Apply to join us this July for a crash course on Python & bioimage analysis tailored specifically for beginners! Applications due May 18th 🔬💻 #BoBiAC2026 bobiac.github.io

This QI course is the perfect way for grad students & postdocs to strengthen fundamental knowledge and confidence in their quantitative light microscopy experimentation! Deadline to apply is TOMORROW! 🔬

Don't let the price of QI deter you! QI offers financial aid through NCI, HHMS, and @bioimagingna.bsky.social. Include a brief statement of need with your application. Aid is distributed by CSHL (not the course instructors). Many of our students - sometimes all! - receive significant support.

QI Class of 2025! Centroid = @sciencedoodles.bsky.social & @florianjug.bsky.social / first minima = @talley.codes & me. Applications for 2026 due on Friday! meetings.cshl.edu/courses.aspx...

There's exciting Microtutor news in store for 2026! Be the first to hear the latest on course releases and other learning opportunities by signing up for the Microtutor mailing list: lp.constantcontactpages.com/sl/5BYgJu6/m...

🔬 🖥️ Applications are open for the CSHL course Quantitative Imaging: From Acquisition to Analysis (April 6–21, 2026)! An intensive, hands-on course covering advanced fluorescence microscopy and quantitative image analysis using open-source tools. 🗓️ Apply online by Jan 30, 2026

Do you like building novel optical microscopes to answer complex biological questions? How about doing that as part of one of the world’s most unique and vibrant research and education communities, which is incidentally located in a beautiful seaside New England village? 🐙🌊🔬

These workshops are perfect for grad students & postdocs in the Boston area that are either planning or actively conducting microscopy experiments in their research! More info about the workshops, along with the application, here: cite.hms.harvard.edu/education/wo...

Big news! Our week-long #bioimageanalysis bootcamp is BACK! Learn how to think about bioimage analysis like the pros do, learn what corrections you should (and shouldn't!) apply to your images, learn open source tools, and more. Apply NOW at broad.io/BAB3 for our January 2026 course!

Check out our amazing #bobiac2025 cohort! Was a joy to teach this group! Thanks @bioimagingna.bsky.social for generously supporting this 6 week bioimage analysis w/Python course!

Day 1 of #bobiac2025 🐍 The day started strong with @talley.codes speaking about the Python ecosystem and uv. Students then gave short talks about their research (#coolscience). It was then time to code in Python with @sciencedoodles.bsky.social!

‼️3 days left to apply to the Boston Bioimage Analysis Course (BoBiAC)! 💻 Get started w/Python & learn to analyze fluorescence microscopy images — no programming experience required! Fee waivers available! 🗓️ Apply by June 1st! 🌐 iac.hms.harvard.edu/bobiac/2025/

Apply to join our awesome @citehms.bsky.social & @hms-iac.bsky.social teaching team this summer at #BoBiAC! We’ll guide you step-by-step through segmentation, classification, and colocalization on fluorescence microscopy images using Python — no coding experience required!

We are proudly hosting 𝐃𝐫. 𝐓𝐚𝐥𝐥𝐞𝐲 𝐋𝐚𝐦𝐛𝐞𝐫𝐭 @talley.codes (CITE, Harvard Medical School): 𝐒𝐢𝐦𝐮𝐥𝐚𝐭𝐢𝐧𝐠 𝐫𝐞𝐚𝐥𝐢𝐬𝐭𝐢𝐜 𝐥𝐢𝐠𝐡𝐭 𝐦𝐢𝐜𝐫𝐨𝐬𝐜𝐨𝐩𝐲 𝐢𝐦𝐚𝐠𝐞𝐬 𝐮𝐬𝐢𝐧𝐠 𝐦𝐢𝐜𝐫𝐨𝐬𝐢𝐦 When: 𝐌𝐚𝐲 𝟐𝟗𝐭𝐡 @ 𝟏𝟏 𝐚𝐦 𝐄𝐃𝐓 (Boston time) Join us on Zoom! harvard.zoom.us/j/9762343464...

BIG NEWS - for the first time ever, we're running a Bioimage Analysis Beginnings Bootcamp. Learn #bioimageanalysis from awesome folks, and gain familiarity with some new tools as well as how to pick the right tool in the first place. Aug 4th-8th - apply here (soon!) forms.gle/d2fCXsrWHVP8...

Can highly recommend! Not only is Python one of the most versatile tools in bioimage analysis, but bioimage analysis itself is also an excellent way for visual learners to learn and improve their Python skills! And it is led by fantastic people!

New to bioimage analysis & Python? Want to quantify fluorescence microscopy images, explore segmentation & classification, & try colocalization analysis using Python? If so, this course is for you! Apply by June 1st! 🔬💻https://iac.hms.harvard.edu/bobiac/2025

🚨Latin American Workshop Series🚨 The team from @bethcimini.bsky.social‘s lab at @broadinstitute.org and the Center for Open Bioimage Analysis will host three free online image analysis workshops for LATAM ... in SPANISH🇪🇸 and PORTUGUESE🇧🇷!!!🎉🎊 broad.io/latam_worksh... Deadline: April 23rd, 2025

Great opportunity if you're in the Boston area and want to learn about bioimage analysis in Python! forum.image.sc/t/boston-bio...

