Pablo Meyer
@oldbap.bsky.social
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📥 370
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IBM research, DREAM challenges director, rabdomante, Sys Bio,👃🏽alma-mater UNAM
pinned post!
So here are the results of 2 years of hard work: BMFM-DNA: A SNP-aware DNA foundation model to capture variant effects It's a simple concept: encode DNA variants in your pre-training and get better fine-tunning results. Paper:
www.arxiv.org/abs/2507.05265
Code:
github.com/BiomedSciAI/...
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BMFM-DNA: A SNP-aware DNA foundation model to capture variant effects
Large language models (LLMs) trained on text demonstrated remarkable results on natural language processing (NLP) tasks. These models have been adapted to decipher the language of DNA, where sequences...
https://www.arxiv.org/abs/2507.05265
7 months ago
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This was so much fun!
add a skeleton here at some point
20 days ago
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#SUTOM
#1483 1/6 🟥🟥🟥🟥🟥🟥🟥
sutom.nocle.fr
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SUTOM
https://sutom.nocle.fr
23 days ago
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reposted by
Pablo Meyer
ISCB News
about 1 month ago
🚨
#ISMB2026
Proceedings submissions are due tomorrow, January 20 by 23:59 Anywhere on Earth (no exceptions). 📥 Submit here:
https://www.iscb.org/ismb2026/call-for-submissions/proceedings
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And the latest from
@dreamchallenges.bsky.social
add a skeleton here at some point
2 months ago
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New preprint with
@bckwon.bsky.social
use LLMs to summarize and visualize evidence for new gene-disease associations.
add a skeleton here at some point
2 months ago
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reposted by
Pablo Meyer
Alán Aspuru-Guzik
4 months ago
VAEs for molecular generation m: a novel take:
arxiv.org/pdf/2511.02769
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https://arxiv.org/pdf/2511.02769
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Pablo Meyer
Los Libros de la Catarata
5 months ago
Una nación que comparte un pasado europeo, un espacio norteamericano y un alma en la naturaleza que la rodea: 'Breve historia de Canadá', de Jean Meyer.
#Novedad
#PróximamenteEnTuLibrería
Nueva
#ColecciónBrevesHistoriasDePaísesDeAmérica
buff.ly/cqo2Ozh
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The rrrrrrrrobots are herrrrrrrreee
6 months ago
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Have the same question for my 2006 Prius
add a skeleton here at some point
6 months ago
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reposted by
Pablo Meyer
James Zou
6 months ago
🧠Can AI agents predict
#Alzheimers
? Participate in our DREAM challenge agentic track to find out! We provide unique training + test data for AI agents: snRNA-seq, IHC, stage, etc
synapse.org/Synapse:syn6...
Also co-submit your agent paper to
agents4science.stanford.edu
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‘It is because agents never know completely what they are doing that what they do has more sense than they know.’ Pierre Bourdieu
7 months ago
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So here are the results of 2 years of hard work: BMFM-DNA: A SNP-aware DNA foundation model to capture variant effects It's a simple concept: encode DNA variants in your pre-training and get better fine-tunning results. Paper:
www.arxiv.org/abs/2507.05265
Code:
github.com/BiomedSciAI/...
loading . . .
BMFM-DNA: A SNP-aware DNA foundation model to capture variant effects
Large language models (LLMs) trained on text demonstrated remarkable results on natural language processing (NLP) tasks. These models have been adapted to decipher the language of DNA, where sequences...
https://www.arxiv.org/abs/2507.05265
7 months ago
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ISMB/ECCB 2025: Join us for the DREAM Challenges session on Monday, 21 July, 14:00 Explore community-driven benchmarking for Foundation Models—run a live experiment for LLMs.
