Unité INRAE MaIAGE
@inrae-maiage.bsky.social
📤 55
📥 25
📝 43
Unité Mathématique et informatique appliquées du génome à l’environnement (MaIAGE – UR INRAE)
We are
#hiring
a Stage for a 6 mois period on Analysis of spatial patterns formed during Prion dissemination in cerebellar tissue., starting 2026-03-02. Application to Katarzyna Adamczyk, Florence Hubert, Mathieu Mezache, by 2026-01-30. More information at
maiage.inrae.fr/node/3452
.
3 days ago
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🔷 Séminaire Schéma Stratégique du Département MathNum à Montpellier — une belle dynamique collective ! Plus d'info :
www.linkedin.com/feed/update/...
3 days ago
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We are delighted to
#welcome
BOSSE Paul for a CDD on Development of digital tools for participatory epidemiological surveillance of wheat diseases as part of the PAPEETE project until 2026-10-31. A
#collaboration
with Florence Carpentier. More information at
maiage.inrae.fr/node/3444
.
7 days ago
0
1
0
We are delighted to
#welcome
Buttimore Aidan for a Doctorant.e on Robust inference in Hidden Markov Models until 2028-10-31. A
#collaboration
with Estelle Kuhn, Zacharie Naulet. More information at
maiage.inrae.fr/node/3439
.
7 days ago
0
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We are
#hiring
a Stage for a 6 mois period on Benchmark et développement d’un workflow d’identification et d’annotation de génomes de bactériophages., starting 2026-01-01. Application to Cédric MIDOUX, Valentin LOUX, Eric DUGAT-BONY, by 2026-06-30. More information at
maiage.inrae.fr/node/3437
19 days ago
0
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3
We are delighted to
#welcome
PRAGASSAM Anthony for a Fixed-term contract as an engineer in Galaxy component development until 2028-01-31. A
#collaboration
with Valentin Loux. More information at
maiage.inrae.fr/node/3428
.
26 days ago
0
1
1
We are
#hiring
a Stage for a 6 mois period on Exploration of the pangenome to automatically delineate ICE and IME mobile elements, starting 2026-01-01. More information at
maiage.inrae.fr/node/3422
.
about 1 month ago
0
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We are
#hiring
a Stage for a 6 mois period on Detecting genomic modules across multiple pangenomes using MultiGraph Neural Network, starting 2026-01-01. More information at
maiage.inrae.fr/node/3421
.
about 1 month ago
0
1
1
We are delighted to
#welcome
BERNE Edmond for a CDD on "Holobionts data integration" until 2026-09-30. A
#collaboration
with Olivier Rué, Fabrice Legeai. More information at
maiage.inrae.fr/node/3417
.
about 1 month ago
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We are delighted to
#welcome
FERNANDEZ Émilie for a CDD on "Development of the Ferments du Futur data warehouse" until 2032-12-15. A
#collaboration
with Loux, V. More information at
maiage.inrae.fr/node/3416
.
about 1 month ago
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1
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Organisation of and participation in a workshop at Caltech, Pasadena, California, on the theme of ‘Multiscale modelling of ocular and cardiovascular systems’ from 29 September to 3 October 2025. At the American Institute of Mathematics. More information
aimath.org/workshops/up...
about 1 month ago
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We are
#hiring
a Stage for a 6 mois period on Development of workflows for pangenome graph functional annotation at large scale, starting 2026-01-05. More information at
maiage.inrae.fr/node/3413
.
about 1 month ago
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We are thrilled to be involved in the Statistics and machine learning predictive tools for transition toward sustainable agriculture: dynamic modeling and heterogeneous population
#project
. More information at
maiage.inrae.fr/node/3080
.
about 2 months ago
0
1
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We are delighted to
#welcome
MARINO Thomas for a Doctorant.e on Mfd profiling and dynamic reshaping until 2028-09-30. A
#collaboration
with Sylvain Martheyet Gwenaëlle André à MaIAGE Gwenaëlle ANDRE (70%) et Nalini Rama Rao (30%). More information at
maiage.inrae.fr/node/3405
.
2 months ago
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We are delighted to
#welcome
GUEDOUAR Sana for a CDD on Adaptation de l’application Genoscapist pour l’étude de l’hétérogénéité phénotypique et l’adaptation à l'hôte pendant la phase stationnaire chez les Firmicutes pathogènes sporulants until 2026-03-31. More:
maiage.inrae.fr/node/3404
.
2 months ago
0
0
0
We are delighted to
#welcome
VÉRON Joséphine for a CDD on Développement d'un système de culture en mini-bioréacteurs couplés pour limiter le développement de biofilms. until 2026-06-30. A
#collaboration
with GUÉRIN Cyprien/ More information at
maiage.inrae.fr/node/3398
.
