimulusPropaganda
up till now: The Moment That Symmetry Breaks.
#plantscience
#development
#imaging
#microscopy
๐งช๐ธ๐ฌ w. Captain Yaowu &
@biancatash.bsky.social
www.biorxiv.org/content/10.1...
loading . . .
14
204
64
reposted by
Steven Burgess
Liana Lareau
about 2 months ago
This preprint from Helen Sakharova is one of the coolest things to come out of my lab: โProtein language models reveal evolutionary constraints on synonymous codon choice.โ Codon choice is a big puzzle in how information is encoded in genomes, and we have a new angle.
www.biorxiv.org/content/10.1...
loading . . .
Protein language models reveal evolutionary constraints on synonymous codon choice
Evolution has shaped the genetic code, with subtle pressures leading to preferences for some synonymous codons over others. Codons are translated at different speeds by the ribosome, imposing constrai...
https://www.biorxiv.org/content/10.1101/2025.08.05.668603
6
214
87
reposted by
Steven Burgess
Conor McClune
about 2 months ago
A truly enabling new approach by
@taralowensohn.bsky.social
Will Cody and
@sattelylab.bsky.social
to probe plant genetics at scale. Single-gene-per-cell delivery coupled to an effective transcriptional selection system
www.biorxiv.org/content/10.1...
1
20
14
reposted by
Steven Burgess
Elisabeth Bik - Perpetrator 5, a fraudulent microbiologist
2 months ago
Fantastic new paper by
@reeserichardson.bsky.social
et al. An enormous amount of work showing the extent of coordinated scientific fraud and involvement of some editors. The number of fraudulent publications grows at a rate far outpacing that of legitimate science.
www.pnas.org/doi/10.1073/...
add a skeleton here at some point
6
134
63
reposted by
Steven Burgess
Johnathan Napier
2 months ago
Great to see our collaborative study with Ed Cahoon and colleagues on the front cover of PBJ, describing our successful efforts to engineer the accumulation of astaxanthin in GM camelina seeds. Astaxanthin is a ketocarotenoid that is a powerful antioxidant & used in aquaculture feeds as a pigment.
0
3
2
reposted by
Steven Burgess
Mary Williams @PlantTeaching
2 months ago
Lots of talk about teaching yesterday at
#PlantBio2025
. A few resources that might be useful. 1) From LUCA to Lily: 12 perspectives for teaching about plants
blog.aspb.org/from-luca-to...
loading . . .
From LUCA to Lily: 12 perspectives for teaching about plants | Plant Science Today
The other day I was talking to a friend about the need to demystify plants, so that teachers feel as confident in their teaching of plant biology as they do about animal biology. I wonder if sometimes...
https://blog.aspb.org/from-luca-to-lily-12-perspectives-for-teaching-about-plants/
1
20
8
reposted by
Steven Burgess
Mary Williams @PlantTeaching
2 months ago
This is a great program. We started in in 2016 and it just gets better and better! Check out some past fellows who are on Bluesky:
@philcarella.bsky.social
@mattbnt.bsky.social
@psaima.bsky.social
@fromani.bsky.social
@sjb287.bsky.social
@aribidopsis.bsky.social
@cavycavs.bsky.social
add a skeleton here at some point
1
29
15
reposted by
Steven Burgess
Maciek Wiatrak
2 months ago
๐ฅ Excited to introduce Bacformer ๐ฆ - the first foundation model for bacterial genomics. Bacformer represents genomes as sequences of ordered proteins, learning the โgrammarโ of how genes are arranged, interact and evolve. Preprint ๐:
biorxiv.org/content/10.1...
๐งต 1/n
3
91
61
reposted by
Steven Burgess
The Arabidopsis Information Resource (TAIR)
2 months ago
"Postdoctoral Researcher in Organelle Synthe4c Biology at UC Riverside, Riverside, CA, USA" Read more here:
https://arabidopsis.org/news/jobs/view?file=Yu_7-21-25.pdf
#PlantSciJobs
0
1
3
reposted by
Steven Burgess
Antony Dodd
3 months ago
Two amazing opportunities at the
@johninnescentre.bsky.social
add a skeleton here at some point
0
8
8
reposted by
Steven Burgess
Karas Lab
3 months ago
0
3
2
www.nature.com/articles/s41...
loading . . .
