Fixed human pangenome sequences reveal origins of common human traits https://www.biorxiv.org/content/10.64898/2026.04.30.722098v1

Ecological diversification without genomic reorganization: repeat dynamics and regulatory evolution in Metarhizium robertsii https://www.biorxiv.org/content/10.64898/2026.04.30.721964v1

Modeling Site-Specific Mutation Patterns in Pandemic-Scale Phylogenetics https://www.biorxiv.org/content/10.64898/2026.04.30.721865v1

Diversity and divergence of two sympatric, sibling octopus species https://www.biorxiv.org/content/10.64898/2026.04.30.721928v1

South Asian Maternal Lineage haplogroup R30 Provides Phylogenetic Evidence of human dispersal across South Asia https://www.biorxiv.org/content/10.64898/2026.04.29.721543v1

Evolutionary and epidemiological considerations for anthelmintic treatments in ruminant livestock https://www.biorxiv.org/content/10.64898/2026.04.29.721584v1

Flower color locus resists introgression due to correlational selection with other floral traits in Ipomoea cordatotriloba https://www.biorxiv.org/content/10.64898/2026.04.29.721739v1

Insights from sourdough redefine the domestication landscape of baker's yeast https://www.biorxiv.org/content/10.64898/2026.04.29.721752v1

Ovipositor morphology and mechanosensory divergence drive niche breadth expansion in Drosophila https://www.biorxiv.org/content/10.64898/2026.04.29.721748v1

Secondary structure distances reveal a new dimension of protein evolution https://www.biorxiv.org/content/10.64898/2026.04.29.721599v1

Disassortative mating in replicated secondary contact experiments in nature https://www.biorxiv.org/content/10.64898/2026.04.28.721371v1

Social microbiome transmission predicts microbial specialization and host lifespan in a wild primate https://www.biorxiv.org/content/10.64898/2026.04.29.721577v1

Eco-evolutionary dynamics and environmental detoxification jointly shape bacterial community response to antibiotic perturbation https://www.biorxiv.org/content/10.64898/2026.04.27.721019v1

Do sex differences in autosomal recombination rates facilitate divergence? https://www.biorxiv.org/content/10.64898/2026.04.27.721057v1

Domestication and deep lineage divergence define two discrete trajectories in Kluyveromyces marxianus https://www.biorxiv.org/content/10.64898/2026.04.28.721375v1

Plastome convergence across heterotrophic plant lineages: genome reduction, extreme AT bias, high substitution rates, and functional persistence in the endoparasitic Mitrastemonaceae https://www.biorxiv.org/content/10.64898/2026.04.27.721060v1

Convergent evolution of parrotfish beaks enables stress redistribution during high-force feeding https://www.biorxiv.org/content/10.64898/2026.04.27.721161v1

Sustained darkness reveals rapid phenotypic accommodation and loss of plasticity in cavefish evolution https://www.biorxiv.org/content/10.64898/2026.04.28.721295v1

Comparative Genomics of Two Chaetoceros muelleri Strains Reveals Structural and Functional Variation https://www.biorxiv.org/content/10.64898/2026.04.27.720831v1

Selection favors context-dependent bias in altruism https://www.biorxiv.org/content/10.64898/2026.04.26.720906v1

Atlantic and Indo-Pacific separation in Palythoa sibling species: phylogenomic analyses using ultraconserved elements https://www.biorxiv.org/content/10.64898/2026.04.26.720863v1

Insecticide resistance evolution and assisted gene flow interact to shape the evolution of plasticity https://www.biorxiv.org/content/10.64898/2026.04.26.720922v1

Evolutionary turnover of protein structural disorder drives aberrant proteome remodelling in naked mole rat https://www.biorxiv.org/content/10.64898/2026.04.27.720964v1

Constitutive and inducible fibrosis explain immune variation among threespine stickleback populations https://www.biorxiv.org/content/10.64898/2026.04.27.721125v1

Regulatory innovation and transcriptome turnover drive the evolution of multicellularity in brown algae https://www.biorxiv.org/content/10.64898/2026.04.27.720984v1

