David Favero
@davefaveplants.bsky.social
📤 78
📥 121
📝 6
Senior Editor at Communications Biology. Plant biology. Views are my own.
reposted by
David Favero
Communications Biology
19 days ago
🌽🧬🐛 Together with
@natcomms.nature.com
and Scientific Reports, we invite articles in all areas of research investigating the roles of RNA in plant biotic interactions (including plant-microbe, plant-insect, and plant-plant interactions).
www.nature.com/collections/...
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RNA biology in plant biotic interactions
The editors invite articles in all areas of research investigating the roles of RNA in plant biotic interactions.
https://www.nature.com/collections/jfejjgacbg
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reposted by
David Favero
Communications Biology
21 days ago
🌱🦠🧫 Together with
@natcomms.nature.com
,
@natplants.nature.com
and Scientific Reports, we invite manuscripts that investigate plastid biology or explore the fundamental principles governing plastid origin, integration, and diversification across the eukaryotic tree of life.
go.sn.pub/z7b5je
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Plastids: from Phylogeny to Physiology
With this cross-journal Collection, the editors at Communications Biology, Nature Communications, Nature Plants, and Scientific Reports invite manuscripts ...
https://go.sn.pub/z7b5je
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reposted by
David Favero
Communications Biology
3 months ago
🍎🪰 Polyphagous fruit flies (Tephritidae) exhibit species-specific olfactory tuning to host fruit compounds, suggesting an evolved balance between detection and discrimination, with potential implications for ecological management and pest control strategies.
www.nature.com/articles/s42...
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Olfaction in fruit flies (Tephritidae) balances detection and discrimination of host fruits - Communications Biology
Challenging a central assumption in chemical ecology, we show that polyphagous fruit flies do not rely solely on volatiles shared across hosts: compounds specific to particular hosts shape oviposition...
https://www.nature.com/articles/s42003-026-09751-3
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reposted by
David Favero
Communications Biology
6 months ago
We welcome submissions of papers focused on genome assembly, population genetics, marker-trait association studies, gene cloning, and breeding technique development and implementation in orphan crops to our joint collection that includes
@natcomms.nature.com
@commssustain.nature.com
go.sn.pub/3gehui
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Orphan crop genomics and improvement 2025
This Orphan Crop Genomics and Improvement Collection welcomes submissions on orphan crops genomics, genetics, and breeding.
https://go.sn.pub/3gehui
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reposted by
David Favero
Communications Biology
6 months ago
New perspective 🦠: the ancestral evolutionary states of thylakoid membranes may have been initially dedicated to non-oxygenic alternative electron flows.
#cyanobacteria
@bccmcollections.bsky.social
@universitedeliege.bsky.social
www.nature.com/articles/s42...
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On the non-oxygenic origins of thylakoids - Communications Biology
The ancestral evolutionary states of thylakoid membranes may have been initially dedicated to non-oxygenic alternative electron flows.
https://www.nature.com/articles/s42003-025-09100-w
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reposted by
David Favero
Communications Biology
6 months ago
PBAT plastic exposure decreases taxonomic diversity across multi–kingdom soil microbiota, while enriching functional diversity, genome size, and genes for plastic degradation and carbon, nitrogen, phosphorus, and sulfur cycling.
www.nature.com/articles/s42...
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Biodegradable plastic exposure enhances microbial functional diversity while reducing taxonomic diversity across multi-kingdom soil microbiota in cherry tomato fields - Communications Biology
PBAT plastic exposure decreases taxonomic diversity across multi–kingdom soil microbiota, while enriching functional diversity, genome size, and genes for plastic degradation and carbon, nitrogen, pho...
https://www.nature.com/articles/s42003-025-09070-z
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reposted by
David Favero
Communications Biology
7 months ago
Metabolomic reprogramming in a high-yield ginger cultivar shapes microbiome assembly, enriching keystone taxa like Devosia and Talaromyces, which enhance nutrient cycling and yield, offering a basis for microbiome-informed crop design.
doi.org/10.1038/s420...
