🥁 We haven't run in-person mixOmics workshops for a while! Come and join us to get hands on with omics data integration 📍 22–24 Sept 2025, Lund University 🎟️ Rego closes 12 Sept (limited spots) ➡️ mixomics.org/2025/08/mixo... #mixOmics #RStats #omics

⚡️Thrilled that #VirtualLab is published in @nature.com! www.nature.com/articles/s41... We created a team of AI agents to mirror my Stanford lab 🤖. Led by a PI agent, the AI scientists ran their own group meetings and discovered effective binders to new CoVID variants that we validated.

The new version of MetaPhlAn v4.2.2 released! 📌taxonomic profiling of long-read metagenomes for the first time 📌new version of the MetaPhlAn db (vJan25_202503) containing >21k new SGBs Try it out & @hutlab.bsky.social and we are looking forward to your feedback! forum.biobakery.org/t/metaphlan-...

If you have ever wondered what might happen to short chain fatty acids made by the microbiome. Here is a large class of metabolites and how they link to biology. www.cell.com/cell/fulltex...

OPEN CALL for PhD positions in our lab through the semm_it program: 1️⃣ Microbiome signatures of early on-set colorectal cancer 2️⃣ High-resolution computational metagenomics for the study of human microbiome transmission More info: www.semm.it/education/op... Apply by June 9!

El equipo de Salud Entre Culturas protagonizó ayer la sesión general en el salón de actos del Hospital Ramón y Cajal. Lo hizo explicando el Servicio de Interpretación y Mediación Intercultural como modelo de éxito @saludentreculturas.bsky.social www.saludentreculturas.es

🧵No os perdáis las novedades presentadas en seimc2025.org 📍#SEIMC2025 arranca con fuerza 💪 Aquí un hilo con nuestras aportaciones 👇

Don't forget to come and chat to us about our poster on the diagnostic value of CT-guided biopsy for spondylodiscitis! #ESCMIDGlobal #IDSky #MedID @infecciosasryc.bsky.social

🧵 Nuevo hilo de ciencia sobre VIH, ofrecido ofrecido por Elena Moreno del Olmo, del Instituto Ramón y Cajal de Investigación Sanitaria (IRYCIS): Differential systemic immune-inflammation index levels in people with and without HIV infection ➡️ journals.lww.com/aidsonline/a...

🥁 NEW @vheidrich.bsky.social @mireiavallesc.bsky.social and Nicola Segata described the state-of-the-art of human microbiome transmission, including approaches and challenges associated with microbiome transmission analysis!

🧵 ¡Nuevo hilo de ciencia sobre #VIH! Ofrecido por Elena Moreno del Olmo, del Instituto Ramón y Cajal de Investigación Sanitaria: Fecal microbiota transplantation alters the proteomic landscape of inflammation in HIV: identifying bacterial drivers ➡️ microbiomejournal.biomedcentral.com/articles/10....

🧵 Llega un nuevo hilo de ciencia sobre VIH, ofrecido por Elena Moreno del Olmo, del Instituto Ramón y Cajal de Investigación Sanitaria (IRYCIS): 'Dynamics of the blood plasma proteome during hyperacute HIV-1 infection' ➡️ www.nature.com/articles/s41...

🧵 Llega nuevo hilo de ciencia, ofrecido por Elena Moreno del Olmo, del Instituto Ramón y Cajal de Investigación Sanitaria (IRYCIS): Cervical dysplasia in women with HIV in the modern treat-all era: Elevated risk remains despite long-term ART and normal CD4 count ➡️ journals.lww.com/aidsonline/a...

Jawdropping. You would expect this in a dictatorship, not the United States. This country is unrecognizable.

The projected cuts to PEPFAR and USAID will result in thousands of aviodable deaths world-wide. The US has led the world in helping the vulnerable under both Republican and Democratic leadership. Please write your elected leaders to support PEPFAR and USAID. 5CALLS.org makes it easy.

I just wrote a piece on why I think the chatter about AI putting programmers out of work is wrong. Every time it gets easier to tell computers what we want them to do, it brings more people into the fold and unleashes a wave of creativity and creative destruction. That reads like opportunity to me.

Fecal microbiota transplantation alters the proteomic landscape of inflammation in HIV: identifying bacterial drivers By @cladigar.bsky.social Full paper here: microbiomejournal.biomedcentral.com/articles/10.... 3/3

Thanks @cladigar.bsky.social for a great talk and sharing your findings!

TODAY: We are looking forward to discussing with you the latest #microbiome findings! Jon us here cassyni.com/s/mvif-35

This week I received a very nice cold email (sharing it w/😀's permission) 😀asked: What does your daily work involve? What skills do you think are most important ... to pursue this path? What do you enjoy most about your work as a microbiome scientist? What would you answer?

We've completed a 3-year field study on scientific poster design. But poster science doesn't really fit into an established journal. This is why I started my own journal with @Curvenote.com. Niche research, published for impact, with public peer review.

Freshly landed here, my first sci-bluesky-tutorial! We just published this study in #Microbiome 📢The microbiome is a potential therapeutic target to mitigate inflammation-related complications in people with #HIV 📜Article doi.org/10.1186/s401... 📺Video abstract youtube.com/watch?v=RxZe...

🥁 New Publication Alert: Our manuscript on the ☕️ and #microbiome relationship is out in #NatureMicrobiology: www.nature.com/articles/s41... 1/12

Habría que reformular por completo cómo enseñamos estadística. Lo ideal sería empezar por enseñar lo que son las regresiones, y a partir de allí enseñar el resto de técnicas o pruebas estadísticas y explicar cómo todas son simples modelos de regresión.

That's a wrap for #MVIF #33 in Atlantic zone THANK YOU to #microbiome people who tuned in & all the amazing speakers! 📢 you can submit your work for January and February 2025 www.microbiome-vif.org/en-US/-/info... 1/2

NEW #microbiomedigest (founded by @elisabethbik.bsky.social): microbiomedigest.com/2024/11/08/n... • community conservatism • gut-vitiligo • pre/probiotics & more new #microbiome studies! Plus, @microbiomevif.bsky.social invites you to join NEXT WEEK #MVIF! Happy Friday 👋