Anna Brüniche-Olsen
@annabruniche.bsky.social
📤 281
📥 255
📝 38
Evolutionary biologist studying conservation genetics.
reposted by
Anna Brüniche-Olsen
Laura Bertola
1 day ago
Evaluating inbreeding and assessing the risk of outbreeding depression in genetic rescue using whole-genome sequence data
www.pnas.org/doi/10.1073/...
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PNAS
Proceedings of the National Academy of Sciences (PNAS), a peer reviewed journal of the National Academy of Sciences (NAS) - an authoritative source of high-impact, original research that broadly spans...
https://www.pnas.org/doi/10.1073/pnas.2526216122
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reposted by
Anna Brüniche-Olsen
Dr Mark E Hauber
8 days ago
www.cell.com/trends/ecolo...
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Pangenomes: new tools for ecological and evolutionary genomics
Genomic structural variation is an important component of genetic variation in natural populations. By assembling and analyzing multiple high-quality genomes within a species or clade, pangenomes capt...
https://www.cell.com/trends/ecology-evolution/abstract/S0169-5347(25)00344-1?rss=yes
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reposted by
Anna Brüniche-Olsen
Science Magazine
10 days ago
A new
#ScienceAdvances
study shows that commercial whaling in the Southern Ocean over the past century reduced the genetic diversity—and possibly the evolutionary fitness—of the region’s humpback whales.
https://scim.ag/4anxPpM
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Humpback whale genomes reflect the increased efficiency of commercial whaling
Humpback whale genomes reflect shifts in whaling practices and their potential impact on the animals’ adaptive capacity.
https://scim.ag/4anxPpM
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reposted by
Anna Brüniche-Olsen
Tammy Steeves
26 days ago
What are the ‘social dimensions’ of moving species for conservation and why does engaging with them matter? This is the focus of our new paper
doi.org/10.1016/j.tr...
on the cover of the Dec issue of TREE
@cp-trendsecolevo.bsky.social
led by
@aisrayne.bsky.social
🙏 to Kevin Parker for the 📷
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reposted by
Anna Brüniche-Olsen
Judith Mank
about 1 month ago
Team fish - we need your help! We are trying to build a database of all the fish chromosome-scale genomes where sex chromosomes have been identified. Have you build one or some? Do you know someone who has? Can you post the link in the comments? Please spread the word and repost! Thank you!
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Accurate Runs of Homozygosity Estimation From Low Coverage Genome Sequences in Non-Model Species
#popgen
#consgen
doi.org/10.1111/1755...
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Accurate Runs of Homozygosity Estimation From Low Coverage Genome Sequences in Non‐Model Species
Runs of homozygosity (ROH) are increasingly being analysed using whole genome sequences in non-model species as a measure of inbreeding and to assess demographic history, thus providing useful inform...
https://doi.org/10.1111/1755-0998.70083
27 days ago
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reposted by
Anna Brüniche-Olsen
Marty Kardos
about 1 month ago
onlinelibrary.wiley.com/doi/10.1111/...
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Optimising Genome‐Wide Detection of Runs of Homozygosity: Impacts of Reference Genome Quality and Sequencing Parameters on Inbreeding Assessment
Inbreeding and inbreeding depression pose a critical challenge to the persistence of small and isolated populations, driving the need for precise assessment of genomic metrics. Genome-wide runs of ho...
https://onlinelibrary.wiley.com/doi/10.1111/1755-0998.70084
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reposted by
Anna Brüniche-Olsen
Laura Bertola
about 2 months ago
Anthropocene genetic diversity loss in the marine tropics
www.pnas.org/doi/10.1073/...
