Capturing 100 years of antibiotic resistance evolution www.ebi.ac.uk/about/news/r...

🚧 “Closed for training” this week — learning to fly our new PromethION P2i @nanoporetech.com 🧬🚀 Metagenomes, big genomes, epigenetics, transcriptomics… here we come! We generate data. We analyze data. We generate knowledge. 💥

📢 Join us for the next ECDC Lighthouse webinar “The public as partners: unlocking the potential of citizen science in disease prevention and control”. What happens when science opens its doors to the public? 🗓️ Monday 22/09/2025 🕕 13.00-14.00 CET 💻 Online #ECDCLighthouse

Alucino escuchando a @perestupinya.bsky.social en @avivirser.bsky.social anunciando la cancelación de El cazador de cerebros y @orbitalaika.bsky.social en @rtvecom.bsky.social cuya nueva dirección no parece tener interés en que la sociedad sepa de ciencia de forma cercana/rigurosa. Un despropósito.

New record set! Scientists have sequenced the oldest host-associated microbial DNA ever found, from mammoths. This groundbreaking work opens the door for deeper study of the bacterial communities that existed over a million years ago. #AncientDNA #NGS www.sciencedirect.com/science/arti...

Excited to say we’re hiring 😊. We’re looking for a post-doc in ancient pathogen genomics to join our friendly supportive team in London at @ugiatucl.bsky.social. Start date January 2026. www.ucl.ac.uk/work-at-ucl/...

Enough is enough. The health of the country is in danger. Read our resignation letters: insidemedicine.substack.com/p/breaking-n...

New online! Viromics approaches for the study of viral diversity and ecology in microbiomes

A postdoc position in genomics available at our infrastructure in Uppsala, Sweden! An interesting R&D role a bit outside the traditional academic environment, great colleagues, work at the forefront of (long-read) sequencing. www.uu.se/en/about-uu/...

To truly understand health in a global sense, we need to integrate #genomics with #exposome. This recent paper highlights how this integrated vision can drive a more realistic #PrecisionMedicine. The future of precision health will be genomic… but also environmental. www.nature.com/articles/s41...

Great news for those of us using #ONT for #bacterial genome reconstruction and epidemiological surveillance! According to these authors, we now have sufficient quality to achieve the reproducibility and accuracy required for effective bacterial surveillance. #genomicepidemiology

Ayer fue el día del libro. Lo celebro con esta modesta aportación en forma de opúsculo sobre salud cerebral. Orgulloso de compartir autoría con @memarzo.bsky.social, prologo Raúl Juárez y portada de un excelso ilustrador, @difol.bsky.social Espero lo disfrutéis www.researchgate.net/publication/...

Discrepancies in IncF plasmid subtyping? A study on >70,000 E. coli genomes found 8% showed pMLST issues: multiple replicons, overlaps, inconsistent calls. 3rd gen sequencing proves essential to fully resolve these mobile genetic elements. #Plasmids #AMR pubmed.ncbi.nlm.nih.gov/40197103/

Amazing initiative! One step forward, UK 🇬🇧 decides to launch a surveillance program from the #metagenomics perspective. Please remember: metatax is not metagenomics!! www.thelancet.com/journals/lan...

What sequencing options do we have in #NGS? Well, with a bit of data mining and by updating and adapting some great charts from fellow colleagues...

La noticia del día. La bancarrota de la empresa 23&me pone en peligro los datos genómicos de 15M de personas. www.eldiario.es/tecnologia/e...

La empresa #23andme dedicada a los analísis genéticos directos al consumidor ha quebrado y ha solicitado la declaración de bancarrota. Se estima que tiene los datos genómicos de más de 15 millones de personas, mayoritariamente norteamericanos. Via @eldiario.es t.co/NV9c7dEmfB

The Trump administration has terminated $800 million in grants to Johns Hopkins University, spurring the nation’s top spender on research and development to plan layoffs and cancel health projects

NIH Funding / Month for Mar 2024 - Mar 2025 🧪 usaspending.gov Sharp decline from Mar 2024 ($319M) to Mar 2025 ($24M)

Interactive tool to track #AMR trends in #Salmonella, #Ecoli, and #Campylobacter across Europe (2022-2023) developed by @efsa.europa.eu 🔗 multimedia.efsa.europa.eu/dataviz-2023... #AMR #FoodSafety #EFSA #OneHealth #DataViz

El @iatacsic.bsky.social organiza junto con la red #OneHealth4Food el Workshop "Ensuring Food Safety in a Changing World: Challenges and Strategies", centrado en la #Seguridad alimentaria. 📍IATA-Valencia 🗓️ 9/04/2025 📄 saco.csic.es/s/rr2jXjpPWA... 🔗 saco.csic.es/apps/forms/s...

The European Union summary report on antimicrobial resistance #AMR in #zoonotic and indicator #bacteria from humans, animals and food in 2022–2023. Joint @efsa.europa.eu & @ecdc.europa.eu report. #OneHealth www.ecdc.europa.eu/en/publicati... www.ecdc.europa.eu/en/news-even...

Roche's SBX sequencing by expansion - preprint out! www.biorxiv.org/content/10.1...