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Metabolome-driven microbiome assembly in ginger (Zingiber officinale) enhances nutrient cycling and crop yield through keystone taxa - Communications Biology
Metabolomic reprogramming in a high-yield ginger cultivar shapes microbiome assembly, enriching keystone taxa like Devosia and Talaromyces, which enhance nutrient cycling and yield, offering a basis f...
https://doi.org/10.1038/s42003-025-08910-2
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reposted by
David Favero
Communications Biology
7 months ago
A warm welcome to Dr. Vincent Courdavault, who joins our Plant Biology section as an editorial board member! Their work in plant specialized metabolism, alkaloids, plant genetic transformation, yeast engineering and muti-omics approaches will be a valuable addition. Welcome aboard! 🌱🧬
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reposted by
David Favero
Communications Biology
7 months ago
Single-cell profiling in rubber tree saplings to water-deficit stress identifies seven bark cell types and ABA-mediated drought responses, including uniform ABF2/3/4 induction.
www.nature.com/articles/s42...
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Transcriptomic response analysis of rubber tree saplings to water-deficit stress at single-cell resolution - Communications Biology
Single-cell profiling in rubber tree saplings to water-deficit stress identifies seven bark cell types and ABA-mediated drought responses, including uniform ABF2/3/4 induction.
https://www.nature.com/articles/s42003-025-09046-z
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reposted by
David Favero
Communications Biology
7 months ago
🧬🌿 Dr. Taikui Zhang is joining our editorial board in the Ecology & Evolution section! Dr. Zhang brings expertise in angiosperms, (pan-)genomics, evolutionary genomics, phylogenomics, whole genome duplications, and bioinformatics. Welcome aboard! 🌱
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reposted by
David Favero
Communications Biology
7 months ago
This new study in Communications Biology provides evidence on how carbon metabolism regulates cell division among cyanobacteria. TCA pathway manipulation directly impacts the FtsZ-dependent cell division by regulating its expression via the transcriptional factor NtcA. 🦠
doi.org/10.1038/s420...
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Carbon metabolism shapes FtsZ levels and cell division in the cyanobacterium Anabaena PCC 7120 - Communications Biology
This study provides evidence on how carbon metabolism regulates cell division among cyanobacteria. Manipulation of the TCA pathway directly impacts the FtsZ-dependent cell division by regulating its e...
https://doi.org/10.1038/s42003-025-08849-4
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reposted by
David Favero
PlantEvolution 🌱🌾
8 months ago
Congrats, Joe Ecker
@salkinstitute.bsky.social
, to receiving the McClintock Prize! Joe has been a visionary leader of the field of genetics and genomics – not only for plants – for decades
www.salk.edu/news-release...
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reposted by
David Favero
Communications Biology
10 months ago
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reposted by
David Favero
Communications Biology
10 months ago
Reciprocal cooperation at the early stage between an arbuscular mycorrhizal fungus and a phosphate-solubilizing bacterium is mediated by external phosphorus availability.
www.nature.com/articles/s42...
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Early-stage reciprocal cooperation between the arbuscular mycorrhizal fungus Rhizophagus irregularis and the phosphate-solubilizing bacterium Rahnella aquatilis is dependent on external phosphorus ava...
Reciprocal cooperation at the early stage between an arbuscular mycorrhizal fungus and a phosphate-solubilizing bacterium is mediated by external phosphorus availability.
https://www.nature.com/articles/s42003-025-08501-1
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reposted by
David Favero
Communications Biology
11 months ago
Our editor Michele Repetto is at the Ecological and Evolutionary Genomics
#GRC
meeting, Dynamics of Ecological and Evolutionary Change. Find her at the conference for a chat about your research and publishing with our journal!
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reposted by
David Favero
Communications Biology
11 months ago
A lab experiment shows that Dark Septate Endophytes can form common fungal networks between plants, increasing biomass and enabling water movement, suggesting that non-mycorrhizal fungi may contribute to plant connectivity.
www.nature.com/articles/s42...
