🎉 Big news: our paper "Representation matters" just got accepted as a Registered Report (Stage 1) in Nature Methods! 🧬 We're building the first rigorous, preregistered benchmark of instance segmentation representations in bioimage analysis. 🧵👇 (1/3)

🚀 Excited to share our new work in Scientific Reports! 🧠🔬 “Automated segmentation of neurons and spinal cord structures in immunofluorescence images using SpineDL” Happy to have contributed as co-first author together with Pablo Ruiz-Amezcua. 🔗https://doi.org/10.1038/s41598-026-57519-w 🧵👇

BiaPy in Galaxy. Check it out! 🤓 galaxyproject.org/news/2025-10...

BiaPy is now In Galaxy!! Don't miss the chance of using it to build your workflows in the cloud ;D

Looking for a PhD in AI & bioimage analysis? 🤠This is basically the ‘boss level’ of opportunities: cutting-edge research + a mentor you’d actually want to have coffee with. Don’t miss it 👇

In the meantime, we have more than 46 pretrained models from ⛴️ BiaPy available now in the 🦒 Bioimage Model Zoo 🫶 @ai4life.bsky.social 🔗 Have a look at: bioimage.io#/models As usual, they are accesible from BiaPy's GUI 🖥️, Colab notebooks 📔 and our API 🤓

⛴️ BiaPy just reached version 3.6.1 💫 (latest release)! github.com/BiaPyX/BiaPy... ➡️ v3.6.1 came right after (the more dense) v3.6.0 to fix some small bugs 🐞 Let me tell you a bit about what's new 👇

Prou (ex-)supervisor & (always) mentor of @ai4life.bsky.social @egomezm.bsky.social Teresa Zulueta Coarasa; @danifranco93.bsky.social @cfusterbarcelo.bsky.social Carlos Garcia Lopez de Haro @uc3m @cienciauc3m

💬 After lunch, we’re back with the AI4Life Community: tool builders, research infrastructures, and industry voices. Community tools like @biapyx.bsky.social and SpotMAX show how AI4Life partners are building bridges between developers and end users.

@biapyx.bsky.social & Bioimage Model Zoo making people Happy! 😅 at #neubiaspasteur2025 @jwpylvanainen.bsky.social @ai4life.bsky.social

No words needed! #neubiaspasteur2025 @iarganda.bsky.social @danifranco93.bsky.social @biapyx.bsky.social Thank you @jwpylvanainen.bsky.social

Don’t miss the opportunity to work with a scientist like @iarganda.bsky.social !! Kind, honest and brilliant! Plus, the position is located in the beautiful Donostia / San Sebastian. What more do you need? 👇👇

Kudos to you, my captain! 🦸‍♂️

So happy to see this finally out! 🤗 Amazing job from an awesome team: @ivanhcenalmor.bsky.social, @aaitorg.bsky.social, @caporalclement.bsky.social, @lmescu.bsky.social, @arratemunoz.bsky.social munoz.bsky.social, & more! Specially proud of @danifranco93.bsky.social that dedicated his PhD to this 🥰

Finally BiaPy is out in Nature Methods! 🥳🥳🥳 A major milestone in my research! I'm incredibly proud of the progress made. Huge thanks to my PhD supervisors, @iarganda.bsky.social and @arratemunoz.bsky.social , for their invaluable guidance and support throughout this journey. Check out the thread🧵👇

🆕 Did you experience troubles ⚠️ while installing BiaPy in our Google Colab notebooks? We did too! This is due to some updates in the default libraries of Colab. As a temporary solution, we have now included a new cell in the notebooks to reinstall the conflicting libraries 👇

🆕 Now that the bugs have been fixed 🙃, we have a new video 📹 tutorial on how to import pretrained models from the BioImage Model Zoo 🦒 into your #BiaPy workflow using our friendly GUI 🖥️, by @iarganda.bsky.social: youtu.be/Zq50Ew1s8ag

It took me more than 4 years to capture a scene I could only dream of. A magnificent Condor soars above the peaks of Argentina's Mount Fitz Roy, as they are spot lit in beautiful morning light. 🪶 #bluesky #photography #landscape #birds #nature #landscapephotography #naturephotography #travel #scape

Don't miss the chance to check what's new in BiaPy's GUI! 😍

When you’re imaging and your sample takes a Pikachu! Having fun playing around with our new #Nikon NSPARC for #FluorescenceFriday #microscopy #myosin #epithelial #cellbiology #meme @tyskalabactual.bsky.social

Welcome to the Science feed! Please read our FAQs for instructions for how to be added as a contributor: bossett.io/science-feed/ Mod introductory posts linked below⬇️ Use the test tube emoji on posts you want to appear in the feed🧪 Please like the feed and make sure you follow our feed rules:

Check out #ZebrafishZunday every Sunday for fintastic fish #sciart! 🧪

Is there any list I can join to see posts related to connectomics? 🧪🧪

Did you like what you heard about BiaPy at #SPAOM2024? 🔬 Are you interested in giving its GUI a try? 🖥️🧙 Search no more! Here you have our walkthrough video tutorial on BiaPy's GUI by @danifranco93.bsky.social 🤗 Let us know your thoughts, all feedback is welcome! 🤩 youtu.be/vY7aBh5FUNk?...

With how easily I get cold, I’ve had the luck to come to Cambridge during the coldest weeks of the year, according to the locals! Lucky me! 🧊🧊❄️❄️

Don't miss the chance of knowing the last updates of BiaPy in #SPAOM2024!!! 🔬🤓

This paper is incredible. EM level connectomics on a light microscope. www.biorxiv.org/content/10.1...

Discover the key to unlocking impactful scientific contributions in the world of machine learning! 🤖📈 This tutorial aims to increase the quality of scientific contributions using reproducible methods, appropriate validation techniques, and better code quality. 🧪

Los tuits con bulos sobre salud tienen mucho más alcance que los científicos porque sus seguidores son mucho más activos y fanáticos. Así que si veis información interesante y de calidad: compartid y dad like. Es otra forma de luchar contra ellos.

Today was my first day in Cardona's lab at MRC LMB. It was a pleasure to meet my new lab colleagues and I'm excited for the upcoming projects to develop. Stay tunned!

🆕 We have updated our preprint in @biorxivpreprint.bsky.social 📰 It explains better the current state of #BiaPy ⛴️ while describing as well its limitations 🤗 Hope you like it! "BiaPy: Accessible deep learning on bioimages" www.biorxiv.org/content/10.1...