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Anthropocene genetic diversity loss in the marine tropics | PNAS
Genetic diversity is a crucial component of biodiversity, and as such, its maintenance and preservation is of high conservation concern. Tropical e...
https://www.pnas.org/doi/10.1073/pnas.2513012122
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reposted by
Anna Brüniche-Olsen
The Swedish Arctic Fox Project/Svenska fjällrävsprojektet
about 2 months ago
New study on arctic fox genomics shows strong effects of fur farming: reduced diversity, inbreeding, and coastal origins linked to Icelandic foxes. A reminder that domestication leaves deep genetic footprints. 🔗
doi.org/10.1111/mec.70166
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That's So Last Season: Unraveling the Genomic Consequences of Fur Farming in Arctic Foxes (Vulpes lagopus)
Humans have relied on animal fur for centuries, yet fur farming only began recently during the mid-19th Century. Little is known about this incipient domestication or the genomic processes involved. ...
https://doi.org/10.1111/mec.70166
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reposted by
Anna Brüniche-Olsen
Alexander Holm
about 2 months ago
Har skrevet denne her slasker. Helt kort, så lurer jeg på hvad der mon egentlig skal til, før Socialdemokratiet og Venstre vil hjælpe de mange millioner lidende dyr i det danske, konventionelle industrilandbrug?
politiken.dk/debat/debati...
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Hvor slemt skal det blive, før politikerne griber ind?
Debatindlæg | Læs Politikens mange forskellige debatindlæg. Det enkelte indlæg er udtryk for skribentens holdning. Du kan også få bragt dit debatindlæg.
https://politiken.dk/debat/debatindlaeg/art10618843/Hvor-slemt-skal-det-blive-f%C3%B8r-politikerne-griber-ind?shareToken=1NeIxDAFaAnA
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reposted by
Anna Brüniche-Olsen
Laura Bertola
about 2 months ago
New publication out, highlighting the link between genetic diversity (GD) and policy! 🧬📜 "Conserving genetic diversity in accordance with the Global Biodiversity Framework"
www.annualreviews.org/content/jour...
We summarize the highlights in this thread. 🧵
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Conserving Genetic and Genomic Diversity in Accordance with the Global Biodiversity Framework
Adopted in December 2022, the Kunming–Montreal Global Biodiversity Framework (KMGBF) under the Convention on Biological Diversity outlines a visionary road map guiding humanity's relationship wit...
https://www.annualreviews.org/content/journals/10.1146/annurev-animal-030424-070756
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reposted by
Anna Brüniche-Olsen
Patrícia Pečnerová
2 months ago
All those questions about inbreeding in conservation that you were afraid to ask. A bunch of early career scientists is here to explain something that even Wright and Fisher couldn't agree on, the (not so) simple question of what is inbreeding.
link.springer.com/article/10.1...
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Q&A: inbreeding and its implications for conservation - BMC Biology
Inbreeding depression plays a role in the decline, endangerment, and extinction of small populations, and thus inbreeding has received much attention in conservation biology. The term inbreeding is us...
https://link.springer.com/article/10.1186/s12915-025-02386-6
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reposted by
Anna Brüniche-Olsen
Anja Westram
3 months ago
🧬 Interested in monitoring & reporting on genetic diversity? 🏞️ Our project GINAMO (Genetic Indicators for NAture MOnitoring) now has a blog & newsletter! 🐝 Please share!
ginamo.org/2025/09/29/welcome-2
#Conservation
#Genetics
#Biodiversity
#Nature
#consgen
#KMGBF
#SciComm
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Welcome!
Get to know GINAMO in 10 questions Welcome to the GINAMO (Genetic Indicators for NAture MOnitoring) blog! Whether you’ve already attended one of our workshops or are just discovering us, we&#…
https://ginamo.org/2025/09/29/welcome-2
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reposted by
Anna Brüniche-Olsen
Journal of Evolutionary Biology
3 months ago
Evidence for ancient
#selectivesweeps
followed by differentiation among three species of
#Sphyrapicus
#sapsuckers
,” by Libby Natola and
@darrenirwin.bsky.social
:
doi.org/10.1093/jeb/...
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Evidence for ancient selective sweeps followed by differentiation among three species of Sphyrapicus sapsuckers
Abstract. Genomic differentiation usually accompanies speciation, but that differentiation is often highly heterogeneous across the genome. Understanding w
https://doi.org/10.1093/jeb/voaf096
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reposted by
Anna Brüniche-Olsen
Daniel Ortiz-Barrientos
3 months ago
Excited to share our new paper in @GeneticsGSA ! We developed "Retriever," a novel method that enables high-quality genotype imputation in non-model organisms. 🧬 Congratulations to Charles on his first PhD paper! Paper:
doi.org/10.1093/gene...