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Evidence for common fungal networks among plants formed by a Dark Septate Endophyte in Sorghum bicolor - Communications Biology
A lab experiment shows that Dark Septate Endophytes can form common fungal networks between plants, increasing biomass and enabling water movement, suggesting that non-mycorrhizal fungi may contribute...
https://www.nature.com/articles/s42003-025-08432-x
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reposted by
David Favero
Luiselotte Rausch
11 months ago
The best part of conferences: Meeting old friends and making new ones 😊
@davefaveplants.bsky.social
@keikosugimoto.bsky.social
@ipgsa2025.bsky.social
#IPGSA
#plantscience
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Have expertise in computational biology? Our journal is looking for a Locum Associate Editor with expertise in this area.
springernature.wd3.myworkdayjobs.com/SpringerNatu...
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Locum Associate Editor
Job Description: Job Title: Locum Associate Editor - Communications Biology Location: Pune or Shanghai (Hybrid working) Nature Portfolio is the world’s leader in publishing high-quality research from ...
https://springernature.wd3.myworkdayjobs.com/SpringerNatureCareers/job/Pune-Karvenagar/Locum-Associate-Editor_JR103465
11 months ago
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In transit now to Luxembourg to represent
@commsbio.nature.com
at the Phytofactories 2025 meeting. If you're attending, stop by and chat with me during the meet-the-editor session tomorrow (Wednesday) from 5:30-7:00 PM!
eventform.plantae.org/plantae.cale...
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Phytofactories 2025
Wed 18 Jun, 10:30 AM - Fri 20, 4:00 PM [EDT]: Phytofactories 2025, an international conference on Plant Molecular Farming, hosted by the Luxembourg Institute of Science and Technology (LIST), will tak...
https://eventform.plantae.org/plantae.calendar/detail/1338/1750257000000
11 months ago
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reposted by
David Favero
Communications Biology
12 months ago
Photosynthetic
#sacoglossan
sea slugs lose state transitions due to structural changes of their kleptoplasts, whereas Bryopsidales
#algae
show an evolutionary loss of state transitions, highlighting the diverse light-use strategies of green algae.
www.nature.com/articles/s42...
@vesahavu.bsky.social
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reposted by
David Favero
Communications Biology
12 months ago
Smallholder-maintained
#cowpea
varieties in Southern Africa hold valuable genetic traits for adapting to a changing climate, offering key insights for breeding resilient
#crops
and strengthening future food security.🌍
@mdellacq.bsky.social
www.nature.com/articles/s42...
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Cowpea (Vigna unguiculata L. Walp.) landraces in Mozambique and neighbouring Southern African countries harbour genetic loci with potential for climate adaptation - Communications Biology
Smallholder-maintained cowpea varieties in Southern Africa hold valuable genetic traits for adapting to a changing climate, offering key insights for breeding resilient crops and strengthening future ...
https://www.nature.com/articles/s42003-025-08227-0
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reposted by
David Favero
Communications Biology
12 months ago
Resequencing of a core collection of tef, an indigenous cereal, identifies genetic redundancy and candidate genes for grain colour, size and metabolite content variation.
www.nature.com/articles/s42...
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Population genomics uncovers loci for trait improvement in the indigenous African cereal tef (Eragrostis tef) - Communications Biology
Resequencing of a core collection of tef, an indigenous cereal, identifies genetic redundancy and candidate genes for grain colour, size and metabolite content variation.
https://www.nature.com/articles/s42003-025-08206-5
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reposted by
David Favero
Communications Biology
about 1 year ago
🌱A study on the response of different resistant Amorphophallus species to Pcc stress reveals that endophytic fungal taxa play a key role in host plant's defense against necrotizing bacterial pathogens.
doi.org/10.1038/s420...
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Changes in the assembly and functional adaptation of endophytic microbial communities in Amorphophallus species with different levels of resistance to necrotrophic bacterial pathogen stress - Communic...
A study on the response of different resistant Amorphophallus species to Pcc stress reveals that endophytic fungal taxa play a key role in host plant’s defense against necrotizing bacterial pathogens.
https://doi.org/10.1038/s42003-025-08196-4
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Featured on the
@commsbio.nature.com
homepage: in a genus of perennial herbs (Aquilegia spp) incomplete lineage sorting contributes to phenotypic convergence in a recent cryptic radiation while standing genetic variation and introgression facilitate rapid adaptive divergence
www.nature.com/commsbio/
about 1 year ago
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reposted by
David Favero
Communications Biology
about 1 year ago
🌳🌱Last days to submit to our cross-journal Collection with
@natcomms.nature.com
& Scientific Reports on plant responses and adaptations to abiotic stress:🌲🪴
www.nature.com/collections/...
