MultiQC
@multiqc.info
π€ 428
π₯ 10
π 26
Open-source tool to simplify and streamline quality control analysis, from
@seqera.io
reposted by
MultiQC
Maxime U Garcia
7 days ago
On a server bright on Christmas night, MultiQC sang, βAll stats unite!β From FastQC, pipelines adored, One tidy reportβwhat could you want more?
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MultiQC v1.33 is out! π 4 new modules, 60% faster parquet merging, and lots of improvements across the board. Here's what's new π§΅
17 days ago
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reposted by
MultiQC
Seqera
18 days ago
Stay in the loop with everything
@nextflow.io
,
@seqera.io
,
@multiqc.info
, and more!βοΈ Subscribe to our newsletter to get monthly updates on new product features, industry and community insights, events, and training workshops. π Subscribe now:
hubs.la/Q03Xf2NB0
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reposted by
MultiQC
Seqera
22 days ago
Importance of being open!π One of the greatest strengths of
@multiqc.info
is open source development.π§΅What started as a one-person project in 2015 has grown into a collaborative effort involving 235 contributors today.π§΅ π Read the blog post:
hubs.la/Q03WRgb20
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#NextflowSummit
now available on-demand! Be sure to check out the "MultiQC turns 10" talk by
@ewels.bsky.social
π
add a skeleton here at some point
about 1 month ago
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π‘A simple idea emerged from the frustration of manually parsing countless bioinformatics tool outputs.π That idea became MultiQC, and today we're celebrating 10 years of transforming global bioinformaticsπ πRead the highlights blog by
@seqera.io
:
hubs.la/Q03TXC_N0
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about 1 month ago
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reposted by
MultiQC
Seqera
2 months ago
π Celebrating 10 years of
@multiqc.info
! π The numbers speak volumes: πΉ Support for ~170 bioinformatics tools πΉ 1 run every 3 seconds (25k+ daily runs) πΉ From single contributor to 235 contributors πΉ 7000+ journal citations (~8-9 per day) π Discover a timeline of innovation:
hubs.ly/Q03PsbTP0
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reposted by
MultiQC
Seqera
5 months ago
πCelebrating 10 Years of
@multiqc.info
What began as a simple QC reporting tool has evolved into an essential resource used by thousands worldwide, becoming integral to the
#bioinformatics
ecosystm. π Discover MultiQC:
hubs.la/Q03Bh0wM0
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π Today marks 10 years since the very first
@multiqc.info
commit! What started as a simple tool for QC reports has grown into something used by thousands of labs worldwide. It's become a foundational tool in the fabric of
#bioinformatics
and it's a joy to see it play a small part in global research
5 months ago
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reposted by
MultiQC
Ming Tommy Tang
6 months ago
9/ Tools you need: FastQC: first defense MultiQC: overview across samples IGV: visualize coverage & peaks PCA plots: always Links:
www.bioinformatics.babraham.ac.uk/projects/fa...
multiqc.info/
software.broadinstitute.org/software/igv/
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Seqera
Seqera | The Home for Open Science | From the creators of Nextflow, Wave, and MultiQC
https://multiqc.info/
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Did you see,
#MultiQC
v1.28 went out a few days ago! There are a handful of release highlights for this version, but perhaps the most exciting is that .gif, .webp and .tiff files are now supported for
#CustomContent
- you can finally put your favourite gifs into reports! Just name them *_mqc.gif
9 months ago
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reposted by
MultiQC
Ming Tommy Tang
11 months ago
π QC reads with FastQC:
www.bioinformatics.babraham.ac.uk/projects/fa...
RNAseqqc
github.com/getzlab/rna...
π Check out multiQC for aggregated reports:
multiqc.info/
multiqc.info/
π¬ Learn to visualize data with IGV:
software.broadinstitute.org/software/igv/
Start every analysis with rigorous QC! π
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Seqera
Seqera | The Home for Open Science | From the creators of Nextflow, Wave, and MultiQC
https://multiqc.info/
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reposted by
MultiQC
Miss Salmonella
11 months ago
One of my top tools for primary data quality analysis, so essential for downstream analyses:
#MultiQC
. This recent update is incredibly useful!
seqera.io/multiqc/
github.com/MultiQC/Mult...
