CVR Bioinformatics
@cvrbioinfo.bsky.social
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๐ฅ 42
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We are a group of computer-based researchers at
@CVRinfo.bsky.social
We are at our future planning meeting with Genomics team at main campus of University ๐ฐ
@cvrbioinfo.bsky.social
3 days ago
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reposted by
CVR Bioinformatics
Joe Grove
10 days ago
๐จ New Web Resource Alert! ๐จ We're delighted to share Viro3D a database of >85000 viral protein structure predictions from >4400 human & animal viruses. ๐
viro3d.cvr.gla.ac.uk
๐
www.embopress.org/doi/full/10....
@molsystbiol.org
@cvrinfo.bsky.social
@uofgmvls.bsky.social
#Virology
#AlphaFold
๐งช ๐ฆ
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Viro3D
https://viro3d.cvr.gla.ac.uk
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reposted by
CVR Bioinformatics
Antonia Ho
about 2 months ago
๐ฃCome work with us! Looking for a Research Assistant/Associate in Data Analysis, for a Pfizer-funded research project focused on effectiveness of maternal
#RSV
vaccination in infants in Scotland. More:
bit.ly/3Va7yCd
Enq to:
@louisapollock.bsky.social
Closing: 17 Sept 25
@cvrinfo.bsky.social
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Today we are showcasing our Lego based DNA sequencer at
@cvrinfo.bsky.social
summer party. โ๏ธโฑ๏ธ
about 2 months ago
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Today we have been at the Glasgow Science Centre showcasing our new Lego based DNA sequencer: GO-Seq, to learn about respiratory viruses, their DNA and sequencing.
@cvrinfo.bsky.social
@glasgowscience.bsky.social
3 months ago
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reposted by
CVR Bioinformatics
Nature Communications
3 months ago
SFTSV is a deadly tick-borne virus. In this study, Petit et al. used a multi-omics approach to reveal antiviral responses in SFTSV-infected tick cells
@virotick.bsky.social
@brennanlab.bsky.social
@cvrinfo.bsky.social
@uniofsurrey.bsky.social
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Multi-omics analysis of SFTS virus infection in Rhipicephalus microplus cells reveals antiviral tick factors - Nature Communications
Severe Fever with Thrombocytopenia Syndrome Virus (SFTSV) is a deadly tick-borne virus and a growing global health threat. In this study, Petit et al. used a multi-omics approach on SFTSV-infected tick cells to study its impact and reveal host antiviral responses and key restriction factors.
https://bit.ly/4kCQlM9
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reposted by
CVR Bioinformatics
Ed Hutchinson
3 months ago
Are you doing a PhD or research Masters in Virology? Want to be part of a community of like-minded researchers from across the UK and Ireland? We're excited to announce the first annual conference run by and for postgraduate research students in Virology. Please sign up, and please spread the word!
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reposted by
CVR Bioinformatics
MRC-UofG Centre for Virus Research
3 months ago
๐ข EVENT | 27th Glasgow Virology Workshop Join us for a day of interesting talks & discussions. Speakers: Adam Bailey, Louis Lambrechts, Kirsty Roy, Judy Breuer, Sheila Graham, Juan Reguera & a selection of students. ๐ Fri 5th Sept 2025 ๐ Register:
gla.ac.uk/research/az/...
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reposted by
CVR Bioinformatics
MRC-UofG Centre for Virus Research
3 months ago
Last week we welcomed colleagues from โช@helmholtzhzi.bsky.socialโฌ Centre for Infection Research & other project partners for our CVR-HZI Collaborative Development Fund Symposium. We heard about exciting research projects and discussed new opportunities to further our collaborations.
cvr-hzi.co.uk
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Our viral
#Bioinformatics
course has come to an end ๐
@cvrinfo.bsky.social
This year we welcomed 15 amazing participants from Europe, Asia, Africa & Oceania๐ Huge thanks to everyone who joined โ and to our instructors!