Guard cells on the adaxial and abaxial leaf surfaces use different compositions of potassium ion channels to drive light-induced stomatal opening - Nature Plants
This study combines single-cell RNA sequencing, in silico OnGuard simulation and genetic modification approaches to reveal distinct compositional differences in the potassium ion channel between adaxi...
https://www.nature.com/articles/s41477-025-02026-5
3 months ago
0
8
5
reposted by
Steven Burgess
Prof Ros Gleadow FAA
3 months ago
My department has open positions at Level B (Lecturer) or Level C (Senior Lecturer), - one position in Genomics and two in Ecology.
#PlantSciJobs
Applications close on Thursday 7 August Aussie time
careers.pageuppeople.com/513/cw/en/jo...
careers.pageuppeople.com/513/cw/en/jo...
loading . . .
Job Search
https://careers.pageuppeople.com/513/cw/en/job/679703/senior-lecturer-lecturer-in-genomics
0
19
23
reposted by
Steven Burgess
Ben Long
3 months ago
A perspective: some relationships between the biochemistry of photosynthesis and the gas exchange of leaves (Planta 153, 376โ387)
link.springer.com/article/10.1...
loading . . .
A perspective: some relationships between the biochemistry of photosynthesis and the gas exchange of leaves (Planta 153, 376โ387) - Planta
The Planta paper โSome relationships between the biochemistry of photosynthesis and the gas exchange of leavesโ explored the relationship between gas exchange measurements of CO2 assimilation rate and...
https://link.springer.com/article/10.1007/s00425-025-04761-7
0
15
7
reposted by
Steven Burgess
Mark A. Hanson
3 months ago
The "reproducibility crisis" in science constantly makes headlines. Repro efforts are often limited. What if you could assess reproducibility of an entire field? That's what
@brunolemaitre.bsky.social
et al. have done. Fly immunity is highly replicable & offers lessons for
#metascience
A ๐งต 1/n
10
319
190
reposted by
Steven Burgess
Graham Coop
3 months ago
Looking for investors in my CRISPR company recreating the golden ram. Relive the days of Jason and the argonauts. Come get fleeced!
4
187
36
reposted by
Steven Burgess
Joel Sharbrough
3 months ago
Please RT! I'm hiring a postdoc to work in my new lab at UCSB (!) on an NSF-funded project investigating the phenotypic consequences of WGD for photosynthesis and respiration. Check out the full posting here:
recruit.ap.ucsb.edu/JPF02986
And more info about the lab here:
sharbroughlab.com
0
20
31
Nice work showing it is possible to engineer increased oxygen tolerance of fast rubiscos using in vivo directed evolution via
@pnas.org
doi.org/10.1073/pnas...
loading . . .
In vivo directed evolution of an ultrafast Rubisco from a semianaerobic environment imparts oxygen resistance | PNAS
Carbon dioxide (CO2) assimilation by the enzyme Ribulose-1,5-bisphosphate Carboxylase/Oxygenase (Rubisco) underpins biomass accumulation in photosy...
https://doi.org/10.1073/pnas.2505083122
3 months ago
0
8
2
reposted by
Steven Burgess
noam
3 months ago
Specificity is still really tricky, the underlying mechanism remains almost entirely unexplained and red algal assembly is not yet understood (as you point out). But the field is moving quickly!
0
3
1
reposted by
Steven Burgess
Laura Gunn
3 months ago
While we don't know how to assemble Griffithsia Rubisco yet, this expansion in SynBio capabilities (from Archer and friends) are very exciting - the high throughput engineering capabilities that they enable definitely bring us substantially closer to engineering higher specificity Rubisco.
0
2
1
Further advanced in synbio systems for expression of plant rubiscos in E. coli, exploring importance of Raf1 variants:
academic.oup.com/jxb/article-...
and accompanying perspective via
@jxbotany.bsky.social
doi.org/10.1093/jxb/...
loading . . .
Effects of chaperone selectivity on the assembly of plant Rubisco orthologs in E. coli
We used an E. coli system to examine recognition of plant Rubisco chaperones for different Rubiscos. Identified factors influencing chaperone selectivity e
https://academic.oup.com/jxb/article-abstract/76/10/2809/8101346?redirectedFrom=fulltext
3 months ago
2
17
9
New from the Stern lab, KO of both rubisco activase isoforms in setaria. Beta necessary despite C4 pump, but role of heat inducible alpha remains enigmatic
@jxbotany.bsky.social
doi.org/10.1093/jxb/...
loading . . .