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reposted by
David Favero
Communications Biology
about 1 year ago
Our 2025 cross-journal Collection on biotechnology for a circular economy on one carbon assimilation, bio-manufacturing, waste management, recycling, bio-energy, including computational methodology on the above fields, will present updates to our 2023 collection:
www.nature.com/collections/...
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Biotechnology for a circular economy 2025
This collection welcomes research in, but not limited to carbon assimilation, biomanufacturing, waste management, and bioenergy. We are also interested in ...
https://www.nature.com/collections/ahiafijcag
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reposted by
David Favero
Communications Biology
about 1 year ago
MusaPUB22/23 knockout in banana plants enhances resistance to Xanthomonas wilt (BXW) without compromising growth. These findings highlight the role of U-box E3 ligases in plant immunity and the potential of using this approach for disease-resistant crop engineering
www.nature.com/articles/s42...
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Loss of function of MusaPUB genes in banana can provide enhanced resistance to bacterial wilt disease - Communications Biology
MusaPUB22/23 knockout in banana plants enhances resistance to Xanthomonas wilt (BXW) without compromising growth. These findings highlight the role of U-box E3 ligases in plant immunity and the potent...
https://www.nature.com/articles/s42003-025-08093-w
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reposted by
David Favero
Communications Biology
about 1 year ago
An L-aminoacylase in the oral secretion of fall armyworm larvae attenuates inducible plant defense responses by degrading herbivore-associated signal molecules and promotes larvae growth on their preferred host plant species.
doi.org/10.1038/s420...
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The Spodoptera frugiperda L-aminoacylase degrades fatty acid-amino acid conjugates and promotes larvae growth on Zea mays - Communications Biology
An L-aminoacylase in the oral secretion of fall armyworm larvae attenuates inducible plant defense responses by degrading herbivore-associated signal molecules and promotes larvae growth on their pref...
https://doi.org/10.1038/s42003-025-08048-1
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reposted by
David Favero
Shahid Mukhtar
about 1 year ago
🚨 Postdoc and Lab Tech Opportunities🌱🔬 We are hiring a Postdoctoral Researcher and a Lab Technologist to join our dynamic lab at Clemson Univ. The area of interests are single cell and spatial biology. RT and DM
apply.interfolio.com/158814
nam12.safelinks.protection.outlook.com?url=https%3A...
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reposted by
David Favero
Ryo Yokoyama
about 1 year ago
Mechanisms of plant acclimation to multiple abiotic stresses
www.nature.com/articles/s42...
@commsbio.bsky.social
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Mechanisms of plant acclimation to multiple abiotic stresses - Communications Biology
A review summarizes the current understanding of the complex molecular pathways mediating plant responses to multiple abiotic stresses, and discusses current and future challenges and unanswered quest...
https://www.nature.com/articles/s42003-025-08077-w
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reposted by
David Favero
Nature
about 1 year ago
Researchers pinpoint the genes responsible for the final three pea traits studied by Gregor Mendel more than 160 years ago
https://go.nature.com/3EC3eqT
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Century-old genetics mystery of Mendel’s peas finally solved
Researchers pinpoint the genes responsible for the final three pea traits studied by the famed citizen scientist.
https://go.nature.com/4lIMI9d
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reposted by
David Favero
Communications Biology
about 1 year ago
A study on rice pollination using single-cell metabolomics and microscopy reports a discovery such that pollen grains attached show "Roly-poly toy"-like physical motion subsequently after exudation, leading to pollen adhesion and germination to facilitate rapid pollination.
doi.org/10.1038/s420...
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reposted by
David Favero
Communications Biology
about 1 year ago
Barley landraces house unique variation that can help adapt this food crop to a changing climate. A de-novo core collection is used to predict which individual barley landraces have the most potential to help with adaptation to adverse environments.
doi.org/10.1038/s420...
