Frederic Lemoine
@fredlem.bsky.social
📤 44
📥 45
📝 6
Bioinformatics Scientist
@pasteur.fr
,
#virus
,
#sequencing
,
#phylogeny
,
#bioinformatics
reposted by
Frederic Lemoine
Marin Dacos
3 months ago
Le Monde se fait l'écho de l'activité du Réseau de recherche reproductible, que nous finançons dans le cadre de la politique de science ouverte. Intéressant de voir que ces sujets peuvent être exposés un large public.
add a skeleton here at some point
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reposted by
Frederic Lemoine
Réseau français de la recherche reproductible
3 months ago
🔬♻️ « Quand la science s’amuse Ă se reproduire » Merci Ă
@lemonde.fr
et à David Larousserie pour la mise en lumière des
#ReplicationGames
du 3 octobre, co-organisés par le Réseau Français de la Recherche Reproductible et
@i4replication.bsky.social
.
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reposted by
Frederic Lemoine
Réseau français de la recherche reproductible
3 months ago
👏 Many thanks to everyone who took part in the Replication Games on Friday, October 3rd! 6 teams joined the challenge, 5 in person and 1 online, bringing curiosity and collaboration to every step and making this event a truly inspiring collective experience around reproducibility & open science.
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reposted by
Frederic Lemoine
Nico Rascovan
6 months ago
www.youtube.com/watch?v=hMH1...
I am very thankful to the
@ec.europa.eu
for highlighting my research at
@institutpasteur.bsky.social
. It is a privilege for me to have the opportunity of developing my professional life here.
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From Ancient Bones to Modern Insights: Argentinian Scientist Uncovering History of Disease in Paris
YouTube video by European Commission
https://www.youtube.com/watch?v=hMH1mvS8tEQ
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reposted by
Frederic Lemoine
Institut Pasteur Education
7 months ago
Nouveau Cours Pasteur - Pandemics: Origins and Response 📍Institut Pasteur, Paris 📆Du 19 au 30/01/2026 🗣️En anglais ⏳Inscriptions ouvertes jusqu’au 31/10/2025 Un cours pour comprendre les facteurs d’émergence, les dynamiques de propagation, et tirer des leçons des précédentes crises sanitaires.
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Nouveau Cours Pasteur - Pandemics: Origins and Response
YouTube video by Institut Pasteur EDUCATION
https://youtube.com/shorts/oymTgVgPgRM?feature=share
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PhyML now implements the Bayesian phylogenetic bootstrap (
academic.oup.com/mbe/article/...
)! To test it: option "--bayesian_bootstrap" with the latest commits of PhyML:
github.com/stephaneguin...
Example: `phyml -d nt -i align.phy -m GTR -b 100 --bayesian_bootstrap`
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The Bayesian Phylogenetic Bootstrap and its Application to Short Trees and Branches
Abstract. Felsenstein's bootstrap is the most commonly used method to measure branch support in phylogenetics. Current sequencing technologies can result i
https://academic.oup.com/mbe/article/41/11/msae238/7887751
7 months ago
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reposted by
Frederic Lemoine
Laurent Jacob
7 months ago
Registration is now open! The 580€ include housing and all meals. We will close on October 17th or when reaching 80 participants.
add a skeleton here at some point
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reposted by
Frederic Lemoine
David Bikard
8 months ago
I will be recruiting new postdocs with start dates end 2025 - early 2026. If you'd like to work at the Pasteur Institute in the heart of Paris surrounded by amazing scientists, reach out to discuss possible projects on SynBio / Bacterial Immunity!
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reposted by
Frederic Lemoine
katja heuer
9 months ago
Henrik Kaessmann
@kaessmannlab.bsky.social
taking us on an amazing journey to the origins and evolution of the vertebrate brain at
#ECCN2025
@borrell-lab.bsky.social
@r3rt0.bsky.social
@zoltan-molnar.bsky.social
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Pour ou contre l'IA? "Ne pas confondre recherche et précipitation", par
@chtruchet.bsky.social
dans
@maglarecherche.bsky.social
www.larecherche.fr/intelligence...
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Ne pas confondre recherche et précipitation
https://www.larecherche.fr/intelligence-artificielle/ne-pas-confondre-recherche-et-précipitation#
9 months ago
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reposted by
Frederic Lemoine
10 months ago
We are hiring an RE in Bioinfo and Biostats for the COPAFLICT project! It seeks to improve knowledge of viral hemorrhagic fevers and offer new perspectives for their diagnosis and treatment. Come and work with us at the Hub in
@institutpasteur.bsky.social
! See:
hub-jobs2025.pasteur.cloud
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Research engineer position(s) at the Bioinformatics and Biostatistics Hub of Institut Pasteur
https://hub-jobs2025.pasteur.cloud/
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We're hiring! Join the Hub of Bioinformatics and Biostatistics at
@pasteur.fr
as the Head of the "Algorithmics, AI, and Mathematical Modeling" pole. 🧬💻 Apply now:
hub-jobs2025.pasteur.cloud
#Bioinformatics
#ScienceJobs
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Permanent research engineer position as Head of Hub Algorithmics & AI pole - Research
The Hub of Bioinformatics and Biostatistics provides analytical support to research units and platforms at the Institut Pasteur. The Hub is committed to this mission through:Â As head of the Algorithm...
https://research.pasteur.fr/en/job/permanent-research-engineer-position-as-head-of-hub-algorithmics-ai-pole/
11 months ago
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Publications scientifiques : alerte tsunami
youtu.be/QPPbsqcZ4Ew
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Publications scientifiques : alerte tsunami !
YouTube video by Grand Labo
https://youtu.be/QPPbsqcZ4Ew
12 months ago
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Colloque annuel du Réseau français de la recherche reproductible à Lyon
openscience.pasteur.fr/2025/01/27/l...
via le Centre de Ressources en Information Scientifique (CeRIS)
@pasteur.fr
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Le Réseau français de la recherche reproductible vous donne rendez-vous les 3 et 4 avril 2025 à Lyon pour son colloque annuel
Le Réseau français de la recherche reproductible est une initiative nationale informelle qui rassemble des scientifiques engagés dans l’étude des facteurs favorisant la reproductibilité de la reche…
https://openscience.pasteur.fr/2025/01/27/le-reseau-francais-de-la-recherche-reproductible-vous-donne-rendez-vous-les-3-et-4-avril-2025-a-lyon-pour-son-colloque-annuel/
12 months ago
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reposted by
Frederic Lemoine
Computational Biology Dpt at Pasteur
about 1 year ago
Our Primer Methods session continue! This morning
@bonomimax.bsky.social
will talk about Bayesian inference in integrative structural biology, presenting theory and applications where different types of experimental data have to be combined to obtain accurate structural models of biological systems
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"Highly recurrent multi-nucleotide mutations in SARS-CoV-2" by 0Nicola De Maio, Kyle Smith, Yatish Turakhia, and Nick Goldman
www.biorxiv.org/content/10.1...
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Highly recurrent multi-nucleotide mutations in SARS-CoV-2
Multi-nucleotide mutations (MNMs) simultaneously replace multiple nu-cleotides. They are a significant contributor to evolution and disease, as well as to misdiagnosis, misannotation and other biases ...
https://www.biorxiv.org/content/10.1101/2024.12.14.628346v1.abstract
about 1 year ago
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reposted by
Frederic Lemoine
Computational Biology Dpt at Pasteur
about 1 year ago
A new Primer Method today: Sebastien Duchene will present Bayesian phylodynamic models, discussing the prior distributions of key parameters, and the extent to which they can impact downstream inferences of the evolutionary dynamics of organisms.
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