Claire Mérot
@clairemerot.bsky.social
📤 585
📥 618
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CNRS Researcher - France - Europe Evolutionary Biology - Genomics - Ecology
pinned post!
We hope this little guide and review of the recent literature on SVs will be useful for the community in
#ecology
#evolution
#genomics
#PopGen
. Great lead by Kat!!
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6 months ago
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Claire Mérot
STRIVE
7 days ago
🖥️🧬 Entering the final stretch at TIBE-STRIVE! Kicking off the last session of the congress with a Mini Plenary: 🗣️ Katarina Stuart 🔬 "Structural variants and transposable elements under weakened selection in invasive populations" 🐦🐦⬛ #TIBESTRIVE
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tibe.strive
8 days ago
Two days of the conference have already gone by. Talks, discussions, and new ideas, all accompanied by a spirit of collaboration. We keep going, tomorrow is the final day! 📸 Photos: CIBIO Communication Office
@eseb.bsky.social
@strivestn.bsky.social
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STRIVE
8 days ago
Welcome to Day 2 of TIBE-STRIVE! 🌅🧬 We are kicking things off with an incredible Plenary Talk: 🗣️ Joana Meier 🔬 "Structural variation facilitating speciation in butterflies and spiders" Excited to learn how structural variants drive the incredible diversity in these lineages! 🦋🕷️ #TIBESTRIVE
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STRIVE
8 days ago
Wrapping up the scientific sessions for today at TIBE-STRIVE with some massive discussion topics! 🗣️🧬 We are brainstorming ay the discussion sessions. Can't wait to see what ideas come out of this before we head out to explore Vila do Conde! 🌊🏛️ #TIBESTRIVE
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Very excited by the first day of the kick off meeting of our special topic network on Structural Variants in evolution ! Joint meeting with TiBE by CIBIO. Thanks to the organisers!!!
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9 days ago
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If you are interested in genotyping inversion, here is a new tool using linked reads. Developed with C Lemaitre by our co-supervised PhD student, M Temperville
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9 days ago
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Great talk by
@janawold.bsky.social
Looking forward to the upcoming discussion about SV & pangenomes
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9 days ago
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STRIVE
9 days ago
Up next at TIBA STRIVE! 🌿🧬 Tuning in to the Mini Plenary: 🗣️ Ashwini V Mohan 🔬 "Genomic rearrangements underlie barriers to recombination in holocentric sedges" A deep dive into plant genomics and the fascinating chromosome dynamics of these unique species! #TIBASTRIVE
#Genomics
#PlantScience
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Claire Mérot
STRIVE
9 days ago
Engaging and highly scannable Keeping the momentum going at TIBA STRIVE! 🧬⚡ Now up: 🗣️ Alistair Hockey 🔬 "Massive genomic flux and rapid differentiation in a young autogamous diploid" Excited to hear about these rapid evolutionary shifts and genomic dynamics! #TIBASTRIVE
#EvolutionaryBiology
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Claire Mérot
STRIVE
9 days ago
The science continues at TIBA STRIVE! 🪰🧬 Now hearing from: 🗣️ Léa Nicolas 🔬 "Evolutionary consequences of recombination suppression: the case of a chromosomal inversion in the seaweed fly" A fascinating look at how chromosomal inversions shape evolutionary trajectories! 🌊 #TIBASTRIVE
#Evolution
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Claire Mérot
STRIVE
9 days ago
Next up at the TIBA STRIVE is Carina Mugal: Population-level PacBio HiFi data enable the investigation of structural variants in the speciation process of two songbirds. A great look into how advanced sequencing technology helps us understand structural variation in evolution. 🧬🐦 #TIBASTRIVE
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STRIVE
9 days ago
Next up at
#TIBASTRIVE
! 🌳 Desanka Lazić presents "A graph-based pangenome of European beech (Fagus sylvatica) reveals the landscape of structural variation across the distribution range." 🧬 Mapping structural variations of the European beech across the continent today!
