Joshua B. Plotkin
@jplotkin.bsky.social
📤 2210
📥 793
📝 88
Annenberg Professor of Natural Sciences, University of Pennsylvania
http://evolution.sas.upenn.edu/
Can’t even
about 9 hours ago
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Miharashi, Niseko
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8 days ago
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Breakfast with Yotei-san
11 days ago
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Michishirube 道しるべ
#Kabuchiko
13 days ago
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Here are some nice streetcars.
#TodenLine
#Tokyo
14 days ago
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Here are some nice trains.
#Nippori
#Tokyo
14 days ago
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reposted by
Joshua B. Plotkin
NSF-Simons NITMB
14 days ago
Evolutionary game theory researches: Join us for the ‘Evolutionary Games: Mathematical Theory and Biological Insights’ workshop at NITMB! Travel applications are due Wednesday, March 11th -
www.nitmb.org/evolutionary...
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Photographic vibes, Colombia
about 1 month ago
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Joshua B. Plotkin
Piret Avila
about 1 month ago
📢 I'm hiring! 3-year postdoc in theoretical evolutionary ecology at University of Helsinki 🇫🇮 Apply:
jobs.helsinki.fi/job/Helsinki-Postdoctoral-Researcher-in-Theoretical-Evolutionary-Biology/1348955157/
#AcademicJobs
#Postdoc
#EvolutionaryEcology
#TheoreticalEcology
#ScienceJobs
#AcademicChatter
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Postdoctoral Researcher in Theoretical Evolutionary Biology
Postdoctoral Researcher in Theoretical Evolutionary Biology
https://jobs.helsinki.fi/job/Helsinki-Postdoctoral-Researcher-in-Theoretical-Evolutionary-Biology/1348955157/
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Cartagena
about 1 month ago
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Coffee region, Colombia
about 1 month ago
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Bazurto market, Cartagena
about 1 month ago
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Joshua B. Plotkin
Nandita Garud
about 1 month ago
If you are interested in this work and are looking for a postdoc position, please get in touch -- we are actively looking for someone to join our group at UCLA!
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Very cool work. Intracellular interactions shape antiviral resistance outcomes in poliovirus via eco-evolutionary feedback
www.nature.com/articles/s41...
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Intracellular interactions shape antiviral resistance outcomes in poliovirus via eco-evolutionary feedback - Nature Ecology & Evolution
A model of intrahost poliovirus replication shows that, after several rounds of replication, pocapavir, a poliovirus capsid inhibitor, collapses viral density, preventing intracellular interactions th...
https://www.nature.com/articles/s41559-025-02926-x
about 2 months ago
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Strong endorse.
add a skeleton here at some point
about 2 months ago
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reposted by
Joshua B. Plotkin
Maciej F Boni
about 2 months ago
add a skeleton here at some point
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Joshua B. Plotkin
Ben Allen
about 2 months ago
Hi everyone! I'm co-organizing this retreat/workshop June 15-19 for those looking to get started in mathematical/computational modeling of biological processes. Location is a beautiful farm in NC. Please share with students and others who want to build modeling skills. Interdisciplinarity welcome!
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#gobirds
2 months ago
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Joshua B. Plotkin
Anastasia Bizyaeva
2 months ago
As a former physics undergraduate, giving a colloquium in a physics department feels like a very full-circle moment ☺️
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Steve Bannon casually texting with Jeffrey Epstein about meetups in Paris, oh and about Jared, Ivanka and so much more.
3 months ago
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Grep game very strong tonight.
3 months ago
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3 months ago
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reposted by
Joshua B. Plotkin
Reto Fiolka
3 months ago
I did not expect that: Large Language Models are invertible:
arxiv.org/abs/2510.15511
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Language Models are Injective and Hence Invertible
Transformer components such as non-linear activations and normalization are inherently non-injective, suggesting that different inputs could map to the same output and prevent exact recovery of the in...
https://arxiv.org/abs/2510.15511
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Philly Halloween
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3 months ago
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Joshua B. Plotkin
Santa Fe Institute
3 months ago
What if one model could realistically predict the economy of an entire country? The entire world? A month-long working group, co-organized by SFI External Professor
@doynefarmer.bsky.social
, made the case that agent-based models may bring this vision to life:
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Agent-based models move into the economic mainstream
In the 1980s and ’90s, SFI played laboratory to a promising new method known as agent-based modeling. In ensuing decades, agent-based models (ABMs) proliferated across many fields, including economics...