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Environmental genomic selection to leverage polygenic local adaptation in barley landraces - Communications Biology
Barley landraces house unique variation that can help adapt this food crop to a changing climate. A de-novo core collection is used to predict which individual barley landraces have the most potential...
https://doi.org/10.1038/s42003-025-08045-4
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reposted by
David Favero
Communications Biology
about 1 year ago
Highlighted today in
@phys.org.web.brid.gy
, development of a mathematical model provides a non-linear dynamics explanation for the formation of petal patterns in broken tulips. Article on
Phys.org
:
phys.org/news/2025-04...
Original article 👇
www.nature.com/articles/s42...
PC: Thomas Hillen
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reposted by
David Favero
Communications Biology
about 1 year ago
🧬🌿 Comparative genomic study of the Colletotrichum gloeosporioides species complex provides insights into the role of chromosomal rearrangements, mediated by repetitive sequences, drive genetic diversification and host adaptation in the phytopathogens
doi.org/10.1038/s420...
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Phylogenomics and adaptive evolution of the Colletotrichum gloeosporioides species complex - Communications Biology
Comparative genomic study of the Colletotrichum gloeosporioides species complex provides insights into the role of chromosomal rearrangements, mediated by repetitive sequences, drive genetic diversifi...
https://doi.org/10.1038/s42003-025-08024-9
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reposted by
David Favero
Communications Biology
about 1 year ago
Welcoming our newest Communications Biology Editorial Board members this month! 😊 First up, a big welcome to Yuhong Cao, joining our Bioengineering & Biotech team! Yuhong brings expertise in mRNA technology, circRNA sequencing design, plant genome engineering & breeding, and nanotechnology.
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reposted by
David Favero
Communications Biology
about 1 year ago
An alignment-free deep learning framework predicts DNA-binding proteins and residues from primary sequences, eliminating multiple sequence alignments (MSAs). It uses protein language models and class-weighted training to address data imbalance and improve accuracy
doi.org/10.1038/s420...
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TransBind allows precise detection of DNA-binding proteins and residues using language models and deep learning - Communications Biology
An alignment-free deep learning framework predicts DNA-binding proteins and residues from primary sequences, eliminating multiple sequence alignments (MSAs). It uses protein language models and class-...
https://doi.org/10.1038/s42003-025-07534-w
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reposted by
David Favero
Communications Biology
about 1 year ago
Our editor Laura will be giving a talk at the
@universidadoviedo.bsky.social
this Thursday 10th at 1pm, please come if you want to learn more about our journal and the editorial process in the Nature Portfolio!
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The gibberellic acid phytohormone biosynthesis inhibitor paclobutrazol induces triterpenoid biosynthesis in the fungus Sanghuangporus lonicericola.
add a skeleton here at some point
about 1 year ago
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reposted by
David Favero
Communications Biology
about 1 year ago
Microscopic imaging and machine learning reveal coordinated spatial patterns of chloroplasts and stomata during cacao leaf development, suggesting an acropetal maturation process crucial for flush growth.
www.nature.com/articles/s42...
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Spatial patterning of chloroplasts and stomata in developing cacao leaves - Communications Biology
Microscopic imaging and machine learning reveal coordinated spatial patterns of chloroplasts and stomata during cacao leaf development, suggesting an acropetal maturation process crucial for flush gro...
https://www.nature.com/articles/s42003-025-08019-6
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reposted by
David Favero
Communications Biology
about 1 year ago
Grains suppress ovaries in ears of maize to strengthen their sugar utilization advantage for development, potentially through hormone and MAPK signaling.
www.nature.com/articles/s42...
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Siblicide between fertilized and unfertilized ovaries within the maize ear - Communications Biology
Grains suppress ovaries in ears of maize to strengthen their sugar utilization advantage for development, potentially through hormone and MAPK signaling.
https://www.nature.com/articles/s42003-025-07784-8
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reposted by
David Favero
Communications Biology
about 1 year ago
An sRNA study in Arabidopsis reveals that a tRF drives immunity via DCL1 and AGO2, activating defense genes, suppressing Gypsy retrotransposons, and binding chromatin to coordinate transcriptional reprogramming in a sequence-dependent manner.
www.nature.com/articles/s42...
