ReCoN: REconstruction of multicellular COrdination Network We are releasing a new tool to model multicellular coordination and cellular responses in tissu! 🫀🫁 The package is just out, and the preprint should follow within a few days😇 If you want to have a look already: github.com/cantinilab/R...

Can't wait to be at @jobim2025.bsky.social #JOBIM25 to present a short demo on the companion ShinyApp (shorturl.at/Os7kB) of our review "Cell-type deconvolution for spatial transcriptomics" recently published in @natrevgenet.nature.com ! #spatial #genomics

Last week to register ! Don't miss this great opportunity

Yes, there's "accessible" in my group's title. Come at me, Trump! Just kidding, don't come at me, except if you're looking for a job in biomedical AI. Hiring at all levels, up to 100% of E13. If you're enthusiastic about science and open source, consider applying! Please help spread the word. :)

Big turnout today in Paris to show solidarity with US-based scientists ❤️ 🗽 #StandUpforScienceFrance @pasteur.fr

Very grateful to have been awarded a #MSCA post-doc fellowship! With Felix Hol and Teun Bousema, we will bring BuzzWatch to the field to study mosquito behavior in malaria-endemic regions. Starting in #RadboudUmc, our first goal is to make BuzzWatch portable enough to be transported by bicycle 🦟🚲🇳🇱.

Applying LLMs to biomedical research today can go one of two ways: we either use a closed-source web app, or we get coding ourselves. Many researchers lack training for the latter, so their only choice is the former. We want to change that. www.nature.com/articles/s41...

Thrilled to share 'BuzzWatch', my post-doc work with Felix Hol and @lambrechtslab.bsky.social ➡️Filming mosquitoes in a cage with a €15 camera but for 700h(1month) revealed fascinating insights into their behavior⌛🦟🎥⏳ preprint🔍 doi.org/10.1101/2025... DIY guide 🛠️ theomaire.github.io/buzzwatch 🧵⬇️

The Mathematics of Artificial Intelligence: In this introductory and highly subjective survey, aimed at a general mathematical audience, I showcase some key theoretical concepts underlying recent advancements in machine learning. arxiv.org/abs/2501.10465

Excited to share our latest #research from @institutcurie.bsky.social on multimodal prediction of #immunotherapy outcome in #lungcancer, published with @springernature.bsky.social in @naturecomms.bsky.social rdcu.be/d56Fn @fondationarc.bsky.social & [PRAIRIE Institute](prairie-institute.fr)

Excited to share the final work from my PhD: our study on developing a signalling network gathering the molecular dysregulations caused by the absence of CFTR in cystic fibrosis (CF). Read the full article published in the journal BMC Genomics at: doi.org/10.1186/s128... 1/5