Sauna, vodka, tea. Inhale the North, speciate. Even ants must pee. Stankowski (2024) Evol J Linnean Soc doi.org/10.1093/evol...

APAV: An advanced pangenome analysis and visualization toolkit journals.plos.org/ploscompbiol...

🧬 New study in Gen. Bio.! We tested how RNA input & PCR cycles affect duplication rates across 4 sequencers. ↘️ RNA = ↗️ duplicates = ↘️ diversity. Key for optimizing RNA-seq protocols! Thanks + congrats to @catharineaquino.bsky.social @nataliazajac.bsky.social + collaborators! 🔗 tinyurl.com/bdcuen59

Interesting idea: instead of building the pangenome graph from scratch for new samples, dynamically update it by introducing new nodes/edges from long reads biorxiv.org/content/10.1101/2025.02.07.637057 PALSS-Pangenome Graph Augmentation from Long-reads Specific Strings github.com/ldenti/palss

Last week I had an incredible time at #MemPanG25! I was honoured to have a chance to give a talk! It was great to learn what is new and what is coming in the field of pangenomics. Huge thanks to @thinks.lol , @andreaguarracino.bsky.social, and the whole organizing team for making it happen!

Great to see our research on heterogenous and novel transcript expression in single cells of patient-derived clear cell renal cell carcinoma organoids published as part of Long-read sequencing special issue in Genome Research, along fantastic collection of articles on long reads!

We offer 2 PhD Positions in Evolutionary Biology! 1️⃣ Evolutionary Developmental Biology – Craniofacial evolution. (March 31, 2025) 2️⃣ Evolution of Polygenic Traits – Genetic adaptation in Drosophila. (April 30, 2025) More here: www.evolbio.mpg.de/1639156/Job_... #PhD #EvoDevo #Genetics