#TIBASTRIVE
#Evolution
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STRIVE
9 days ago
Diving into the bioinformatics at TIBE-STRIVE! 💻🧬 Now presenting: 🗣️ Claire Lemaitre 🔬 "Representation and detection of inversions in pangenome graphs" Excited to learn about new computational methods for capturing complex structural variations! 📊 #TIBASTRIVE
#Pangenome
#Bioinformatics
#Genomics
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STRIVE
9 days ago
Continuing the bioinformatics sessions at TIBE-STRIVE! 💻🧬 Now presenting: 🗣️ Mélody Temperville 🔬 "SVJedi-Tag: a novel method for genotyping large inversions with linked-read data" Looking forward to learning about this new methodological approach to structural variant genotyping! 📊 #TIBESTRIVE
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STRIVE
9 days ago
Still going strong at TIBE-STRIVE! 🧬 Now hearing from: 🗣️ Jana Wold 🔬 "The good, the bad, and the complex: Characterizing structural variants using genome graphs" Excited for this deep dive into the intricacies of mapping complex structural variation! 📊 #TIBESTRIVE
#Bioinformatics
#GenomeGraphs
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Thanks
#SMBE2026
!! We had a wonderful conference, so many exciting talks! Our SVs & seaweed flies research was well represented
#proudPI
😇 🙏 And I very much look forward to next year in our dear Québec 🩵🤍
15 days ago
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Claire Mérot
Nadia Aubin-Horth
15 days ago
Nicolas Galtier
@nicolasgaltier.bsky.social
is presenting the hidden costs of the current publishing system and the DAFNEE initiative, which includes a list of more ethical journals
#SMBE2026
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Looking forward to the first meeting of our special topic network (STN by
@eseb.bsky.social
) in Portugal next week!!
#Evolution
#StructuralVariants
@strivestn.bsky.social
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18 days ago
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Claire Mérot
Adria LeBoeuf
19 days ago
Wise words about the ethics of being a scientist these days from
@meauxjuliette.bsky.social
#SMBE2026
: “Don’t serve the system, serve the community.” Also, it is ok (and healthy!) to feel like an imposter; rather, finding others smarter is a blessing!
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Pavel Dimens
20 days ago
10 on-and-off months of learning
#Golang
later, I seem to have gotten my fork of the Lariat linked-read aligner, Arachne, working. If you got modern linked read data, I'd love for you to try it out and report back!
#bioinformatics
https://pdimens.github.io/arachne/
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Arachne linked-read aligner | Arachne
Arachne is a fork intended to be a revival and [hopefully] continuation of Lariat, the linked-read aware aligner created by 10X Genomics and bundled in their LongRanger pipeline.
https://pdimens.github.io/arachne/
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+1 👇👇
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about 1 month ago
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Claire Mérot
Anna Hewett
about 1 month ago
📣 New paper out in ProcB📣 ... and we're on the cover! (Perks of having a beautiful study species) Find it here:
royalsocietypublishing.org/rspb/article...
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Inbreeding depression in morphological and growth traits of wild barn owls (Tyto alba)
Abstract. Despite its detrimental effects, inbreeding depression in wild populations is relatively under-explored. Here, we use whole-genome sequence data
https://royalsocietypublishing.org/rspb/article/293/2070/20252708/481566/Inbreeding-depression-in-morphological-and-growth
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Alice Boyle
about 1 month ago
#NewPaperAlert
! This one has a massive author list and has been a LONG time in coming, but is SO COOL! First, check out the first figure to get you interested! Manakins! Fruit! Sexual-selection in action (displays and Z:A chromosomal diversity)! Read on for the back story & link 1/n
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Earth BioGenome Project 🌍
about 1 month ago
🦥🧬 What can sloth genomes teach us about evolution? New chromosome-level genomes from sloths and anteaters are helping researchers study xenarthrans — one of the most distinctive branches of the mammalian tree. 📖 Read the press release:
tinyurl.com/3n62vy4v
@sangerinstitute.bsky.social
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Charles Mullon
about 2 months ago
New paper with the brilliant
@ewanflintham.bsky.social
How fast does recombination suppression evolve among sex chromosomes? We show that even weak sexual antagonism (so hard to detect) makes this fast, often via inversions fixing on X/Z depending on mating system:
doi.org/10.1093/evle...
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This Wednesday! Looking forward to hearing more about
@aruizherrera.bsky.social
's research. 🧬
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about 2 months ago
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Looking forward to our next STRiVE seminar by
@aruizherrera.bsky.social
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about 2 months ago
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Looking forward to the first of our seminar series. Tomorrow!