The ฮฑ form of Rubisco Activase supports photosynthesis during heat stress in the absence of the ฮฒ form in Setaria viridis
Abstract. Rubisco activase (RCA) facilitates the removal of inhibitors from the Rubisco active site and is essential for plant growth at atmospheric CO2. H
https://doi.org/10.1093/jxb/eraf289
3 months ago
0
11
3
Seen a number of groups working on this, but impressive work to produce transgene free heritable genome editing that avoids tissue culture in monocots. Importantly has potential for a range of species
www.nature.com/articles/s41...
loading . . .
Transgene- and tissue culture-free heritable genome editing using RNA virus-based delivery in wheat - Nature Plants
Efficient delivery systems are urgently needed for genome editing in monocot plants. Here, this study develops a system of virus-induced genome editing in tillers (ViGET) to achieve heritable editing ...
https://www.nature.com/articles/s41477-025-02023-8
3 months ago
0
19
7
Cool preprint - what is the boundary between virus and life? Following the recent discovery of the nitroplast there are lots of interesting things to be discovered in marine microbe communities
www.biorxiv.org/content/10.1...
loading . . .
A cellular entity retaining only its replicative core: Hidden archaeal lineage with an ultra-reduced genome
Defining the minimal genetic requirements for cellular life remains a fundamental question in biology. Genomic exploration continually reveals novel microbial lineages, often exhibiting extreme genome...
https://www.biorxiv.org/content/10.1101/2025.05.02.651781v1
3 months ago
0
6
1
reposted by
Steven Burgess
Max Planck Institute of Molecular Plant Physiology ๐ฑ๐งช
5 months ago
New research by
@egonzalezduran.bsky.social
shows that DSB repair suppresses gene transfer from chloroplasts to nucleus. With DSB repair impaired, transfer rates jump 20ร โ revealing how plants protect genome stability, with lessons beyond plant biology. Read:
nature.com/articles/s41477-025-02005-w
loading . . .
Suppression of plastid-to-nucleus gene transfer by DNA double-strand break repair - Nature Plants
Inactivation of double-strand break repair pathways greatly increases the integration of plastid DNA into the nuclear genome of tobacco plants, highlighting the mutagenic potential of organellar DNA a...
https://nature.com/articles/s41477-025-02005-w
1
20
15
reposted by
Steven Burgess
Sternberg Lab
5 months ago
1/10 Today in
@science.org
in collaboration with the Liu group we report the development of a laboratory-evolved CRISPR-associated transposase (evoCAST) that supports therapeutically relevant levels of RNA-programmable gene insertion in human cells.
drive.google.com/file/d/1I-Ub...
2
132
64
reposted by
Steven Burgess
Sophien Kamoun
5 months ago
Tweeps, please spread the word. We're still looking at recruiting a structural biologist (any level) to study plant-pathogen protein complexes especially in the context of coevolution. Direct inquiries welcome. Please include a cover letter. Applicant from US welcome?
medium.com/@kamounlab/2...
2
35
64
This semester my class has been learning to review papers during discussion sections, the final assignment was to produce constructive reviewer reports using a preprint which included
#genetics
and or
#genomics
in
#plantsci
. Impressed with the outcomes, I will be posting the results 1/n
5 months ago
2
10
1
www.nsf.gov/policies/doc...
all new NSF grants to have 15% IDC.
loading . . .
Policy Notice: Implementation of Standard 15% Indirect Cost Rate
https://www.nsf.gov/policies/document/indirect-cost-rate
5 months ago
1
0
0
reposted by
Steven Burgess
Doug Orr
5 months ago
Just over a week left to apply for a 3yr postdoc with me at Lancaster
@lancasterplantbio.bsky.social
looking at Rubisco engineering in vitro and in vivo to improve plant
#photosynthesis
#plantscijobs
wp.lancs.ac.uk/lancsphotosy...
loading . . .
Making the most of sunshine
Photosynthesis Research at the Lancaster Environment Centre
https://wp.lancs.ac.uk/lancsphotosynthesis/
0
8
8
reposted by
Steven Burgess
Steve Jacobsen
5 months ago
Our paper is just out
www.nature.com/articles/s41...
from the Jacobsen, Doudna, and Banfield labs on viral delivery of a tiny CRISPR system for transgene free germline editing in plants,
tinyurl.com/3k223r3x
. Looking for postdocs to join the team for the next phase of this work!
loading . . .
