We are #hiring a Stage for a 6 mois period on Analysis of spatial patterns formed during Prion dissemination in cerebellar tissue., starting 2026-03-02. Application to Katarzyna Adamczyk, Florence Hubert, Mathieu Mezache, by 2026-01-30. More information at maiage.inrae.fr/node/3452.

🔷 Séminaire Schéma Stratégique du Département MathNum à Montpellier — une belle dynamique collective ! Plus d'info : www.linkedin.com/feed/update/...

We are delighted to #welcome BOSSE Paul for a CDD on Development of digital tools for participatory epidemiological surveillance of wheat diseases as part of the PAPEETE project until 2026-10-31. A #collaboration with Florence Carpentier. More information at maiage.inrae.fr/node/3444.

We are delighted to #welcome Buttimore Aidan for a Doctorant.e on Robust inference in Hidden Markov Models until 2028-10-31. A #collaboration with Estelle Kuhn, Zacharie Naulet. More information at maiage.inrae.fr/node/3439.

We are #hiring a Stage for a 6 mois period on Benchmark et développement d’un workflow d’identification et d’annotation de génomes de bactériophages., starting 2026-01-01. Application to Cédric MIDOUX, Valentin LOUX, Eric DUGAT-BONY, by 2026-06-30. More information at maiage.inrae.fr/node/3437

We are delighted to #welcome PRAGASSAM Anthony for a Fixed-term contract as an engineer in Galaxy component development until 2028-01-31. A #collaboration with Valentin Loux. More information at maiage.inrae.fr/node/3428.

We are #hiring a Stage for a 6 mois period on Exploration of the pangenome to automatically delineate ICE and IME mobile elements, starting 2026-01-01. More information at maiage.inrae.fr/node/3422.

We are #hiring a Stage for a 6 mois period on Detecting genomic modules across multiple pangenomes using MultiGraph Neural Network, starting 2026-01-01. More information at maiage.inrae.fr/node/3421.

We are delighted to #welcome BERNE Edmond for a CDD on "Holobionts data integration" until 2026-09-30. A #collaboration with Olivier Rué, Fabrice Legeai. More information at maiage.inrae.fr/node/3417.

We are delighted to #welcome FERNANDEZ Émilie for a CDD on "Development of the Ferments du Futur data warehouse" until 2032-12-15. A #collaboration with Loux, V. More information at maiage.inrae.fr/node/3416.

Organisation of and participation in a workshop at Caltech, Pasadena, California, on the theme of ‘Multiscale modelling of ocular and cardiovascular systems’ from 29 September to 3 October 2025. At the American Institute of Mathematics. More information aimath.org/workshops/up...

We are #hiring a Stage for a 6 mois period on Development of workflows for pangenome graph functional annotation at large scale, starting 2026-01-05. More information at maiage.inrae.fr/node/3413.

We are thrilled to be involved in the Statistics and machine learning predictive tools for transition toward sustainable agriculture: dynamic modeling and heterogeneous population #project. More information at maiage.inrae.fr/node/3080.

We are delighted to #welcome MARINO Thomas for a Doctorant.e on Mfd profiling and dynamic reshaping until 2028-09-30. A #collaboration with Sylvain Martheyet Gwenaëlle André à MaIAGE Gwenaëlle ANDRE (70%) et Nalini Rama Rao (30%). More information at maiage.inrae.fr/node/3405.

We are delighted to #welcome GUEDOUAR Sana for a CDD on Adaptation de l’application Genoscapist pour l’étude de l’hétérogénéité phénotypique et l’adaptation à l'hôte pendant la phase stationnaire chez les Firmicutes pathogènes sporulants until 2026-03-31. More: maiage.inrae.fr/node/3404.

We are delighted to #welcome VÉRON Joséphine for a CDD on Développement d'un système de culture en mini-bioréacteurs couplés pour limiter le développement de biofilms. until 2026-06-30. A #collaboration with GUÉRIN Cyprien/ More information at maiage.inrae.fr/node/3398.

