🥁 Check out our new preprint on OmniPath, the prior knowledge resource for #SystemsBiology, and its brand-new OmniPath Explorer web app! 🥳 📖 Preprint: www.biorxiv.org/content/10.1... 🔍 Explorer: explore.omnipathdb.org OmniPath integrates 160+ resources for multi-omics analysis & modeling. 🧶⬇️

👀 we are involved in projects 1 & 6 on the list: 1️⃣ Multicellular molecular characterisation of inflammatory bowel disease 6️⃣ Designing Efficient Single-Cell Perturbation Experiments with Lab-in-the-Loop AI Agents 📅 Application deadline is 30th September ❗

🎉 The revised version of CORNETO, our unified Python framework for knowledge-driven network inference from omics data, is published in peer reviewed form 🔗 Paper: www.nature.com/articles/s42... 📖 News & Views: www.nature.com/articles/s42... 💻 Code: corneto.org 🧵 Thread 👇

🔧 decoupler 2.0.6 is out thanks to @paubadiam.bsky.social‬, now as a core @scverse.bsky.social package scverse.org This release includes a streamlined API aligned with scverse standards, updated vignettes, and a new one on pseudotime enrichment analysis 👇 decoupler.readthedocs.io/en/latest/

In this Voices article, our @martingarridorc.bsky.social & @juliosaezrod.bsky.social discuss key strategies for building context-specific molecular networks: knowledge and data-driven methods, + future directions in the field bridging to structures and perturbations tinyurl.com/z8t6yych

Ever wondered which method to use to infer kinase activities from phosphoproteomics data? 💻💭Our revised comprehensive evaluation of kinase activity inference tools, done in collaboration with the Zhang lab @bcmhouston.bsky.social, is now out @natcomms.nature.com 🔬 tinyurl.com/4twuc6z4

Here it is! Bonsai. Now there is really no more excuse for using t-SNE/UMAP. Bonsai not only makes cool pictures of your data. It actually rigorously preserves its structure. No tunable parameters. Incredible work by @dhdegroot.bsky.social. I'm so excited about this! www.biorxiv.org/content/10.1...

Move over mitochondria, a new organelle called the nitroplast is here. In a Science study last year, researchers reported that a nitrogen-fixing organelle has been identified in a marine alga. Learn more in this #SciencePerspective: scim.ag/49GjClc #ScienceMagArchives

MCML Blog: 🚨 Hate speech spreads fast — and it’s not just about detecting hate or profiling its authors. Who reshares it? Dominique Geissler, Abdurahman Maarouf & PI Stefan Feuerriegel analyzed the profiles of hate speech spreaders on social media. 🔍 📄 Read more: mcml.ai/news/2025-04...

Wrapping up in beautiful Ascona ☀️ for the Modern Benchmark Conference sites.google.com/view/ascona2.... Great to see the community discussing a field that’s essential yet often overlooked and challenging @smuellerdott.bsky.social @barbarazpc.bsky.social @ivanovaos.bsky.social @paubadiam.bsky.social

🇺🇦💙🇬🇧 Standing with Ukraine—enhancing OSINT for a safer future! Since day one, OSINT Industries has supported Ukrainian law enforcement with free access. Recently, EUAM Ukraine led a 4-day OSINT training at ХНУВС in Vinnytsia, equipping officers with advanced skills. Proud to support this mission!

Vevo therapeutics released their 100M perturbed single cell atlas! - git repo: github.com/ArcInstitute... - press release: www.prnewswire.com/news-release...