A thread 🧵👇
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Chimeric Reference Panels for Genomic Imputation
Abstract. Despite transformative advances in genomic technologies, missing data remains a fundamental constraint that limits the full potential of genomic
https://doi.org/10.1093/genetics/iyaf212
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reposted by
Anna Brüniche-Olsen
Laura Bertola
3 months ago
African lion conservation requires adaption to regional anthropogenic threats and mitigation capacity
www.sciencedirect.com/science/arti...
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reposted by
Anna Brüniche-Olsen
Brian J. Enquist
3 months ago
Genomic divergence across the tree of life 🧪🌐https://www.pnas.org/doi/10.1073/pnas.2319389122
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Genomic divergence across the tree of life | PNAS
Nucleotide sequence data are being harnessed to identify species, even in cases in which organisms themselves are neither in hand nor witnessed. Bu...
https://www.pnas.org/doi/10.1073/pnas.2319389122
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reposted by
Anna Brüniche-Olsen
Corrie Moreau
4 months ago
UPDATE: The 2025-2026 list of faculty and postdoc positions in ecology and evolutionary biology is out! Be sure to check out this active and helpful community run resources!
docs.google.com/spreadsheets...
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ecoevojobs.net 2025-26
https://docs.google.com/spreadsheets/d/1P7BfU0emdcGFVIWIs_erFxyy0UGXXORw7h0rpU19gQ8/edit?gid=1219796980#gid=1219796980
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reposted by
Anna Brüniche-Olsen
Laura Bertola
4 months ago
Evolutionary consequences of extreme climate events
www.cell.com/current-biol...
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Evolutionary consequences of extreme climate events
Simon Baeckens and Colin Donihue review case studies of rapid evolutionary change in response to extreme climate events and sketch a framework for future studies in the rapidly changing climate of the...
https://www.cell.com/current-biology/fulltext/S0960-9822(25)00955-8
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reposted by
Anna Brüniche-Olsen
Mick Westbury
4 months ago
🦣🍖🧬 Fully funded 3-yr PhD in palaeogenomics & bioinformatics! Help me push non-model palaeogenomes beyond their limits @DTU in Denmark. Start: Feb 2026 (flexible) Application deadline: 24 Oct 2025 For details click here:
tinyurl.com/BioExtPhD
Reposts appreciated 😁
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🐢🧬 New paper on how climate shifts shaped turtle and tortoise populations over time 🐢🧬 Using whole genome sequencing and environmental niche modeling we reconstruct demographic history and suitable habitat for turtles and tortoises 🧵
#popgen
#consgen
doi.org/10.1111/1755...
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Quaternary Habitat Fluctuations and Demographic Dynamics in Turtles Inferred From Environmental Niche Modelling and Whole Genome Data
Quaternary climatic fluctuations had a substantial influence on ecosystems, species distribution, phenology and genetic diversity, driving extinction, adaptation and demographic shifts during glacial...
https://doi.org/10.1111/1755-0998.70040
4 months ago
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reposted by
Anna Brüniche-Olsen
Hui Zhen Tan
4 months ago
Genomic imputation can boost dataset quality and benefit research on wild populations. In hihi, we found high
#imputation
accuracies despite a small reference panel of high-fecundity individuals. Imputation improves downstream
#ConservationGenomics
analyses.
onlinelibrary.wiley.com/doi/10.1111/...
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High Imputation Accuracy Can Be Achieved Using a Small Reference Panel in a Natural Population With Low Genetic Diversity
Genotype imputation, the inference of missing genotypes using a reference set of population haplotypes, is a cost-effective tool for improving the quality and quantity of genetic datasets. Imputation...
https://onlinelibrary.wiley.com/doi/10.1111/1755-0998.70024
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reposted by
Anna Brüniche-Olsen
Laura Bertola
4 months ago
Sparse genetic data limit biodiversity assessments in protected areas globally
esajournals.onlinelibrary.wiley.com/doi/10.1002/...
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Sparse genetic data limit biodiversity assessments in protected areas globally
Global conservation targets include protecting genetic diversity within species. Yet few studies have assessed whether protected areas (PAs) include genetically diverse populations across species glo....
https://esajournals.onlinelibrary.wiley.com/doi/10.1002/fee.2867
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reposted by
Anna Brüniche-Olsen
Marty Kardos
4 months ago
www.pnas.org/doi/full/10....