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MultiQC | Seqera
Aggregate results from bioinformatics analyses across many samples into a single report
https://seqera.io/multiqc/
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reposted by
MultiQC
Maxime U Garcia
11 months ago
Roses are red, Violets are blue,
@multiqc.info
knows it's Valentine too
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reposted by
MultiQC
Seqera
11 months ago
Read the blog post:
hubs.la/Q033Kjp30
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AI Summaries now available in MultiQC | Seqera
AI Summaries allow MultiQC users to quickly generate summaries of their reports, offering insights without needing to comb through every detail manually.
https://hubs.la/Q033Kjp30
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reposted by
MultiQC
Seqera
11 months ago
The gold standard in
#bioinformatics
reporting just got even better!
#AI
Summaries are now available in
@multiqc.info
π Find out more:
hubs.la/Q033Kjp30
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reposted by
MultiQC
Stephen Turner
11 months ago
One of the cooler things I saw at the Nextflow summit a few months ago. Can't wait to try this.
add a skeleton here at some point
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MultiQC v1.27 was released yesterday. It includes one major new feature: === β¨ AI summaries β¨ === LLMs are a natural next step for helping scientists understand large datasets.
@multiqc.info
now has built-in integration with
@seqera.io
AI as well as
#OpenAI
and
#AnthropicAI
π€
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11 months ago
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reposted by
MultiQC
Greg Fedewa
about 1 year ago
I'm excited to see my contributions made it into this version! It was a lot easier to add new modules than I expected. If anyone is wishing a tool was supported, you should just try adding it.
add a skeleton here at some point
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reposted by
MultiQC
Lukas Forer
about 1 year ago
Super cool! MultiQC now supports Haplocheck! π
@sebschoenherr.bsky.social
@whansi.bsky.social
add a skeleton here at some point
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reposted by
MultiQC
about 1 year ago
Nice tiny Xmas gift in the new release π. Percolator feature weights can be simply plotted now with multiQC!
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Sneaking a little holiday gift in at the last moment:
@multiqc.info
v1.26 just released! - π 10 new tools supported - π« 12 modules updated - π οΈ Bug fixes, improvements and refactoring! If you're quick, you might see a little christmassy easter egg!
github.com/MultiQC/Mult...
about 1 year ago
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reposted by
MultiQC
Phil Ewels
about 1 year ago
I'm looking for a nice pull-quote about
@multiqc.info
that we can use in some
@seqera.io
materials, if anyone fancies dropping something nice into the comments as an early Christmas present for me, that would be much appreciated! ππ» π
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reposted by
MultiQC
Galaxy Project
about 1 year ago
π Master the art of Quality Control for NGS data with
@galaxytraining.bsky.social
! Learn how to assess, improve, and summarize sequencing quality using tools like FASTQC, Cutadapt, and MultiQC. Catch errors early and save time on downstream analysis!
training.galaxyproject.org/training-mat...
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Sequence analysis / Quality Control / Hands-on: Quality Control
Analyses of sequences
https://training.galaxyproject.org/training-material/topics/sequence-analysis/tutorials/quality-control/tutorial.html
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reposted by
MultiQC
Phil Ewels
about 2 years ago
A highlight of this release is improved config parsing, with better support for environment variables π« Every MultiQC config option can now be set via an env var, and YAML configs can interpolate env vars into their strings:
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Just out:
@multiqc.info
v1.25.2 π This patch release fixes a whole host of bugs, the most important one being for
#bcl2fastq
π There are also a host of small additions sneaking in for
#ngsbits
,
#picard
,
#Nanostat
,
#Samtools
and more - so well worth the update!
github.com/MultiQC/Mult...
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Release v1.25.2 Β· MultiQC/MultiQC
MultiQC v1.25.2 - 2024-11-20 Multiple bug fixes and minor updates. Updates Add natural sort for sample sorting (#2959) Custom content: for plot_type: image, support custom_data config with section...
https://github.com/MultiQC/MultiQC/releases/tag/v1.25.2
about 1 year ago
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reposted by
MultiQC
Stephen Turner
about 1 year ago
Hey! I recently started blogging again at
blog.stephenturner.us
I used to write at
gettinggeneticsdone.blogspot.com
. Check out
@ewels.bsky.social
's talk on
@multiqc.info
at this year's
@nextflow.io
summit. I wrote about it here:
blog.stephenturner.us/p/nextflow-s...
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Paired Ends | Substack
Bioinformatics, computational biology, and data science updates from the field. Occasional posts on programming. Click to read Paired Ends, a Substack publication with thousands of subscribers.
https://blog.stephenturner.us/
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Hello world! Setting up a new account here to post updates about new releases and other things. If you're new to
@multiqc.info
then check out
seqera.io/multiqc/
to see what it's all about and have a go at running MultiQC in your browser!
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MultiQC | Seqera
Aggregate results from bioinformatics analyses across many samples into a single report
https://seqera.io/multiqc/
about 1 year ago
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