@bowang87.bsky.social
@anshulkundaje.bsky.social
@cziscience.bsky.social
@mariabrbic.bsky.social
@juliosaezrod.bsky.social
7 months ago
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Our paper on SNP-aware DNA foundation model is out!
add a skeleton here at some point
8 months ago
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reposted by
Pablo Meyer
arXiv q-bio.GN Genomics
8 months ago
Dandala, Danziger, Barkan, Biswas, Gurev, Hu, Madgwick, Koseki, Kozlovski, Rosen-Zvi, Shimoni, Tsou: BMFM-RNA: An Open Framework for Building and Evaluating Transcriptomic Foundation Models
https://arxiv.org/abs/2506.14861
https://arxiv.org/pdf/2506.14861
https://arxiv.org/html/2506.14861
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Le hubieran dado el avion del bienestar!
9 months ago
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See you in Liverpool!
add a skeleton here at some point
9 months ago
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reposted by
Pablo Meyer
Joel Mainland
10 months ago
With a contemporary smartphone, capturing, transmitting, and replicating sounds and visuals is a breeze, yet replicating scents remains elusive. If you want to change this, consider joining the 2025 DREAM Olfaction Challenge at
www.synapse.org/Synapse:syn6...
.
@oldbap.bsky.social
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DREAM Olfactory Mixtures Prediction Challenge 2025
'DREAM Olfactory Mixtures Prediction Challenge 2025' (Synapse ID: syn64743570) is a project on Synapse. Synapse is a platform for supporting scientific collaborations centered around shared biomed...
https://www.synapse.org/Synapse:syn64743570
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reposted by
Pablo Meyer
Alán Aspuru-Guzik
10 months ago
A very important from our group
#compchemsky
#aiforscience
#quantumchemistry
El Agente calculates complex quantum chemistry calculations from natural language! Please re-share with your network.
@thematterlab.bsky.social
@uoft.bsky.social
#nvidia
add a skeleton here at some point
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reposted by
Pablo Meyer
Paul Francois
10 months ago
As promised, a 'skeet' -orial on our paper published last week !
add a skeleton here at some point
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I.B.M. Insha’llah, ‘Bukra,’ & ‘Ma’lesh, a typical Egyptian expression which roughly translate, respectively, as “God willing,” “tomorrow” and “no matter”. The ancient and poetic version of procrastinating.
10 months ago
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reposted by
Pablo Meyer
11 months ago
Sign up for our latest challenge:
www.synapse.org/Synapse:syn6...
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All the truth lies in unsent emails!
11 months ago
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新年快乐！
about 1 year ago
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reposted by
Pablo Meyer
Hervé Le Tellier
about 1 year ago
L'OUvroir de LIttérature POtentielle a la tristesse de vous annoncer que l’oulipien Jacques Roubaud est désormais excusé à ses réunions pour cause de décès
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about 1 year ago
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And this
@dreamchallenges.bsky.social
came out in
@naturebiotech.bsky.social
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A community effort to optimize sequence-based deep learning models of gene regulation - Nature Biotechnology
A benchmarking competition improves tools that predict how regulatory regions control gene expression.
http://go.nature.com/3NnblYZ
about 1 year ago
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www.iuscientists.org/claudia-shei...
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Claudia Sheinbaum: activist, scientist, politician, and the first woman president of Mexico
by Pablo Meyer Rojas On the 2nd June 2024, Claudia Sheinbaum Pardo was elected president of Mexico. Her election represents three firsts for the Mexican presidency: the first woman, the first person ...
https://www.iuscientists.org/claudia-sheinbaum-activist-scientist-politician-and-the-first-woman-president-of-mexico/
over 1 year ago
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over 2 years ago
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Russian troops on Mexican Independence Day…
over 2 years ago
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Come to #RSGDREAM in LA
www.iscb.org/rsgdream2023...
over 2 years ago
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reposted by
Pablo Meyer
The New York Times
over 2 years ago
Mexico decriminalized abortion nationwide, in a decision that shows how Latin American countries are expanding reproductive rights.
nyti.ms/3PsdsMW
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