Maria Akopyan, PhD
@akopyan.bsky.social
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evolutionary genomics | ๐ธ๐๐ฆ๐งฌ | ๐บ๐ธ๐ฆ๐ฒ | she/her
reposted by
Maria Akopyan, PhD
1 day ago
Excited to recruit a new PhD student for Fall 2026 in my lab at Cornell! Looking for someone interested in evolutionary genomics + fisheries/conservation applications. Quick timeline this yearโreach out soon. More details:
www.therkildsenlab.org/join-us.html
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Join Us
The lab of Nina Overgaard Therkildsen in the Department of Natural Resources and the Environment at Cornell University invites applications for a PhD position starting in Fall 2026. Our group works...
https://www.therkildsenlab.org/join-us.html
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Now published in Cell! We found that ~15% of SNPs from divergent refs did not liftover as SNPs in the gray fox refโhalf mapped to monomorphic sites, half failed to map. Co-authored with Matthew Genchev,
@elliecat.bsky.social
, and
@jazlynmooney.bsky.social
www.sciencedirect.com/science/arti...
add a skeleton here at some point
about 2 months ago
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reposted by
Maria Akopyan, PhD
Meaghan Clark
3 months ago
Thrilled to have a new paper out where we use 12+ years of monitoring data to document the impacts of inbreeding on fitness in eastern massasauga rattlesnakes!
www.pnas.org/doi/10.1073/...
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Inbreeding reduces fitness in spatially structured populations of a threatened rattlesnake | PNAS
Small and fragmented populations are at high risk of local extinction, in part because of elevated inbreeding and subsequent inbreeding depression....
https://www.pnas.org/doi/10.1073/pnas.2501745122
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Iโve been meaning to write this for a whileโฆ but ADHD ๐ I finally did! Itโs about creating academic spaces that actually work for people with ADHD. If it resonates, Iโd love to connect or hear your thoughts.
www.insidehighered.com/opinion/care...
#ADHD
#Neurodiversity
#HigherEd
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How to Create an ADHD Academic Community (opinion)
Maria Akopyan writes that a grad school ADHD group became a career-spanning lifeline.
https://www.insidehighered.com/opinion/career-advice/2025/07/23/how-create-adhd-academic-community-opinion
4 months ago
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reposted by
Maria Akopyan, PhD
Julia Van Etten
6 months ago
On this weekโs ep, Kevin Bird (
@stairwaytokevin.bsky.social
) explains the events of the last 3 months, how science is funded in the United States, why it is being attacked so aggressively, and the ideologies behind these attacks. Found everywhere you get podcasts.
open.spotify.com/episode/0E9l...
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Is science political? - with Kevin Bird
Tiny Living Beings ยท Episode
https://open.spotify.com/episode/0E9lty4kSs1UmcR6wKdfmE?si=RlRhlc1RSpuCjJYSwCdBQg
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reposted by
Maria Akopyan, PhD
Molecular Biology and Evolution
6 months ago
@akopyan.bsky.social
et al. analysed 168 genomes of Atlantic silverside, showing that high gene flow leads to clustered divergence in large inversions, while low recombination at centromeres mimics differentiation. ๐
doi.org/10.1093/molb...
#evobio
#molbio
#inversions
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Genetic Differentiation is Constrained to Chromosomal Inversions and Putative Centromeres in Locally Adapted Populations With Higher Gene Flow
Abstract. The impact of genome structure on adaptation is a growing focus in evolutionary biology, revealing an important role for structural variation and
https://doi.org/10.1093/molbev/msaf092
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Excited to share our new paper on genetic differentiation in Atlantic silversides! We investigated how genome structure influences adaptation under varying levels of gene flow using a species-specific reference genome and multiple recombination maps. Read on for insights!
doi.org/10.1093/molb...
1/7
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Genetic differentiation is constrained to chromosomal inversions and putative centromeres in locally adapted populations with higher gene flow
Abstract. The impact of genome structure on adaptation is a growing focus in evolutionary biology, revealing an important role for structural variation and
https://doi.org/10.1093/molbev/msaf092
7 months ago
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1/7 ๐งฌ New Preprint Alert: Our study highlights the risks of using divergent reference genomes in population genomics. The choice of reference genome can skew key inferences about demography, diversity, and selection. Read on for insights!
www.biorxiv.org/content/10.1...
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Divergent reference genomes compromise the reconstruction of demographic histories, selection scans, and population genetic summary statistics
Characterizing genetic variation in natural populations is central to evolutionary biology. However, most non-model organisms lack integral genomic resources such as reference genomes and recombinatio...
https://www.biorxiv.org/content/10.1101/2024.11.26.625554v1
12 months ago
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