4 months ago
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Had a delicious
#VGB2025
course dinner at Ka Pao ๐ฝ๏ธ๐ At another buffet-style social,
@quangu.bsky.social
welcomed everyone with a traditional Scottish folk song ๐ค
4 months ago
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As the collaborating centre of
@woahglobal.bsky.social
, weโre thrilled to launch our 8th annual course on viral bioinformatics & genomics! Welcome speech by
@cvrinfo.bsky.social
director
@emcat1.bsky.social
& head of Bioinformatics
@davidlrobertson.bsky.social
๐งฌ๐
#bioinformatics
#genomics
4 months ago
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reposted by
CVR Bioinformatics
Marine Petit
5 months ago
OMG! I can finally share my joy to see my SFTSV work published in
@natcomms.nature.com
! This adventure started by the award of my MSCA grant and my move to the Kohl and
@brennanlab.bsky.social
at
@cvrinfo.bsky.social
. Let's chat about how we discovered novel tick anti-viral effectors!
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Multi-omics analysis of SFTS virus infection in Rhipicephalus microplus cells reveals antiviral tick factors - Nature Communications
Severe Fever with Thrombocytopenia Syndrome Virus (SFTSV) is a deadly tick-borne virus and a growing global health threat. In this study, Petit et al. used a multi-omics approach on SFTSV-infected tic...
https://www.nature.com/articles/s41467-025-59565-w
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reposted by
CVR Bioinformatics
MRC-UofG Centre for Virus Research
5 months ago
Read the paper:
journals.plos.org/plospathogen...
Research led by Ewan Smith in the Illingworth Lab (
@chrisillingworth.bsky.social
). Collaborations:
@cambridgeup.bsky.social
Funding:
@ukri.org
@wellcometrust.bsky.social
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Variable rates of SARS-CoV-2 evolution in chronic infections
Author summary Novel SARS-CoV-2 variants such as Alpha and Omicron were characterised by the presence of multiple genetic changes not found in other SARS-CoV-2 viruses at the time. One hypothesis is t...
https://journals.plos.org/plospathogens/article?id=10.1371/journal.ppat.1013109
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reposted by
CVR Bioinformatics
MRC-UofG Centre for Virus Research
5 months ago
๐ NEW | Genetic Study shows that Wildlife Trade sparked COVID-19 Virus Emergence in Humans SARS-CoV-2 arrived in Wuhan too quickly for bat hosts to have carried it there.
cell.com/cell/fulltex...
gla.ac.uk/research/az/...
@davidlrobertson.bsky.social
@spyroslytras.bsky.social
@bljog.bsky.social
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The recency and geographical origins of the bat viruses ancestral to SARS-CoV and SARS-CoV-2
Recombination-aware evolutionary analyses of the entire genomes of SARS-CoV-1-like and SARS-CoV-2-like viruses indicate that SARS-CoV-1 and SARS-CoV-2 descend from bat coronaviruses that circulated as...
https://cell.com/cell/fulltext/S0092-8674(25)00353-8
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reposted by
CVR Bioinformatics
MRC-UofG Centre for Virus Research
5 months ago
๐ข You have until Friday 30th May to submit an abstract to present at this year's
#GlasgowVirologyWorkshop
! We'd love to hear from delegates of all backgrounds and career stages. Send a PDF with your abstract (200 words max), name, email and affiliation to
[email protected]
.
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reposted by
CVR Bioinformatics
MRC-UofG Centre for Virus Research
5 months ago
Members of the CVR's Bioinformatics Team (
@cvrbioinfo.bsky.social
) attended this year's International Virus Bioinformatics Meeting (ViBioM) in Lisbon. Postdocs Kieran Lamb and Fran Young and students Rubayet Alam and Robert Strange presented interesting posters.
evbc.uni-jena.de/events/vibio...