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3 months ago
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Claire Mérot
SEAGEN - Rui Faria
3 months ago
2 plenary, 3 mini-plenaries, 27 regular talks and many posters in our awsome conference on the evolutionary role of structural variation . Deadline for registration (30 of April) is approaching fast. Do not miss this opportunity.
tibe.biopolis.pt
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Denis Duboule
3 months ago
This year, the annual symposium of my Chaire
@college-de-france.fr
will be on The Evolution of Developmental Mechanisms. An impressive lineup of speakers and weirds animals, including humans. Free entrance and coffee breaks. Come, have a seat, relax and enjoy the best possible basic science🤘RT🙏
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STRIVE
4 months ago
🧬 Join the STRiVE kick-off conference (TiBE-STRiVE) July 8-10, 2026, near Porto! Abstracts & Registration are now open to EVERYONE. 🔹 Abstracts due: Apr 15 🔹 Registration closes: Apr 30 Info:
structuralvariantsstn.github.io/porto_about/
#Evolution
#Genomics
#Biology
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Looking forward to kicking off the seminar series of our special topic network on structural variants
#SV
in evolutionary biology.
@eseb.bsky.social
Join us in listening to Pr. Rieseberg on April 29
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3 months ago
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I couldn't agree more, don't be shy, reach out to your favourite lab(s) and take a chance! Best of luck to all applicants
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3 months ago
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Claire Mérot
José Cerca
4 months ago
We just published a review 🗞️😁: ‘The ecology of adaptive radiation’ revisited: A 25-year reflection Dolph Schluter’s book inspired the interest in adaptive radiation, and we wanted to revisit it.
academic.oup.com/evolinnean/a...
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Claire Mérot
Pint of Science FR
4 months ago
🎉ÇA Y EST !! Le programme
#pint26
est en ligne dans (presque) toutes les villes. 👉
pintofscience.fr
🎫 Ouverture de la billetterie lundi 13 avril à 8h, vous avez deux semaines pour repérer vos soirées préférées ! 📅 Festival du 18 au 20 mai 2026. 👓🧠 Alors, quelle soirée vous tente le plus?
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Thomas Lesaffre 🌱
4 months ago
🚨 PhD position available ! 🚨 I am hiring a PhD student to work with me on the evolution of plant sexual systems 🌺 at
@unifrbiology.bsky.social
! The position is funded for 4 years by
@snsf.ch
as part of my Ambizione fellowship. More info here:
tinyurl.com/monoecy
🌱 Please RP and share widely ! 🌱
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Claire Mérot
STRIVE
4 months ago
🧬 Join the STRiVE kick-off conference (TiBE-STRiVE) July 8-10, 2026 near Porto! Registration & abstracts open: 🔹 Members: Feb 25-Apr 7 🔹 Non-members: Mar 16-Apr 7 Info:
structuralvariantsstn.github.io/porto_about/
#Evolution
#Genomics
#Biology
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Claire Mérot
4 months ago
Proud to see this paper from
@akopyan.bsky.social
's PhD published in Science, with co-first author
@fishyomics.bsky.social
Silversides adapt across a steep temperature gradient through multiple chromosomal inversions that maintain continuous trait variation rather than simple ecotype switches
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Many thanks to Popgroup and Heredity for this opportunity to chat about our research.
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5 months ago
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Claire Mérot
Charlotte Wright
5 months ago
Now online! In this review, we cover four major topics on butterflies and moths: their evolutionary history and diversification dynamics, genomics, global diversity patterns, and conservation 🦋🌏 (1/8)
@natrevbiodiv.nature.com
www.nature.com/articles/s44...