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Inbreeding reduces fitness in spatially structured populations of a threatened rattlesnake | PNAS
Small and fragmented populations are at high risk of local extinction, in part because of elevated inbreeding and subsequent inbreeding depression....
https://www.pnas.org/doi/full/10.1073/pnas.2501745122
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reposted by
Anna Brüniche-Olsen
Aryn Wilder
4 months ago
Excited to share our new paper on genetic rescue in the Pacific pocket mouse! To conserve this endangered species, we sought to understand whether small populations at risk of outbreeding depression are better managed in isolation or with gene flow.
@science.org
www.science.org/doi/10.1126/...
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Fitness benefits of genetic rescue despite chromosomal differences in an endangered pocket mouse
Two-thirds of Earth’s species have undergone population declines, leaving many vulnerable to genomic erosion and inbreeding depression. Genetic rescue can boost the fitness of small populations, but p...
https://www.science.org/doi/10.1126/science.adn4666
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reposted by
Anna Brüniche-Olsen
Evolutionary Applications
5 months ago
Alexander Archipelago wolves (Canis lupus ligoni) on Prince of Wales Island show high inbreeding, similar to endangered Isle Royale wolves. Genomic data reveals smaller population size & recent mating between relatives. These results can be used for conservation 🐺
doi.org/10.1111/eva.70144
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Why Sex-Based Genomic Differentiation Should Not Be Overlooked in Population Genetics
onlinelibrary.wiley.com/doi/full/10....
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Opinion: Why Sex‐Based Genomic Differentiation Should Not Be Overlooked in Population Genetics
Sex-specific genomic differentiation is a crucial yet frequently overlooked factor in population genetics. In this opinion piece, we leverage the substantial genomic resources available for the great...
https://onlinelibrary.wiley.com/doi/full/10.1111/mec.70061?campaign=wolearlyview
5 months ago
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reposted by
Anna Brüniche-Olsen
Moi Expósito-Alonso (MOILAB)
5 months ago
*ALERT! GLOBAL GENETIC DIVERSITY TREND RE-ANALYSIS* "Signals of consistent genetic diversity decline are not yet measurable in global meta-analysis"
doi.org/10.1101/2025...
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Long runs of homozygosity are reliable genomic markers of inbreeding depression 🧬
www.cell.com/trends/ecolo...
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Long runs of homozygosity are reliable genomic markers of inbreeding depression
A long-standing goal in ecological, evolutionary, and conservation genetics is to identify genomic correlates of fitness and inbreeding depression. Over the past several years, a growing body of theor...
https://www.cell.com/trends/ecology-evolution/fulltext/S0169-5347%2825%2900182-X
5 months ago
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reposted by
Anna Brüniche-Olsen
Laura Bertola
5 months ago
Genetic rescue of Florida panthers reduced homozygosity but did not swamp ancestral genotypes
www.pnas.org/doi/10.1073/...
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Genetic rescue of Florida panthers reduced homozygosity but did not swamp ancestral genotypes | PNAS
Pumas (Puma concolor) occupy a vast geographical range spanning from Canada to Argentina. Due to urbanization and unregulated hunting, pumas in Flo...
https://www.pnas.org/doi/10.1073/pnas.2410945122
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Biodiversity Genomics Research Practices Require Harmonising to Meet Stakeholder Needs in Conservation 🧬
#popgen
#consgen
onlinelibrary.wiley.com/doi/full/10....
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Biodiversity Genomics Research Practices Require Harmonising to Meet Stakeholder Needs in Conservation
Biodiversity resilience relies on genetic diversity, which sustains the evolutionary potential of organisms in dynamic ecosystems. Genomics is a powerful tool for accurately estimating genetic divers...
https://onlinelibrary.wiley.com/doi/full/10.1111/mec.70001
5 months ago
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reposted by
Anna Brüniche-Olsen
Jente Ottenburghs | Avian Hybrids
5 months ago
Your daily Avian Hybrids story! Genomics on the Galapagos: Exploring the genetic diversity of Darwin’s Finches and their relatives
avianhybrids.wordpress.com/2020/01/27/g...