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The UK Pandemic Sciences Network meeting & One Health Computational Network meeting ๐@cvrinfo.bsky.social
@ukri.org
@uofglasgow.bsky.social
5 months ago
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reposted by
CVR Bioinformatics
MRC-UofG Centre for Virus Research
6 months ago
๐ DEADLINE EXTENDED | UK Pandemic Sciences Network & One Health Computational Network Register for the event before Tues 8th April. Don't miss out this incredible opportunity to take part in these important events. UKPSN:
ukpsn2025.eventbrite.co.uk
OHCN:
ohcn2025.eventbrite.co.uk
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UK Pandemic Sciences Network Conference 2025
The UKPSN meeting at University of Glasgow will explore pandemic preparedness, surveillance, innovation, response, and global collaboration.
https://UKPSN2025.eventbrite.co.uk
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reposted by
CVR Bioinformatics
MRC-UofG Centre for Virus Research
7 months ago
Congratulations Dan! ๐ Dan Liu's thesis focuses on leveraging pre-trained protein language models to predict virus-host associations and training large language models to predicted protein-protein interactions within and across species.
@cvrbioinfo.bsky.social
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reposted by
CVR Bioinformatics
MRC-UofG Centre for Virus Research
7 months ago
๐ We recently visited Nairobi & Kilifi for a partnership meeting hosted by the Kenya Medical Research Institute Centre for Virus Research & Wellcome Trust Research Programme. Together we aim to drive impactful research to tackle viral threats & improve global health.
gla.ac.uk/research/az/...
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reposted by
CVR Bioinformatics
MRC-UofG Centre for Virus Research
6 months ago
๐ข New paper in
@naturecomms.bsky.social
Check out Emma's thread below โฌ๏ธ
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reposted by
CVR Bioinformatics
MRC-UofG Centre for Virus Research
6 months ago
We hope everyone attending
@microbiologysociety.org
's conference this week has a brilliant time! ๐ฆ
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Dan from The Robertson Lab has just passed her viva!ย Congratulations ๐ฅ ๐
@cvrinfo.bsky.social
@davidlrobertson.bsky.social
7 months ago
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reposted by
CVR Bioinformatics
MRC-UofG Centre for Virus Research
7 months ago
๐ข Join us at the upcoming
@ukri.org
One Health Computational Network Symposium
#OHCN2025
, we'll be discussing surveillance, AI's potential, genome epidemiology & public health. Connect with experts and help advance pandemic preparedness. Register now:
bioinformatics.cvr.ac.uk/one-health-c...
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reposted by
CVR Bioinformatics
University of Glasgow School of Infection & Immunity
7 months ago
๐ฃ Happy International Women's Day! Today, we celebrate two of the women leading by example in
@uofgsii.bsky.social
. We are especially proud to highlight these inspirational figures as the first females to lead Sii and
@cvrinfo.bsky.social
. ๐
www.gla.ac.uk/schools/infe...
#IWD2025
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reposted by
CVR Bioinformatics
Antonia Ho
7 months ago
Finally made it to KEMRI Wellcome Trust Research Programme, 5 years after a planned visit was scuppered by the pandemic. Thanks to Charles Nyaigoti & James Abuje for being great hosts and showing us the fantastic science they are doing.
@cvrinfo.bsky.social
@davidlrobertson.bsky.social
๐ฐ๐ช๐ฆ ๐ฌ๐งฌ
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Join us for UKRI One Health Computational Network Symposium! ๐ 24th April ๐
@uofglasgow.bsky.social
Experts in AI & computational methods tackling viral threats! ๐ฆ ๐ Register:
tinyurl.com/cvrohcn
@cvrinfo.bsky.social
#AI
#ComputationalBiology
#InfectiousDiseases
8 months ago
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reposted by
CVR Bioinformatics
Viral Informatics, Biostatistics, and Evolution (VIBE) Lab
8 months ago
๐จ๐จ๐ฝโ๐ฌ๐ฉ๐ฟโ๐ฌ๐ฃ๐ผ๐๐๐ฑ๐ผ๐ฐ ๐ต๐ถ๐ฟ๐ถ๐ป๐ด ๐ฎ๐น๐ฒ๐ฟ๐! Work with us to develop supervised learning and graph analysis of the evolutionary and genomic links between viruses, the tissues they can infect, and the hosts that can be infected. 3y role based at
@cvrinfo.bsky.social
, apply by 18 Mar:
vibelab.co.uk/blog/25-02-1...