Viral delivery of an RNA-guided genome editor for transgene-free germline editing in Arabidopsis - Nature Plants
Weiss et al. engineered the tobacco rattle virus to express the RNA-guided TnpB enzyme ISYmu1 and guide RNA for transgene-free germline editing in Arabidopsis thaliana.
https://www.nature.com/articles/s41477-025-01989-9
0
38
17
reposted by
Steven Burgess
Marc Somssich
5 months ago
Following up on my Lysenkoism post (
bsky.app/profile/soms...
), hereโs another Russian plant biologist worth knowing: Have a look at this thread on ๐ ๐ถ๐ธ๐ต๐ฎ๐ถ๐น ๐๐ต๐ฟ๐ถ๐๐๐ผ๐ณ๐ผ๐ฟ๐ผ๐๐ถ๐ฐ๐ต ๐๐ต๐ฎ๐ถ๐น๐ฎ๐ธ๐ต๐๐ฎ๐ป (1902โ1991), who proposed the existence of a mobile, leaf-derived flowering factor, long before FT.
#PlantScience
๐งต ๐
1
24
9
reposted by
Steven Burgess
Charlie Hale
5 months ago
New preprint from my PhD! How cis-regulatory evolution shaped grass diversification worldwide
www.biorxiv.org/content/10.1...
We looked across 589 (!) grass species to ask: โ What regulatory changes enabled grasses to adapt? โ How can this inform crop breeding for resilience? Hereโs what we found:
loading . . .
Extensive modulation of a conserved cis-regulatory code across 589 grass species
The growing availability of genomes from non-model organisms offers new opportunities to identify functional loci underlying trait variation through comparative genomics. While cis-regulatory regions ...
https://www.biorxiv.org/content/10.1101/2025.04.23.650228v1
4
41
20
reposted by
Steven Burgess
Glen O'Hara
5 months ago
We are now approaching 4,000 formally announced university redundancies in the UK since January alone. The real situation is far worse than that, and will also accelerate going forwards.
www.timeshighereducation.com/news/uk-univ...
loading . . .
UK university redundancies: latest updates
As higher education institutions shed thousands of jobs, we track developments and bring together latest analysis with resources for affected staff and students
https://www.timeshighereducation.com/news/uk-university-redundancies-latest-updates
2
129
135
reposted by
Steven Burgess
Mary Feeney
5 months ago
For the last 3 yrs, I was the director for the Science of Science program at the NSF. We funded projects on science communication - science communication to the public, communication of public priorities to scientists, citizens engagement & participation in science. ๐งต
15
981
482
reposted by
Steven Burgess
bioRxiv Plant Bio
5 months ago
High throughput screen of NPQ in sorghum shows highly polygenic architecture of photoprotection
https://www.biorxiv.org/content/10.1101/2025.04.18.649521v1
0
0
1
reposted by
Steven Burgess
Brady Lab
6 months ago
We have a postdoc position that just opened up in the Brady lab on reprogramming tomato root system architecture in response to changes in nutrient availability - please consider applying!
recruit.ucdavis.edu/JPF07095
loading . . .
Postdoctoral Researcher- Brady Lab
University of California, Davis is hiring. Apply now!
https://recruit.ucdavis.edu/JPF07095
1
96
111
For anyone doing
#photosynthesis
gas exchange analysis, I can't recommend the new R package PhotoGEA highly enough for data processing. Comes with excellent guide to use and considerations, QC analysis. Great for students Paper:
doi.org/10.1111/pce....
Website:
eloch216.github.io/PhotoGEA/
loading . . .
Photosynthetic Gas Exchange Analysis
Read, process, fit, and analyze photosynthetic gas exchange measurements. Documentation is provided by several vignettes; also see Lochocki, Salesse-Smith, & McGrath (2025) <doi:10.1111/pce.15501>.
https://eloch216.github.io/PhotoGEA/
6 months ago
0
9
2
reposted by
Steven Burgess
Plantae.org
6 months ago
#JustIn
on Plantae: From Academia to Industry: Expert Advice from Industry Veterans Who Made The Leap. In this new piece, ASPB Plantae Fellows Aditi Bhat and Stephanie Temnyk feature an interview with two industry folks about the transition from academia to industry.
buff.ly/f2mlKwV
#plantscience
loading . . .
From Academia to Industry: Expert Advice from Industry Veterans Who Made The Leap | Plantae
It is the age-old question for an early-career scientist: should I pursue a path in academia or industry?
https://buff.ly/f2mlKwV
0
12
5
Load more
feeds!
log in