Slick t-shirt design for @qiatcshl.bsky.social made by @sciencedoodles.bsky.social featuring fan favorite the bench scope

Congratulations to students @nancypaniagua.bsky.social & Michal for placing 1st & 2nd place in our @ilastik-team.bsky.social pixel classifier challenge to segment with the least amount of annotations! #lazyannotationsftw

The students (totally) loved our TIRF lab! Check out this fluorescein solution sample we used to visualize internal reflection on the scope - 📸 by student Augusto Berrocal

Our image analysis expert instructors, @bethcimini.bsky.social, @damiandn.bsky.social, @florianjug.bsky.social & Hunter Elliott, are in full swing!

It's TIRF time again at QI!!! 🎉 🔬Check out @jencwaters.bsky.social's infamous TIRF demo to understand the principle behind total internal reflection vs refraction! #gonetirfing #criticallyawesome

🥳 Ft. a lovely little water bear from the moss by Hershey at @cshlnews.bsky.social!

I spy with my little eye...a sneak peek of our light sheet microscopy lab samples! Perks of being a @cshlnews.bsky.social course is access to lots of great sample collecting spots! #catchoftheday #tardigrades

Our new course logo, by @sciencedoodles.bsky.social

@fedegasparoli.bsky.social is setting up our openSPIM in preparation for the light sheet lab next week. Pro tip: Stouts block light more effectively than lagers.

Excited teach & help w/BoBiAC! This course is perfect for grad students & postdocs using fluorescence microscopy to learn how to use python to process & analyze image data! Best part: it's beginner friendly - no python experience required! More info & apply: iac.hms.harvard.edu/bobiac/2025/...

So excited for QI 2025!!! 🔬 Follow @qiatcshl.bsky.social for the latest QI news!

Come learn microscopy with us by the sea in May!

The Quantitative Imaging: From Acquisition to Analysis course at CSHL is now on Bluesky! Follow us for updates on future course dates and fun photos when the course is in progress. Applications for this years course (March 24- April 8) are due next week on Jan 31!

Applications for our Quantitative Imaging: From Acquisition to Analysis 2025 course (Mar 24-Apr 8) are due on Jan 31! Come immerse yourself in microscopy and image analysis with me, @talleylambert.bsky.social, @bethcimini.bsky.social, @florianjug.bsky.social & Hunter Elliott! Please RT

This course is a perfect opportunity for grad students & postdocs using optical microscopy to study biology! You will strengthen fundamental knowledge and confidence in approaching your quantitative light microscopy experimentation. Apply by Jan 31! 🔬

Join us for our first workshops of 2025! 📌 Workshop 1: Image analysis with ImageJ/Fiji 📆 Date: Jan 22 & 24, 2025 🔗 tinyurl.com/iac-fiji-202... 📌 Workshop 2: ImageJ/Fiji's macro language 📆 Date: Jan 28, 2025 🔗 tinyurl.com/iac-fiji-mac... 📍 Location: HMS campus, Boston Open to all—don't miss out!

Join me, @talleylambert.bsky.social, @bethcimini.bsky.social, @florianjug.bsky.social & Hunter Elliott for our two week CSHL course on microscopy & image analysis starting March 24, 2025! Applications are due 1/31/25. meetings.cshl.edu/courses.aspx...

We are so excited that @janfunkey.bsky.social has agreed to give the keynote seminar for @qiatcshl.bsky.social 2025 @cshlnews.bsky.social! 🔬🖥️ 🛤️ Applications due 1/31/2025. t.co/x87ngy34UC

We've created a mailing list for Microtutor, our interactive virtual light microscopy courses! Join to learn about new courses: lp.constantcontactpages.com/sl/5BYgJu6/m... Microtutor: microtutor.globalbioimaging.org

Made a starter pack for microscopy and image analysis - please (self-)nominate additions! go.bsky.app/Nwa91pC

An excellent primer on co-localization analysis from Federico Gasparoli! youtu.be/Mv4M1HaYdBc @fedegasparoli.bsky.social

If you'd like to learn more about the tools available in the Fluorescent Protein Database, FPbase, here's an excellent lecture from creator Talley Lambert! youtu.be/nETkUNQ48Sg

Calling all fluorescence microscopy enthusiasts! Whether you're just starting out or you've logged many hours at the microscope, Microtutor LIVE has something new for you. Apply here: tinyurl.com/microtutorli... #microtutor

Ever struggled with planning a realistic microscopy experiment? The Microtutor LIVE Fluorescence Microscopy course this fall features an optional project, in which learners write their own microscopy experiment proposal! More info & apply at tinyurl.com/microtutorli... #microtutor

Check out Microtutor LIVE! Work through a Microtutor imaging course on your own schedule & meet with instructors virtually for Q&A. 1st course on Fluorescence Microscopy is scheduled for the fall! FREE & open to all! More info & apply at tinyurl.com/microtutorlive2024 #microtutor

📢 We’re seeking a talented postdoc for Advanced Microscopy Fellows Program @harvardmed. Learn cutting-edge light microscopy techniques and more! microfellows.hms.harvard.edu/apply/

The first Microtutor interactive virtual imaging course is now live on the Global BioImaging training platform! Learn fundamental principles that are critical to rigorous fluorescence microscopy experiment design. Free & open to all! Funded by CZI. microtutor.globalbioimaging.org

We're kicking 2024 with a workshop about the Segment Anything Model (SAM) for Microscopy Data, organized with our friends and neighbors from the Nikon Imaging Center. Apply here: t.co/yL2sflfqKY

This QI course is the perfect way for grad students & postdocs to strengthen fundamental knowledge and confidence in their quantitative light microscopy experimentation! Deadline to apply is Jan 31 🔬

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