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3y postdoc role available in computational biology! | VIBE Research Lab
Work with us in a three year postdoc research role! The role will develop supervised learning and graph analysis methods to understand the evolutionary and genomic links between viruses, the tissues t...
https://vibelab.co.uk/blog/25-02-18-pdra_computational_biology/
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reposted by
CVR Bioinformatics
MRC-UofG Centre for Virus Research
8 months ago
๐ฆHow do bunyaviruses spread via mosquitoes? A new study shows the NSm protein is key. NSm helps the virus move cell-to-cell in the mosquito midgut, a crucial step for transmission. Without it, infection fails. Find out more:
gla.ac.uk/research/az/...
Read the paper:
nature.com/articles/s41...
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reposted by
CVR Bioinformatics
Spyros Lytras
8 months ago
Recently we have been doing lots of work on how modern
#AI
methods can be applied to studying virus evolution, so it felt like great timing to write a perspective about it! Very happy to see our paper as editor's pick in JVI!๐ฅณ๐ฅณ
doi.org/10.1128/jvi....
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Pathogen genomic surveillance and the AI revolution | Journal of Virology
Genomic pathogen sequencing during the COVID-19 pandemic highlighted the critical role of surveillance in understanding the persistence of SARS-CoV-2 in the human population despite high levels of pro...
https://doi.org/10.1128/jvi.01601-24
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reposted by
CVR Bioinformatics
MRC-UofG Centre for Virus Research
8 months ago
๐ข Fellowship Sponsorship at the CVR ๐ Deadline 2/4/25 We have an open sponsorship process and are committed to supporting a diverse, inclusive & well-supported community. We particularly welcome applicants from underrepresented backgrounds.
gla.ac.uk/research/az/...
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reposted by
CVR Bioinformatics
MRC-UofG Centre for Virus Research
8 months ago
๐ข After 14 years of successful leadership, Prof Massimo Palmarini has stepped down as CVR Director. Prof Emma Thomson, a leading expert in emerging infectious diseases, will act as Interim Director, continuing the CVRโs vital work in virus research. ๐
gla.ac.uk/news/headlin...
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reposted by
CVR Bioinformatics
Chris Illingworth
9 months ago
Could a commonly-prescribed drug, given under medical supervision, help to prevent SARS-CoV-2 transmission in hospitals?ย We used mathematical modelling to carry out a preliminary assessment.ย
medrxiv.org/cgi/content/...
.ย Thread follows.
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Modelling the potential use of pre-exposure prophylaxis to reduce nosocomial SARS-CoV-2 transmission
The nosocomial transmission of respiratory pathogens is an ongoing healthcare challenge, with consequences for the health of vulnerable individuals. Outbreaks in hospitals can require the closure of b...
https://medrxiv.org/cgi/content/short/2024.12.27.24319372v1
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reposted by
CVR Bioinformatics
MRC-UofG Centre for Virus Research
9 months ago
What will viruses do next?๐ฆ New article from
@naturecomms.bsky.social
explores how
#AI
is transforming viral evolution prediction. Research from
@davidlrobertson.bsky.social
uses AI to better understand these vast evolutionary trajectories & determine their limits.
www.nature.com/articles/d41...
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What will viruses do next? AI is helping scientists predict their evolution
Forecasts of viral variation could improve vaccine and antiviral treatments ahead of time.
https://www.nature.com/articles/d41586-024-04195-3#ref-CR7
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