Kate Thomson
@k-jt.bsky.social
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NHS Clinical Scientist. Inherited cardiac conditions. Genomics in healthcare. Oxford.
reposted by
Kate Thomson
European Society of Human Genetics
3 months ago
Episode 4 of the ESHG Webinar Series is now available on YouTube! Kaitlin Samocha discusses how population data can improve variant interpretation, with a focus on rare disease. 📺 Watch the recording:
youtu.be/pWhienkM6L4?...
#Genomics
#RareDisease
#VariantInterpretation
#ESHG
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https://youtu.be/pWhienkM6L4?si=LGFoZS-Pgij2B5Yc
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Kate Thomson
Mike Hubank
3 months ago
I'm not against preventative screening, if done appropriately, but all this money for preemptive WGS at a time when our budget for
#genomic
testing patients *who actually have a disease* is being cut by 10%? Explain that to me someone.
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Kate Thomson
Anneke Lucassen
3 months ago
Evaluation of generation study (newborn genomes ‘pilot’) not yet done, so why announce it’s being rolled out to all babies?? We tried to make sense of issues involved
cpm.ox.ac.uk/wp-content/u...
and
cpm.ox.ac.uk/event/newbor...
led by excellent
@rachel-horton.bsky.social
@cpmoxford.bsky.social
add a skeleton here at some point
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Kate Thomson
The Heart Hive
4 months ago
We want to learn more about the genetics of cardiomyopathy. Are you over 18, in the UK and interested in taking part in research? Go to
thehearthive.org
to learn more about the Heart Hive Cardiomyopathy Study.
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Kate Thomson
Jodie Ingles
5 months ago
Our paper now published! 🙌🏻🧬🫀
@alexbutters25.bsky.social
@k-jt.bsky.social
@njhenden.bsky.social
@dgmacarthur.bsky.social
@kathrynmcgurk.bsky.social
@jamesware.bsky.social
@sharday-penn.bsky.social
@rdbagnall.bsky.social
@garvaninstitute.bsky.social
@escardio.bsky.social
doi.org/10.1093/eurh...
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A rare splice-site variant in TNNT2: the need for ancestral diversity in genomic reference data sets
Inherited cardiomyopathies, including hypertrophic (HCM), dilated (DCM), and restrictive (RCM) cardiomyopathies affect ∼1 in 200–500 in the population. Gen
https://doi.org/10.1093/eurheartj/ehaf001
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reposted by
Kate Thomson
Chai Ann Ng
6 months ago
I am pleased to share this
@ahajournals.bsky.social
CircGen paper. It is a team effort. I hope we have provided valuable insights on how KCNH2 variant that alters splicing and causes a large in-frame deletion can lead to a dominant negative effect of Kv11.1 K+
#ionchannel
function.
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Combined RNA Splicing and Patch-Clamp Analysis Reveal Pathogenicity of Splice-Altering Variants in KCNH2-Related LQTS | Circulation: Genomic and Precision Medicine
https://www.ahajournals.org/doi/10.1161/CIRCGEN.124.004966
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Kate Thomson
Nicky Whiffin
6 months ago
I am giving an online webinar in an hour for
@eshg.bsky.social
, if anyone is interested and free 👇
add a skeleton here at some point
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Kate Thomson
Andrew Glazer
6 months ago
🧵 I’m excited to share our latest preprint! We studied 252 SCN5A variants found in patients with Brugada Syndrome by automated patch clamp. [1/7]
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Kate Thomson
Daniel MacArthur
7 months ago
New preprint! We worked with
@msftresearch.bsky.social
and
@broadinstitute.org
to see whether large language models (LLMs) can be useful to variant scientists in deciding whether genetic variants seen in a patient are responsible for their disease. tl;dr yes they can:
www.biorxiv.org/content/10.1...
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Evidence Aggregator: AI reasoning applied to rare disease diagnostics
Retrieving, reviewing, and synthesizing technical information can be time-consuming and challenging, particularly when requiring specialized expertise, as is the case of variant assessment for rare di...
https://www.biorxiv.org/content/10.1101/2025.03.10.642480v1
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Kate Thomson
Jodie Ingles
7 months ago
Let me tell you a story about 2 patients we identified, both with a rare variant in TNNT2; NM_001001430.3: c.571-1G>A. Both had cardiac phenotypes and both had Oceanian ancestry Our latest in EHJ!
@alexbutters25.bsky.social
@escardio.bsky.social
#medsky
#genechat
#cardiosky
doi.org/10.1093/eurh...