https://www.santafe.edu/news-center/news/agent-based-models-move-into-the-economic-mainstream
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reposted by
Joshua B. Plotkin
Kaleda Denton
3 months ago
Honoured to have done my first ever podcast on The Armen Show! Besides science, math, & academia, we talked about: -LLMs hyping up bad ideas -My 5 foster cats, but whether I'm secretly a dog person -How it would be nice to "skip" & "mute" people in real life 😛 Check it out! 😄
tinyurl.com/yc4hjz2x
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456: Kaleda Denton | Following the Majority - How Conformity Shapes Culture and AI
In this episode of the Armen Show, Armen Shirvanian interviews Dr. Kaleda Denton, a post-doctoral fellow at the Santa Fe Institute. They discuss the interdisciplinary nature of the Institute, the concept of niche construction in biology, and the dynamics of decision-making, particularly the differences between following the mean versus the majority. The conversation also explores the limitations of game theory, the role of cultural evolution in cooperation, and the impact of AI on accessibility and learning. They delve into the importance of reducing polarization while maintaining diversity in viewpoints, emphasizing the need for mixing and collaboration across different fields and perspectives. In this engaging conversation, Dr. Kaleda Denton and Armen Shirvanian explore a variety of topics including the distinction between majority and mean opinions, the challenges of reading in the digital age, and the implications of large language models (LLMs) on culture. They discuss the importance of communication in society, the influence of close circles versus wider communities in learning, and the role of influential figures in personal development. The conversation also delves into the concept of memes and cultural transmission, the impact of role models on cumulative culture, and the question of human uniqueness in the context of cultural evolution. Check out Kaleda's website at https://www.kaledadenton.com/ 00:00 Introduction to the Podcast and Guest 03:01 The Santa Fe Institute: A Unique Interdisciplinary Environment 05:56 Niche Construction and Extended Evolutionary Synthesis 08:56 Mean vs. Majority: Insights from Research 12:08 Game Theory and Its Limitations 15:03 Cultural Evolution and Cooperation 17:59 The Role of AI in Learning and Accessibility 20:54 Conformity Across Species and LLMs 23:59 The Importance of Current Information 27:03 Final Thoughts on AI and Human Interaction 36:57 The Quirks of AI Hallucinations 38:53 The Evolution of Language Models 39:35 Agency and Individuality in AI Interactions 41:41 The Flattening of Ideas and Language 43:42 Cognitive Offloading and Its Consequences 45:04 Reducing Polarization Through Interaction 48:39 The Importance of Mixing Perspectives 50:02 The Dangers of Majority Influence 53:51 Understanding Mean vs. Majority Opinions 01:04:32 Risks and Opportunities in Cultural Evolution 01:10:02 The Impact of Headlines on News Consumption 01:11:46 The Need for Positive News 01:15:04 Learning from Close Circles vs. Wider Communities 01:17:23 Influential Figures in Personal Development 01:18:44 The Evolution of Human Uniqueness 01:22:38 Understanding Memes and Cultural Transmission 01:23:10 The Multiplicative Costs of Altruism 01:36:09 The Role of Role Models in Cumulative Culture
https://tinyurl.com/yc4hjz2x
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Joshua B. Plotkin
bioRxiv Evolutionary Biology
4 months ago
Natural evolution of intermale sexual behavior by multiple pheromone switches among Drosophila species
https://www.biorxiv.org/content/10.1101/2025.10.14.682417v1
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Joshua B. Plotkin
Georgii "Yegor" Bazykin
4 months ago
Now hiring a computational postdoc (evolutionary genomics, molecular evolution) in my lab at Emory University. If you’re interested in population genetics, fitness landscapes, and viral evolution — get in touch.
faculty-emory.icims.com/jobs/151181/...
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Careers | Emory University | Atlanta GA
https://faculty-emory.icims.com/jobs/151181/post-doctoral-fellow/job
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Morning dirty
#bearpondespresso
5 months ago
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Longshan Temple
#infrared
5 months ago
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Fiat 600
5 months ago
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Firenze
5 months ago
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#brigantine
5 months ago
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Trastevere, Rome
5 months ago
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reposted by
Joshua B. Plotkin
#michelangelo
#academia
5 months ago
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#michelangelo
#academia
5 months ago
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#bernini
#borghese
6 months ago
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Some nice trains.
6 months ago
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reposted by
Joshua B. Plotkin
Daniel Cooney
7 months ago
I am really happy to share that there will be a
@nitmb.bsky.social
workshop next year on mathematical and biological features of evolutionary game theory. It was really fun to co-organize this workshop with Olivia Chu, Alex McAvoy, and
@jplotkin.bsky.social
.
www.nitmb.org/evolutionary...
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Evolutionary Games: Mathematical Theory and Biological Insights
https://www.nitmb.org/evolutionary-games-workshop
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Yamato-sugi, a 4000 year old Yakusugi
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7 months ago
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Here’s a nice mushroom.
#yakushima
7 months ago
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Trainspotting trifecta (Sobu, Chuo, Marunouchi)
7 months ago
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Hijiribashi
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7 months ago
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PNAS special feature on Collective Artificial Intelligence and Evolutionary Dynamics Contributions from scientists in machine learning, evolutionary game theory, and their growing intersection.
www.pnas.org/toc/pnas/122...
7 months ago
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Joshua B. Plotkin
MachinePix
7 months ago
East Japan Railway Company mini training vehicle.
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Congrats
@alisonfeder.bsky.social
!
7 months ago
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Graphic artist sends us an example cover illustration … Barabasi vibes and mild nausea.
10 months ago
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TIL “Inside of us, we know that love and self-knowledge are the only true paths to good health”
11 months ago
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Time to file your own lawsuit,
@upenn.edu
,
@pennstateuniv.bsky.social
, …
add a skeleton here at some point
12 months ago
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Go Elgses!
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12 months ago
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