#ornithology
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Genomics on the Galapagos: Exploring the genetic diversity of Darwin’s Finches and their relatives
Can we use the knowledge on genomic diversity to inform conservation?
https://avianhybrids.wordpress.com/2020/01/27/genomics-on-the-galapagos-exploring-the-genetic-diversity-of-darwins-finches-and-their-relatives/
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Accounting for population structure and data quality in demographic inference with linkage disequilibrium methods
www.nature.com/articles/s41...
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Accounting for population structure and data quality in demographic inference with linkage disequilibrium methods - Nature Communications
Accurate estimation of effective population size is critical for understanding population history but is often confounded by structure and data quality. Here, the authors show that GONE2 and currentNe...
https://www.nature.com/articles/s41467-025-61378-w
6 months ago
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Come join us 🧬💻
#popgen
#consgen
add a skeleton here at some point
6 months ago
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Come join us 🧬🦜
#popgen
#consgen
add a skeleton here at some point
6 months ago
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reposted by
Anna Brüniche-Olsen
ERGA - European Reference Genome Atlas
6 months ago
📢 It’s time to harmonise practices for assessing genome-wide genetic diversity 🧬 Standardisation is key to meet the needs of stakeholders in biodiversity
#conservation
. 🔗 New publication by
#ERGA
@biogeneurope.bsky.social
out now in
#MolecularEcology
onlinelibrary.wiley.com/doi/10.1111/...
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Biodiversity Genomics Research Practices Require Harmonising to Meet Stakeholder Needs in Conservation
Biodiversity resilience relies on genetic diversity, which sustains the evolutionary potential of organisms in dynamic ecosystems. Genomics is a powerful tool for accurately estimating genetic divers...
https://onlinelibrary.wiley.com/doi/10.1111/mec.70001
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reposted by
Anna Brüniche-Olsen
David Nogués Bravo
6 months ago
Would you like to come to work with us here at @Macroecology ? The Center is opening six new positions!
macroecology.ku.dk/people/posit...
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Open Positions
Positions and vacancies at the Center for Macroecology, Evolution and Climate
https://macroecology.ku.dk/people/positions/
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The future of baleen whales: Recoveries, environmental constraints, and climate change 🐋
www.science.org/doi/10.1126/...
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The future of baleen whales: Recoveries, environmental constraints, and climate change
As the great whales recover from commercial whaling, major mortality events may become more frequent.
https://www.science.org/doi/10.1126/sciadv.adv8031
6 months ago
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reposted by
Anna Brüniche-Olsen
bioRxiv Evolutionary Biology
6 months ago
Combining multiple genetic estimates of Ne
https://www.biorxiv.org/content/10.1101/2025.06.26.661823v1
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A Guide for Developing Demo-Genetic Models to Simulate Genetic Rescue 🧬
#popgen
#consgen
onlinelibrary.wiley.com/doi/10.1111/...
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A Guide for Developing Demo‐Genetic Models to Simulate Genetic Rescue
Genetic rescue is a conservation management strategy that reduces the negative effects of genetic drift and inbreeding in small and isolated populations. However, such populations might already be vu...
https://onlinelibrary.wiley.com/doi/10.1111/eva.70092
7 months ago
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reposted by
Anna Brüniche-Olsen
Rob Waterhouse
7 months ago
A great collection of papers here ...
onlinelibrary.wiley.com/toc/17550998...
Special Issue: Advancing species conservation and management through omics tools
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Special Issue: Advancing species conservation and management through omics tools: Molecular Ecology Resources: Vol 25, No 5
Molecular Ecology Resources is a broad journal publishing computer programs, statistical & molecular advances & more for studies in evolution, ecology & conservation.
https://onlinelibrary.wiley.com/toc/17550998/2025/25/5
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GenDivRange: A global dataset of geo-referenced population genetic diversity across species ranges
#popgen
#consgen
www.nature.com/articles/s41...