We are thrilled to be involved in the Plate-forme de CULTuromique partagée pour accéder à un large répertoire de mIcro-organismes, dont les non cultivéS, afin de comprendre les fonctions cléS des microbIoMes sur les écOsystèmes humains #project. More information at maiage.inrae.fr/node/3397.

We are delighted to #welcome LACOUR Geoffrey for a Post-doc on Modélisation mathématique et outils numériques pour l’analyse et la prédiction de consortia microbiens until 2026-10-31. A #collaboration with Beatrice Laroche, Lorenzo Sala. More information at maiage.inrae.fr/node/3396.

We are delighted to #welcome JOCHEL Jessy for a CDD on Gestionnaire d'unité until 2026-08-31. A #collaboration with Khadija El-Mourabit, Aurore Lenfant. More information at maiage.inrae.fr/node/3395.

We are delighted to #welcome LAMY Oriane for a CDD on Apprentissage : Développement de méthodes pour la détection de flux de souches à partir de données métagénomiques shotgun et application aux écosystèmes vigne-vin. A #collaboration with AL Abraham, G Kon Kam King. More maiage.inrae.fr/node/3394.

We are delighted to #welcome YOUSSEF Meriem for a Doctorant.e on Modèles de langage à l'échelle des graphes de pangénomes pour la prédiction de fonctions biologiques until 2028-09-30. A #collaboration with Guillaume GAUTREAU Alexandra CALTEAU; David VALLENET. More maiage.inrae.fr/node/3392.

We are thrilled to be involved in the Dietary Enteral Fibers in ENterobacteriaceae gut-colonized intenSIVE care patients #project. A great #collaboration with partners : CIIL (Univ. Lille); EPE (Univ. Lille); CHU Lille; MICALIS, persons : L. Sala; B. Laroche. More maiage.inrae.fr/node/3060.

We are thrilled to be involved in the Determining the role of HYPHospheric bacteria in the Arbuscular mycorrhizal fungi-mediated nutrient supply and growth promotion of MAIZE under low-input agriculture #project. More information at maiage.inrae.fr/node/3061

We are thrilled to be involved in the "Determining the role of HYPHospheric bacteria in the Arbuscular mycorrhizal fungi-mediated nutrient supply and growth promotion of MAIZE under low-input agriculture" #project. Researchers involved: O. Rué, V. Loux, H. Chiapello. More maiage.inrae.fr/node/3244.

We are thrilled to be involved in the HyphAMaize #project. A great #collaboration with: Institut Jean-Pierre BOURGIN, Laboratoire de recherche en sciences vegetales, Agronutrition SA, UNL (USA), INRAE GeT. More information at maiage.inrae.fr/node/3244. Image designed by Freepik.

We are thrilled to be involved in the Robustness Assessment of LLM by designing evaluation metrics and by LLM experiments #project. A great #collaboration with Huazhong Agricultural University (HZAU), China. More information at maiage.inrae.fr/node/3331. Image designed by Freepik.

Solène Pety will present at #JOBIM2025 on 11 July at 10:10 am in Amphi D, discussing RITHMS: An advanced stochastic framework for simulating transgenerational hologenomic data. #holobiont #genotype #microbiota #simulationframework @mahendram.bsky.social

Meet Agnès Barnabé on July 9th at #JOBIM2025 at the poster session to talk about SIDURI: from an integrative information system to a user-friendly portal for data analysis #fermentsdufutur @vloux.bsky.social @sophieschbath.bsky.social @inrae-migale.bsky.social

Meet Hanin Ali on July 9th at #JOBIM2025 at the poster session to talk about Bridging gene-level and sequence-level pangenome graph to explore microbial diversity #INRAE #MaIAGE @guigau.bsky.social #UniversiteLille #CRIStAL @camillemrcht.bsky.social

