Oleksandra Sasha Fanari
@sashafanari.bsky.social
📤 10
📥 32
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PhD Candidate in BIOE at Northeastern University RNA ~ RNA mods ~ pseudouridine
reposted by
Oleksandra Sasha Fanari
Sara Rouhanifard
6 months ago
1/6 🧬New paper at
@cp-cellsystems.bsky.social
led by
@sashafanari.bsky.social
! Does pseudouridine (Ψ) dynamically respond to cell state? We used nanopore DRS + Mod-p ID to map Ψ in neuron-like cells under “normal” and “perturbed” conditions (healthy differentiation and unhealthy Pb2+ poisoning).
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reposted by
Oleksandra Sasha Fanari
GenomeTDCC
7 months ago
🧪🧬👩🔬🖥️ Do immortalized cells have a different RNA modification profile compared to primary cells? 🤔
@sashafanari.bsky.social
@wanunupore.bsky.social
@srouhanifard.bsky.social
assess the most abundant RNA modification, pseudouridine, in primary and immortalized human T cells 👇
doi.org/10.1101/2025...
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Direct RNA sequencing of primary human T cells reveals the impact of immortalization on mRNA pseudouridine modifications.
Immortalized cell lines are commonly used as proxies for primary cells in human biology research. For example, Jurkat leukemic T cells fundamentally contributed to uncovering T cell signaling, activat...
https://doi.org/10.1101/2025.03.02.641090
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reposted by
Oleksandra Sasha Fanari
bioRxiv Genomics
7 months ago
Direct RNA sequencing of primary human T cells reveals the impact of immortalization on mRNA pseudouridine modifications.
https://www.biorxiv.org/content/10.1101/2025.03.02.641090v1
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Oleksandra Sasha Fanari
Randall Munroe
7 months ago
RNA
xkcd.com/3056
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