Nicolas Francillonne
@nico971.bsky.social
📤 85
📥 16
📝 8
Data manager à INRAE_URGI
reposted by
Nicolas Francillonne
URGI
about 2 months ago
We have made public the data from WP2 of the BreedWheat project. You can find this resources here
wheat-urgi.versailles.inrae.fr/Projects/Bre...
with the label WP2. You can find phenotyping data, genotyping data and association data.
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BreedWheat - WHEAT URGI
Content Management System
http://wheat-urgi.versailles.inrae.fr/Projects/BreedWheat
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reposted by
Nicolas Francillonne
Mariène Wan
4 months ago
Venez me voir au poster 2, pour découvrir l'URGI, une plateforme bio-informatique
@urgi-inrae.bsky.social
@jobim2025.bsky.social
#JOBIM2025
#URGI
#INRAE
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reposted by
Nicolas Francillonne
Mariène Wan
4 months ago
Venez découvrir
#REPET
, un outil de détection, de classification et d'annotation d'éléments transposables en live avec Etienne Bardet en amphi E
@jobim2025.bsky.social
@urgi-inrae.bsky.social
#JOBIM2025
#URGI
#INRAE
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reposted by
Nicolas Francillonne
Johann Confais
4 months ago
Vous êtes à
#JOBIM2025
et vous avez manquez le poster de
@marienewan.bsky.social
sur la nouvelle version de
#REPET
? Rassurez vous une demo est organisé aujourd'hui à midi en amphi E. Vous découvrirez toutes les évolutions mises en place pour vous faciliter l'annotation des
#transposons
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reposted by
Nicolas Francillonne
URGI
5 months ago
ELIXIR has released a position paper on open biodata, more information here
elixir-europe.org/news/positio...
or here
www.linkedin.com/posts/elixir...
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ELIXIR position paper on securing open biodata resources for European competitiveness | ELIXIR
https://elixir-europe.org/news/position%20paper%20funding
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reposted by
Nicolas Francillonne
URGI
7 months ago
Check this interview
wheatgenome.org/people/leade...
on IWGSC website from our Deputy Director at URGI
@michaelalaux.bsky.social
. His thoughts on Wheat Genomics and bioinformatics on the last few years and for the future.
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Michael Alaux
Michael Alaux is the Deputy Director of URGI (Unit Resources Genomics-Info) at the French National Research Institute for Agriculture, Food, and Environment (IN...
https://wheatgenome.org/people/leader-spotlight/michael-alaux
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reposted by
Nicolas Francillonne
Clément Goubert
10 months ago
The great
@johannconfais.bsky.social
on a reference-free approach (panREPET) to annotate
#Transposons
in
#pangenomes
🧬
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reposted by
Nicolas Francillonne
URGI
10 months ago
Great presentation from
@johannconfais.bsky.social
at
#PAG2025
#PAG32
on the first result obtained with panREPET tool a non reference centric approach
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reposted by
Nicolas Francillonne
Johann Confais
10 months ago
REPET got a complete overhaul in version 4.0 ! Etienne Bardet from
@urgi-inrae.bsky.social
presents the updates in
#PAG32
forgemia.inra.fr/urgi-anagen/...
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reposted by
Nicolas Francillonne
Johann Confais
10 months ago
Great tall from
@clementgoubert.bsky.social
to present GraffiTE: a pipline that finds polymorphic TE in genomes
#PAG32
github.com/cgroza/Graff...
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reposted by
Nicolas Francillonne
URGI
10 months ago
Vanita Haurheeram will be present at
#PAG2025
to introduce URGI service to FAIR research data management. Template, guidelines, repositories, data portals tool, come see her at POSTER80
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reposted by
Nicolas Francillonne
URGI
10 months ago
Maud Marty will be present at
#PAG2025
to introduce forest tree data in FAIDARE, a plant data discovery portal. You want to discover the forest tree data generated by the french community, let her guide you through the ecosystem
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@johannconfais.bsky.social
and
@clementgoubert.bsky.social
are presenting
@tehub.bsky.social
at
#PAG2025
, an amazing resource and driven community for anyone interested in transposable element
10 months ago
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reposted by
Nicolas Francillonne
Clément Goubert
10 months ago
#PAG32
I'd bet that every genome studied at PAG has a least 1
#Transposon
, if not thousands! Find us on Sunday for an exciting session on
#mobileDNA
!