L'unité MaIAGE via la plateforme #bioinformatique @inrae-migale.bsky.social participera au #JobFair de #JOBIM2025 Pensez à vous #inscrire via forms.gle/rFPD8aGKRSrW... pour participer aux #echanges❗

Meet Christelle Hennequet-Antier on July 8th at #JOBIM2025 at the poster session to talk about StatOmique: sharing experience on statistical analysis of omics data statomique.github.io #GDRBIMMM #Statistique #Omiquedata

Meet Anne-Laure Abraham on July 8th at #JOBIM2025 at the poster session to talk about Bacterial transfers in dairy systems under changing farming practices #INRAE #MaIAGE #UMRF #Holoflux

Meet Hajar Bouamout on July 8th at #JOBIM2025 at the poster session to talk about HoloOligoDB: an open platform for the exploration of milk oligosaccharides in mammalian species #database #webinterface #oligosaccharide @sandraderozier.bsky.social @vloux.bsky.social @inrae-migale.bsky.social

Meet Sylvain Marthey on July 8th at #JOBIM2025 for a demonstration about WHOOPER Web application for Hands-On identification of proteins co-Occurrence among Phyla, focused on user ERgonomics (Amphi D at 6 pm) #webapplication #proteins #evolution #datavisualization #userergonomics

🎉 Vendredi dernier, l'unité #maiage était en #fete‼️ #barbecue, #tournoi de #tennisdetable, #cupcakechallenge, #animations en tous genres pour fêter les #10ans de notre unité🎂 Un beau moment de #partage‼️

We are thrilled to be involved in the Deciphering plant-microbiota interactions to enhance crop defenses to pests #project. A great #collaboration with partners : INRAE, CNRSpersons : M. Mariadassou, S. Schbath. More information at maiage.inrae.fr/node/1027

We are #hiring a CDD for a 7 ans period on Ingénieur-e en développement de systèmes d'information, starting 2025-09-01. Application to Loux Valentin, [email protected], Schbath Sophie, [email protected] by 2025-06-20. More information at maiage.inrae.fr/node/3327

Trainings of the “Cycle bioinformatique par la pratique” 2025 Tidyverse : documents.migale.inrae.fr/posts/traini... Python : documents.migale.inrae.fr/posts/traini...

Bravo aux auteurs et autrices pour cette publication majeure dans la lutte contre l'antibiorésistance ! Félicitations notamment à Samantha Samson et Gwenaëlle André dans notre unité pour leur analyse de la structure 3D de la protéine Mfd. 🔗 en savoir plus : www.linkedin.com/posts/unite-...

We are thrilled to be involved in the ECOMIC #project: ECOnomic framework for MICrobial resources. A great #collaboration with Pilier Microbien de RARe - 10 CRB: CIRM/CRBIP/SAMBO/CRB-FAN. More information at maiage.inrae.fr/node/3310. Image designed by Freepik.

We're offering a fully funded PhD to work on new methods for microbial #pangenomics using #LLM in collaboration with @guigau.bsky.social and Christophe Ambroise. labgem.genoscope.cns.fr/2025/03/17/f... Apply before April 27th. @genoscopeumr.bsky.social @cea-paris-saclay.bsky.social

On recrute un-e bioinformatien-ne permanent-e dans l'équipe pour renforcer notre service d'analyse ! 🏡 Nous faisons partie de l'unité de recherche @inrae-maiage.bsky.social en Île-de-France. N'hésitez pas à me contacter ou @vloux.bsky.social si vous êtes intéressé-e

The INRAE MaIAGE unit has joined the #bluesky network! We extend a warm welcome to all those who join us. Don't hesitate to follow us on our other platforms too: linktr.ee/INRAE.MaIAGE 🙂

L'unité INRAE MaIAGE fait son apparition sur le réseau #bluesky ! Nous souhaitons la bienvenue à celles et ceux qui nous rejoignent. N'hésitez pas à nous suivre également sur nos autres plateformes : linktr.ee/INRAE.MaIAGE 🙂