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A rare splice-site variant in TNNT2: the need for ancestral diversity in genomic reference data sets
Inherited cardiomyopathies, including hypertrophic (HCM), dilated (DCM), and restrictive (RCM) cardiomyopathies affect ∼1 in 200–500 in the population. Gen
https://doi.org/10.1093/eurheartj/ehaf001
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Kate Thomson
Jodie Ingles
7 months ago
Q: How many genes should be tested for patients with hypertrophic cardiomyopathy? A: 29 Excited to share our latest: Re-Appraisal of HCM genes by our ClinGen Hereditary CVD Gene Curation Expert Panel out today in
@jaccjournals.bsky.social
www.sciencedirect.com/science/arti...
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Genes Associated With Hypertrophic Cardiomyopathy: A Reappraisal by the ClinGen Hereditary Cardiovascular Disease Gene Curation Expert Panel
Hypertrophic cardiomyopathy (HCM) is an inherited cardiac condition affecting ∼1 in 500 and exhibits marked genetic heterogeneity. Previously publishe…
https://www.sciencedirect.com/science/article/pii/S0735109724106560
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reposted by
Kate Thomson
Ana Morales, MS, CGC, PhDc
7 months ago
🫀🧬Great work by the Filamin C Registry Consortium! In their multicenter retrospective study, FLNCtv was linked to higher risk of sudden cardiac death (SCD) & malignant ventricular arrhythmia (MVA), especially in probands & phenotype-positive cases.
jamanetwork.com/journals/jam...
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Arrhythmic Risk Stratification of Carriers of FLNCtv
This cohort study investigates the arrhythmic risk profile of carriers of filamin C truncating variants (FLNCtv) and the risk factors associated with the risk of life-threatening ventricular arrhythmi...
https://jamanetwork.com/journals/jamacardiology/article-abstract/2829882
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reposted by
Kate Thomson
Roddy Walsh 🇪🇺 🇺🇦
9 months ago
Our study on an SCN5A enhancer variant that is a major cause of Brugada syndrome in Thailand has just been published in the first
@ahajournals.bsky.social
Circulation issue of 2025 - also now open access!
www.ahajournals.org/doi/full/10....
#cardiosky
#cardiogen
🧬
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A Rare Noncoding Enhancer Variant in SCN5A Contributes to the High Prevalence of Brugada Syndrome in Thailand | Circulation
BACKGROUND: Brugada syndrome (BrS) is a cardiac arrhythmia disorder that causes sudden death in young adults. Rare genetic variants in the SCN5A gene encoding the Nav1.5 sodium channel and common nonc...
https://www.ahajournals.org/doi/full/10.1161/CIRCULATIONAHA.124.069041
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reposted by
Kate Thomson
European Society of Human Genetics
9 months ago
Announcing new free ESHG webinar series! 🗓️ Last Wednesday of each month 📅 First episode: Feb 26, 2025 (16:00 CET) 🎤 Speaker: Malte Spielmann 💡 Topic: "The Dark Side of the
#Genome
: Challenges & Opportunities in the Post-Genomic Era" 🔗 Register now:
wma.eventsair.com/eshg-webinar...
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reposted by
Kate Thomson
Padraig Dixon
10 months ago
The changing landscape of genetics and insurance in the UK - report on an event hosted by the Centre for Personalised Medicine, Oxford and the British Society for Genetic Medicine.
bsgm.org.uk/media/12689/...
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https://bsgm.org.uk/media/12689/the-changing-landscape-of-genetics-and-insurance-in-the-uk-final.pdf
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reposted by
Kate Thomson
Sean
10 months ago
🧬 Our dilated
#cardiomyopathy
GWAS out today! 📍https://www.nature.com/articles/s41588-024-01952-y All made possible with friends and collaborators from HERMES Consortium
@alberthenry.bsky.social
@tomlumbers.bsky.social
@jamesware.bsky.social
@mrc-lms.bsky.social
@imperialnhli.bsky.social
#BHF
🧵 👇
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reposted by
Kate Thomson
Roddy Walsh 🇪🇺 🇺🇦
10 months ago
A little editorial I wrote for
#JACCHF
on the challenges of identifying modifier genetic factors for hypertrophic cardiomyopathy.
@jaccjournals.bsky.social
authors.elsevier.com/a/1kCHM7tD%7...
(<- free access link until Jan 21st)
#cardiogen
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