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A nuclear tRNA-derived fragment triggers immunity in Arabidopsis - Communications Biology
An sRNA study in Arabidopsis reveals that a tRF drives immunity via DCL1 and AGO2, activating defense genes, suppressing Gypsy retrotransposons, and binding chromatin to coordinate transcriptional rep...
https://www.nature.com/articles/s42003-025-07737-1
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reposted by
David Favero
Communications Biology
about 1 year ago
An autonomous robotic platform enables high-throughput, low-cost, and high-volume phenotypic measurements in maize canopies, facilitating the understanding of genotype, environment, and management interactions (GxExM) with high accuracy.
@earthsense-inc.bsky.social
www.nature.com/articles/s42...
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reposted by
David Favero
Ronald Pierik
about 1 year ago
VRN2-PRC2 facilitates light-triggered repression of PIF signaling to coordinate growth in Arabidopsis. Great work from
@djgibbs.bsky.social
lab together with
@sjonhartman.bsky.social
and
@ekaiserli.bsky.social
Developmental Cell
www.cell.com/developmenta...
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VRN2-PRC2 facilitates light-triggered repression of PIF signaling to coordinate growth in Arabidopsis
Osborne et al. show that the angiosperm-specific PRC2 subunit VRN2 is enriched in hypoxic regions of the Arabidopsis shoot, where it is required for stable deposition of H3K27me3 in key PIF4 target ge...
https://www.cell.com/developmental-cell/fulltext/S1534-5807%2825%2900122-4
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reposted by
David Favero
Ryo Yokoyama
about 1 year ago
Characterization of Arabidopsis thaliana thylakoid lumen 7.6 protein functions in photosystem II assembly
www.nature.com/articles/s42...
@commsbio.bsky.social
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Characterization of Arabidopsis thaliana thylakoid lumen 7.6 protein functions in photosystem II assembly - Communications Biology
A thylakoid lumen protein, TLP7.6, functions as an auxiliary factor for cyclophilin 38 to facilitate PSII assembly and stability in Arabidopsis. Double mutation of these two genes results in impaired ...
https://www.nature.com/articles/s42003-025-07907-1
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Interesting Behind the Paper blog post about a study that was recently published in
@commsbio.bsky.social
as part of the Plant microbiomes Collection! Read the original article here:
www.nature.com/articles/s42...
Check out other papers in the Collection here:
www.nature.com/collections/...
add a skeleton here at some point
about 1 year ago
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Featured on the
@commsbio.bsky.social
homepage this week, investigation of pollen cellular respiration and pollen-silk interactions led to development of an accessible protocol that can preserve maize pollen viability for up to 7 days at hybrid seed production scale
www.nature.com/articles/s42...
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Development of accessible and scalable maize pollen storage technology - Communications Biology
Investigation of Zea mays (maize, corn) pollen cellular respiration and pollen-silk (stigma) interactions leads to the development of an accessible protocol that can preserve maize pollen viability fo...
https://www.nature.com/articles/s42003-025-07864-9
about 1 year ago
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reposted by
David Favero
Communications Biology
about 1 year ago
🌱As part of a new joint Collection with
@naturecomms.bsky.social
and Scientific Reports, we welcome submissions on the ‘hidden half’ of plants, including studies exploring mechanisms underlying root establishment, functions, and responses to biotic and abiotic factors
www.nature.com/collections/...
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Root Biology
This cross-journal collection welcomes research and reviews on mechanisms of plant root growth, functions, and interaction with biotic and abiotic factors and ...
https://www.nature.com/collections/hgefdgbfjf
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reposted by
David Favero
Communications Biology
about 1 year ago
Incredible: New proof that
#bumblebee
queens destroy leafs (probably helping to found new colonies)! This again can accelerate flowering :) From researchers
@ethzurich.bsky.social
www.nature.com/articles/s42...
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Leaf-damaging behavior by queens is widespread among bumblebee species - Communications Biology
Experiments with captive and wild queens show that leaf-damaging behavior is widespread among bumblebee species and can accelerate plant flowering.
https://www.nature.com/articles/s42003-025-07670-3
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