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GenDivRange: A global dataset of geo-referenced population genetic diversity across species ranges - Scientific Data
Scientific Data - GenDivRange: A global dataset of geo-referenced population genetic diversity across species ranges
https://www.nature.com/articles/s41597-025-05303-2
7 months ago
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The Genomic Signature of Demographic Decline in a Long-Distance Migrant in a Range-Extreme Population 🪶🧬 Molecular Ecology | Molecular Genetics Journal | Wiley Online Library
onlinelibrary.wiley.com/doi/10.1111/...
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The Genomic Signature of Demographic Decline in a Long‐Distance Migrant in a Range‐Extreme Population
Migratory birds are inherently vagile, a strategy that may reduce the impacts of habitat loss and fragmentation on genetic diversity. However, specialist resource requirements and range-edge distribu...
https://onlinelibrary.wiley.com/doi/10.1111/mec.17805
7 months ago
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Population genomics of recovery and extinction in Hawaiian honeycreepers: Current Biology
www.cell.com/current-biol...
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Population genomics of recovery and extinction in Hawaiian honeycreepers
Kyriazis et al. present a genomic analysis of two critically endangered and one extinct Hawaiian honeycreeper. High genomic diversity in Hawaiian honeycreepers may contribute to severe inbreeding depr...
https://www.cell.com/current-biology/fulltext/S0960-9822%2825%2900575-5
7 months ago
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reposted by
Anna Brüniche-Olsen
Population and Statistical Genetics Group at UCPH
7 months ago
Just a few more days left to sign up for the EPIC conference 2025! Join us in Aarhus this August 🥳 ✍️Registration deadline for talk/poster: 1st June 2025 ✍️Registration deadline for attendance : 31st July 2025
#EPICdk25
add a skeleton here at some point
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reposted by
Anna Brüniche-Olsen
Laura Bertola
7 months ago
Combining Spatial, Genetic, and Environmental Risk Data to Define and Prioritize In Situ Conservation Units
onlinelibrary.wiley.com/doi/10.1002/...
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Combining Spatial, Genetic, and Environmental Risk Data to Define and Prioritize In Situ Conservation Units
This study develops a flexible framework for in situ conservation using clustering algorithms (DBSCAN and k-means) to define management units while considering resource constraints. It integrates gen...
https://onlinelibrary.wiley.com/doi/10.1002/ece3.71251?af=R
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reposted by
Anna Brüniche-Olsen
Global Change Biology
8 months ago
Mammals on the Margins: Identifying the Drivers and Limitations of Range Expansion 🔗
buff.ly/Dhmwwng
@rolandkays.com
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reposted by
Anna Brüniche-Olsen
Jorts (and Jean)
8 months ago
A team of geneticists have determined why we are orange. It’s because some boring parts of our DNA got holes in it so the awesome can shine out. At least that’s my interpretation
gizmodo.com/orange-you-g...
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Orange You Glad We Finally Figured Out Why Some Cats Are Ginger
New research identifies a unique mutation found only in cats that explains their orangeness.
https://gizmodo.com/orange-you-glad-we-finally-figured-out-why-some-cats-are-ginger-2000602733
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Variation in adult sex ratios in tetrapods is linked to sex chromosomes through mortality differences between males and females
doi.org/10.1371/jour...
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Variation in adult sex ratios in tetrapods is linked to sex chromosomes through mortality differences between males and females
Across tetrapods, ZZ/ZW sex-determination systems are associated with a more male-skewed adult sex ratio than XY/XX systems. Phylogenetic analyses of a large dataset from tetrapod species in the wild ...
https://doi.org/10.1371/journal.pbio.3003156
8 months ago
0
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reposted by
Anna Brüniche-Olsen
Center for Biological Diversity
8 months ago
Calling all scientists! There's less than one week left to boost support to protect endangered species' habitat safeguards in the Endangered Species Act. Sign on to the scientists' open sign-on letter here and please share:
biodiv.us/4mojih5
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Scientists' Letter in Opposition to Rescinding the Regulatory Definition of “Harm” in Endangered Species Act Regulations
May 19, 2025 Submitted via: https://www.regulations.gov/commenton/FWS-HQ-ES-2025-0034-0001 Public Comments Processing Attn: FWS-HQ-ES-2025-0034 U.S. Fish and Wildlife Service, MS: PRB/3W 5275 Leesbu...
https://biodiv.us/4mojih5
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