Amazing news on single molecule sequencing tech!!!! Developed by #Roche Sequencing by Expansion (SBX) — a novel, high-throughput single-molecule sequencing technology ‼️https://lnkd.in/dYjhzx9P ‼️https://lnkd.in/dDhdtHAW ‼️ lnkd.in/dj-tq2xj

Mary Beard escribió: «si las mujeres no están en las estructuras de poder, lo que tenemos que redefinir es el poder, no a las mujeres».  https://mujeresconciencia.com/2025/02/25/wikiemakumeok-10-000-biografias-de-mujeres-en-10-anos/

Applying the FAIR Principles to computational workflows https://www.nature.com/articles/s41597-025-04451-9 🧬🖥️🧪 Nextflow = batteries included 🔋

The success of genomics has relied on open data-sharing practices since the Human Genome Project. But as research evolves, are we at risk of losing this collaborative mindset?

Amazing day in Zaragoza with Universidad San Jorge, reconnecting with brilliant bioinformaticians! Talks on oncology, paleogenomics, AI, and the role of bioinfo platforms. Big thanks for having me and for spreading the love for our field! #Bioinformatics #Science

el ictus en España es: —😡1ª causa de muerte en mujeres, 2ª en global —😡1ª causa de discapacidad en adultos —😡2ª causa de demencias Minimizar sus consecuencias requiere un tratamiento urgente, que va mejor cuanto antes se inicia. Aprende a reconocerlo Ayúdanos a ayudarte

10 days of Trump’s administration create chaos in the country, making the USA currently the enemy of global public health. www.nature.com/articles/d41...

I got interviewed by @nature.com 🙃🧪 www.nature.com/articles/d41...

One of my top tools for primary data quality analysis, so essential for downstream analyses: #MultiQC. This recent update is incredibly useful! seqera.io/multiqc/ github.com/MultiQC/Mult...

El próximo #14F nos vemos en #Zaragoza, para hablar de diferentes aspectos de la #Bioinformatica. Organizado por #UniversidadSanJorge Podéis apuntaros 👉🏻 actividades.usj.es/2024-25/iii-...

We’re facing a great reproducibility problem? Publish or perish is killing science?? www.nature.com/articles/d41...

📢 @sotonbiosciences.bsky.social are seeking an Associate Professor or #Professor with experience in the #biology and mechanisms of microbial #biofilms to contribute to enhancing NBIC’s reputation as a pioneering centre for #biofilm research and #innovation Apply by 28 Feb 2025➡️ tinyurl.com/mr756rap

María os aporta un (buen) comentario y el enlace al #RSeqFlow #rstats. @bcbhubcsic.bsky.social @ihsmumacsic.bsky.social Muy pronto, los más de 30 min de chapa los tendréis en conexion-bcb.csic.es/seminarios-o... para los masocas de la #bioinfo.

Great seminar about RNAseq analysis in non-model organisms by @mgclaros.bsky.social . Interesting R-tool to easily analyze and visualize RNAseq data. Really nice! #RSeqFlow github.com/mgclaros/RSe...

Really interesting #bioinformatics tool for integrating #Omics data! Thanks to @anaconesa.bsky.social seminar! Clear and useful to understand the potential of this tool! ⚒️ WebTool: paintomics.uv.es 📎 Paper: academic.oup.com/nar/article/... 🏳️ Tutorial: github.com/ConesaLab/pa...

🧬✨ How does Illumina detect DNA bases? 🔍 The 4-color system uses distinct dyes, while the 2-color system speeds up sequencing. 🚀 Learn how this impacts your NGS results: https://www.ecseq.com/support/ngs/do-you-have-two-colors-or-four-colors-in-Illumina ##NGS ##Genomics ##Illumina ##Bioinformatics

I'm putting together a Microbial Bioinformatics starter pack to help get everyone connected in our community. Let me know if there are any bluesky users to be added and share so that twitter refugees can tune back in to the fantastic world microbes go.bsky.app/3ezLo7e

💊🦠OUT NOW - comprehensive analysis of the propensity of ESKAPE pathogens to evolve resistance to new and in development antibiotics by Csaba Pal, Balint Kintses, Balazs Papp and colleagues. Dive in here... www.nature.com/articles/s41...

Review highlights the transformative role of phylogenetic methods in genomics, enhancing understanding of evolutionary genetics by addressing species' data non-independence. Key for comparative studies. #Genomics #EvolutionaryBiology www.nature.com/articles/s41...

In over 460,000 women throughout Germany, #AI second readings of mammograms led to improved breast cancer detection, a lower recall rate, and significantly reduced workload nature.com/articles/s41... open-access

Ten months ago I posted this comic on LinkedIn. It has received over 300 likes in different forms. With humor, but as a critique of those who don't value our work. Let's keep making our demands in 2025! #Bioinformatics

Here's to a 2️⃣0️⃣2️⃣5️⃣ filled with love ♥️ and lots of health (lots and lots), that allows us to enjoy our loved ones, work hard and travel ✈️ even more. Here we go!! 😉

Good Bioinfo news for starting this year!!

366/366 My best moment of 2024. The sunsets in Oia with my favorite person. Here's to more moments in 2025. Happy New Year. 🎤 @shinovaoficial “Los días que vendrán”

Some feelings and summary about the recent review "International consensus statement on #microbiome testing in clinical practice" www.linkedin.com/pulse/intern...