Navya Shukla
@navya-shukla.bsky.social
π€ 33
π₯ 49
π 3
phd grad, functional genomics in evolution and cancer
Lift&Add is live π suprised that trying to the answer the simple problem - how do I get more marsupials in my alignments? - has let to a method paper, but happy nonetheless.
academic.oup.com/bioinformati...
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Lift&Addβrapid and robust addition of new species to alignments of conserved non-coding sequences
AbstractMotivation. Identifying sequence constraint across long evolutionary distances is a powerful method for the discovery of functional genomic sequenc
https://academic.oup.com/bioinformatics/article/42/6/btag315/8696433
18 days ago
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first cancer conference
#CBA2026
! not too bad at all
21 days ago
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reposted by
Navya Shukla
3 months ago
Researchers from the Human Genomics & Evolution Lab have helped uncover how DNA inherited from extinct human relatives continues to influence our biology today. Find out more:
www.svi.edu.au/news-events/...
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Navya Shukla
Patrick Gibbs
4 months ago
Happy to share new manuscript I completed with
@ee-reh-neh.bsky.social
&
@davisjmcc.bsky.social
back in Melbourne. The work originally conceived by
@ijbeasley.bsky.social
focuses on how we can reconcile and meta-analyse eQTL studies across studies cohorts and ancestries.
doi.org/10.64898/202...
add a skeleton here at some point
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Navya Shukla
Irene Gallego Romero
4 months ago
Hi yes I will have more to say about this in a few hours but please enjoy this paper. It's been a huge labour of love and effort for the last four years, and a significant part of our research efforts, and I'm so so so thrilled it's finally ready to share. Tldr: scRNA-seq in Indonesia hard but fun
add a skeleton here at some point
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My non-MPRA phd work! π
add a skeleton here at some point
8 months ago
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reposted by
Navya Shukla
Irene Gallego Romero
12 months ago
π§ͺπ₯οΈπ§¬ It's here!! Our second MPRA, which is totally different from the first. For starters, there's no human sequences anywhere! Instead there's marsupials, wolves, pandas and a lot of hard work from lab members past & present, chief amongst them
@navya-shukla.bsky.social
(looking for a postdoc btw)
add a skeleton here at some point
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you reached the end!!
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