Getting a head: Evidence for a conserved anterior head patterning gene network in arthropods https://www.biorxiv.org/content/10.64898/2026.04.25.720801v1

Balancing mechanics and metabolism: elevational variation in the microanatomy of hummingbird flight muscle https://www.biorxiv.org/content/10.64898/2026.04.25.720810v1

The genome of the Pacific acorn barnacle provides insights into the evolution of extremely large populations https://www.biorxiv.org/content/10.64898/2026.04.27.721231v1

Superspreaders increase deleterious mutant burden and can accelerate the evolution of complex traits in pathogens https://www.biorxiv.org/content/10.64898/2026.04.24.720758v1

GhostHunter: A Multi-Test Framework for Detecting Ghost Introgression https://www.biorxiv.org/content/10.64898/2026.04.24.720650v1

EMPIRE: The Ellipse Model for Phylogenetic Inference of Range Evolution https://www.biorxiv.org/content/10.64898/2026.04.23.720387v1

DTX3L-PARP9 co-evolve as a single adaptive unit linking ubiquitination and ADP-ribosylation in antiviral immunity https://www.biorxiv.org/content/10.64898/2026.04.23.720386v1

Fixation of a homozygote and dynamical characterization of the Price equation https://www.biorxiv.org/content/10.64898/2026.04.22.720281v1

Cultural transmission and genomic co-divergence in the willow tit across the Palearctic https://www.biorxiv.org/content/10.64898/2026.04.23.720297v1

clootl: an R package for accessing and manipulating a complete, versioned avian phylogeny https://www.biorxiv.org/content/10.64898/2026.04.23.720449v1

Colony phase structure favors permanent worker evolution in juvenile social systems https://www.biorxiv.org/content/10.64898/2026.04.24.720620v1

Life history stage-dependent nuclear selection in chimeric fungi https://www.biorxiv.org/content/10.64898/2026.04.23.718558v1

Adaptive molecular convergence is pervasive across deep time and largely decoupled from phenotypic convergence https://www.biorxiv.org/content/10.64898/2026.04.23.718300v1

Phylogenetic signal in herbicide resistance evolvability, and the use of phylogenies to predict herbicide resistance risk https://www.biorxiv.org/content/10.64898/2026.04.23.720359v1

Genome quality variation across Scyphozoa and the comparative distribution of retinoid- and AhR-related gene families. https://www.biorxiv.org/content/10.64898/2026.04.22.720242v1

A single-stranded DNA virus replicates in the mitochondria of a marine oomycete https://www.biorxiv.org/content/10.64898/2026.04.22.720165v1

Entrenchment of germline amino-acid differences in antibody affinity maturation https://www.biorxiv.org/content/10.64898/2026.04.21.720000v1

Toward a networked central dogma: protein specificity reshapes molecular encounters across evolution https://www.biorxiv.org/content/10.64898/2026.04.21.720012v1

Lineage-Independent Modular Evolution of Carbon-Source Utilization https://www.biorxiv.org/content/10.64898/2026.04.22.720058v1

Survival Benefits Outweigh Germline Competition Costs in Kin Chimeras https://www.biorxiv.org/content/10.64898/2026.04.22.720247v1

Environmental feedback maintains cooperation in viruses https://www.biorxiv.org/content/10.64898/2026.04.20.719708v1

Centromeric variation is shared across ploidy barriers in Alnus glutinosa agg. https://www.biorxiv.org/content/10.64898/2026.04.21.719804v1

Cartilage canals in sharks and rays show that blood vessels can exist in mature cartilage without triggering endochondral bone formation https://www.biorxiv.org/content/10.64898/2026.04.21.720020v1

A deep genetic structure phylogenomically frames the closest algal relatives of land plants https://www.biorxiv.org/content/10.64898/2026.04.20.719584v1

Disparity analyses are robust to ancestral state estimation uncertainty https://www.biorxiv.org/content/10.64898/2026.04.21.719166v1