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reposted by
Nicolas Francillonne
URGI
10 months ago
Great presentation from Michael Alaux in
#BrAPI
session
#PAG2025
, how the french community use BrAPI to share data between several tools
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reposted by
Nicolas Francillonne
URGI
10 months ago
URGI will be present at PAG 2025. We will talked about pangenomics, annotation tools, Data exchange and findability using BrAPI, Data management services, Forest tree data management, check the details here
urgi.versailles.inrae.fr/About-us/New...
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PAG 32 - URGI
Content Management System
https://urgi.versailles.inrae.fr/About-us/News/PAG-32
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📣
#hiringalert
#JobOpening
Rejoignez-nous en tant qu'ingénieur en données agronomiques @INRAE_URGI en CDD sur Versailles ou Toulouse. Info :
jobs.inrae.fr/ot-22883
@INRAE_DPT_BAP @INRAE_France @INRAE_IDF @INRAE_Tlse @Bioinf0mics @IFB_Bioinfo @UnivParisSaclay @SfbiFr
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Ingénieur-e données agronomiques
L’URGI, unité INRAE de recherche en bioinformatique dédiée à la génomique et à la génétique des plantes, recherche un ingénieur en données agronomiques, en contrat CDD pour 12 mois renouvelable. La pe...
https://jobs.inrae.fr/ot-22883
about 1 year ago
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C'est le moment de faire le bilan de ces 2 jours et de tracer la feuille de route pour l année à venir
#BReIF
#AgroDiv
AgroBRC_RARe INRAE_URGI
#France2030
Florilege, OLGA, IFB_Bioinfo
@inrae-france.bsky.social
#INRAE_DPT_BAP
#INRAE_DPT_GA
#INRAE_TOULOUSE
over 1 year ago
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C est parti pour l AG
#PEPR
à Toulouse pour les projets
#AgroDiv
et
#BReIF
. Ce 10 et 11 juillet, nous allons partager et discuter des avancées des projets
#France2030
AgroBRC_RARe Florilege, IFB_Bioinfo
@inrae-france.bsky.social
INRAE_DPT_BAP INRAE_DPT_GA
over 1 year ago
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Et c est reparti, 2e journée de l atelier pangénomique
@inrae-france.bsky.social
à Versailles du SaPI PanAnnot
#CATI_GREP
#CATI_BARIC
@johannconfais.bsky.social
On discute des outils de pangénomique et de leur impact sur nos thématiques de travail.
over 1 year ago
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reposted by
Nicolas Francillonne
Johann Confais
over 1 year ago
We are happy to announce that the recording of the last
#TEhub
workshop on
#benchmark
at
#ICTE2024
is available on our YouTube channel!
youtube.com/watch?v=3qY0...
Please share widely!
#Transposons
#TEsky
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Workshop: "developing benchmarks for TE research/bioinformatics" | ICTE24 | Saint-Malo, France
Complete video and audio recording (lightly edited for time) of the 2024 TE-Hub Workshop "TE Hub workshop: developing benchmarks for TE research/methods/tool...
https://youtube.com/watch?v=3qY06YxQpW0
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#ICTE2024
is starting
#TEworldwide
, INRAE-URGI is here with
@johannconfais.bsky.social
Somia Saidi, Héléna Vassilieff and Etienne Bardet, come see our posters and discuss
over 1 year ago
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reposted by
Nicolas Francillonne
Johann Confais
over 1 year ago
📢
#hiringalert
#JobOpening
#Concours
Rejoignez-nous en tant qu'ingénieur développeur de pipeline d'analyse et
#DevOps
@INRAE_URGI sur Versailles ou Toulouse. Plus d'info sur
urgi.versailles.inrae.fr/About-us/News/…
@inrae-france.bsky.soci
al
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3
2
📣
#hiringalert
#JobOpening
#Concours
Rejoignez-nous en tant qu'ingénieur développeur de pipeline d'analyse et
#DevOps
@INRAE_URGI sur Versailles ou Toulouse. Plus d'info sur
urgi.versailles.inrae.fr/About-us/New...
@INRAE_DPT_BAP @INRAE_France @INRAE_IDF @INRAE_TLSE @BIOINFOMICS @IFB_Bioinfo
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Poste IE - URGI
Content Management System
https://urgi.versailles.inrae.fr/About-us/News/Poste-IE
over 1 year ago
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