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Evolution, genomics and conservation of butterflies and moths - Nature Reviews Biodiversity
Butterflies and moths are key indicators of functioning and healthy ecosystems around the world. This Review describes the evolutionary history of the order Lepidoptera and tracks shifts in researcher...
https://www.nature.com/articles/s44358-025-00128-8
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STRIVE
5 months ago
🧬We are launching STRiVE, a
@eseb.bsky.social
Special Topic Network on the evolutionary role of structural genomic variation. 🗓️Std: 29/04: Online seminar w/ L. Rieseberg 8-10/07: Kick-off in Porto Join us:
structuralvariantsstn.github.io
#Evolution
#Genomics
#StructuralVariants
#Biology
#PopGen
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Structural Variants ESEB Special Topic Network
ESEB Special Topic Network
https://structuralvariantsstn.github.io/
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Claire Mérot
Journal of Evolutionary Biology
5 months ago
CALL FOR PAPERS 📣 Special Issue:
#GenomeArchitecture
and
#Evolution
, organised by
@eseb.bsky.social
STN "STRiVE": Find out more here:
tinyurl.com/2uza525c
@ruifaria.bsky.social
@kaybiodiversity.bsky.social
@clairemerot.bsky.social
@petrnguyen.bsky.social
@aruizherrera.bsky.social
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Claire Mérot
Journal of Evolutionary Biology
6 months ago
Responsible publication of your research! To help you do this
@nicolasgaltier.bsky.social
and coauthors have put together a handy database of academia-friendly journals, DAFNEE. You can read about it in their article recently published in
@jevbio.bsky.social
:
doi.org/10.1093/jeb/...
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Time to publish responsibly: DAFNEE, a database of academia-friendly journals in ecology and evolutionary biology
Abstract. The current economics of scientific publishing reveal a profound imbalance: academia pays prices far exceeding the actual costs of publication. R
https://doi.org/10.1093/jeb/voaf143
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Dr Mark E Hauber
7 months ago
www.cell.com/trends/ecolo...
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Pangenomes: new tools for ecological and evolutionary genomics
Genomic structural variation is an important component of genetic variation in natural populations. By assembling and analyzing multiple high-quality genomes within a species or clade, pangenomes capt...
https://www.cell.com/trends/ecology-evolution/abstract/S0169-5347(25)00344-1?rss=yes
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Max Reuter
6 months ago
A new preprint from the lab, with postdoc
@deboraycb.bsky.social
and collaborators
@aidaandres.bsky.social
and Tim Connallon: “Characterising the detectable and invisible fractions of genomic loci under balancing selection”
www.biorxiv.org/content/10.6...
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https://www.biorxiv.org/content/10.64898/2026.01.13.698512v1
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Harald Ringbauer
6 months ago
(1/2) The preprint of our perspective on genetic estimates of relatedness in animal populations is out! Big Congratulations to Annika!
doi.org/10.32942/X28...
A systematic review of 2,861 articles shows that, even in 2025, 75% of such studies use microsatellites. And most use only a few!
#PopGen
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Emiliano Martí 🇦🇷
6 months ago
Meiotic drive has long been considered as a genetic curiosity. Genomic "footprints" suggest otherwise. Check out our new review
doi.org/10.1093/molb...
, a cross-taxa synthesis arguing that recurrent drive is a pervasive and underappreciated force in genome evolution.
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The Evolutionary Genomics of Meiotic Drive
Abstract. Meiotic drivers are selfish genetic elements that gain transmission advantages by distorting equal, Mendelian segregation. For decades, biologist
https://doi.org/10.1093/molbev/msag020
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Claire Mérot
Andy Foote
11 months ago
'Ancient stickleback genomes reveal the early stages of parallel adaptation' - now published online in Evolution
@journal-evo.bsky.social
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We hope this little guide and review of the recent literature on SVs will be useful for the community in
#ecology
#evolution
#genomics
#PopGen
. Great lead by Kat!!
add a skeleton here at some point
6 months ago
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reposted by
Claire Mérot
ERGA - European Reference Genome Atlas
6 months ago
#ERGAReads
| On the path to reference genomes for all biodiversity: laboratory protocols & lessons learned from processing over 2,000 species in the Sanger Tree of Life 🔗
academic.oup.com/gigascience/...
@sangerinstitute.bsky.social
@ebpgenome.bsky.social
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On the path to reference genomes for all biodiversity: laboratory protocols and lessons learned from processing over 2,000 species in the Sanger Tree of Life
Abstract. Since its inception in 2019, the Tree of Life programme at the Wellcome Sanger Institute has released high-quality, chromosomally resolved refere
https://academic.oup.com/gigascience/article/doi/10.1093/gigascience/giaf119/8300236
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