2 months ago
0
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We are thrilled to be involved in the Plate-forme de CULTuromique partagée pour accéder à un large répertoire de mIcro-organismes, dont les non cultivéS, afin de comprendre les fonctions cléS des microbIoMes sur les écOsystèmes humains
#project
. More information at
maiage.inrae.fr/node/3397
.
2 months ago
1
1
0
We are delighted to
#welcome
LACOUR Geoffrey for a Post-doc on Modélisation mathématique et outils numériques pour l’analyse et la prédiction de consortia microbiens until 2026-10-31. A
#collaboration
with Beatrice Laroche, Lorenzo Sala. More information at
maiage.inrae.fr/node/3396
.
2 months ago
1
1
0
We are delighted to
#welcome
JOCHEL Jessy for a CDD on Gestionnaire d'unité until 2026-08-31. A
#collaboration
with Khadija El-Mourabit, Aurore Lenfant. More information at
maiage.inrae.fr/node/3395
.
2 months ago
0
1
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We are delighted to
#welcome
LAMY Oriane for a CDD on Apprentissage : Développement de méthodes pour la détection de flux de souches à partir de données métagénomiques shotgun et application aux écosystèmes vigne-vin. A
#collaboration
with AL Abraham, G Kon Kam King. More
maiage.inrae.fr/node/3394
.
3 months ago
0
1
1
We are delighted to
#welcome
YOUSSEF Meriem for a Doctorant.e on Modèles de langage à l'échelle des graphes de pangénomes pour la prédiction de fonctions biologiques until 2028-09-30. A
#collaboration
with Guillaume GAUTREAU Alexandra CALTEAU; David VALLENET. More
maiage.inrae.fr/node/3392
.
4 months ago
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0
We are thrilled to be involved in the Dietary Enteral Fibers in ENterobacteriaceae gut-colonized intenSIVE care patients
#project
. A great
#collaboration
with partners : CIIL (Univ. Lille); EPE (Univ. Lille); CHU Lille; MICALIS, persons : L. Sala; B. Laroche. More
maiage.inrae.fr/node/3060
.
4 months ago
1
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We are thrilled to be involved in the Determining the role of HYPHospheric bacteria in the Arbuscular mycorrhizal fungi-mediated nutrient supply and growth promotion of MAIZE under low-input agriculture
#project
. More information at
maiage.inrae.fr/node/3061
4 months ago
1
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We are thrilled to be involved in the "Determining the role of HYPHospheric bacteria in the Arbuscular mycorrhizal fungi-mediated nutrient supply and growth promotion of MAIZE under low-input agriculture"
#project
. Researchers involved: O. Rué, V. Loux, H. Chiapello. More
maiage.inrae.fr/node/3244
.
4 months ago
1
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We are thrilled to be involved in the HyphAMaize
#project
. A great
#collaboration
with: Institut Jean-Pierre BOURGIN, Laboratoire de recherche en sciences vegetales, Agronutrition SA, UNL (USA), INRAE GeT. More information at
maiage.inrae.fr/node/3244
. Image designed by Freepik.
4 months ago
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We are thrilled to be involved in the Robustness Assessment of LLM by designing evaluation metrics and by LLM experiments
#project
. A great
#collaboration
with Huazhong Agricultural University (HZAU), China. More information at
maiage.inrae.fr/node/3331
. Image designed by Freepik.
4 months ago
0
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Solène Pety will present at
#JOBIM2025
on 11 July at 10:10 am in Amphi D, discussing RITHMS: An advanced stochastic framework for simulating transgenerational hologenomic data.
#holobiont
#genotype
#microbiota
#simulationframework
@mahendram.bsky.social
4 months ago
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Meet Agnès Barnabé on July 9th at
#JOBIM2025
at the poster session to talk about SIDURI: from an integrative information system to a user-friendly portal for data analysis
#fermentsdufutur
@vloux.bsky.social
@sophieschbath.bsky.social
@inrae-migale.bsky.social
4 months ago
1
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Meet Hanin Ali on July 9th at
#JOBIM2025
at the poster session to talk about Bridging gene-level and sequence-level pangenome graph to explore microbial diversity
#INRAE
#MaIAGE
@guigau.bsky.social
#UniversiteLille
#CRIStAL
@camillemrcht.bsky.social
4 months ago
1
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L'unité MaIAGE via la plateforme
#bioinformatique
@inrae-migale.bsky.social
participera au
#JobFair
de
#JOBIM2025
Pensez à vous
#inscrire
via
forms.gle/rFPD8aGKRSrW...
pour participer aux
#echanges❗
add a skeleton here at some point
4 months ago
0
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Meet Christelle Hennequet-Antier on July 8th at
#JOBIM2025
at the poster session to talk about StatOmique: sharing experience on statistical analysis of omics data
statomique.github.io
#GDRBIMMM
#Statistique
#Omiquedata
4 months ago
0
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Meet Anne-Laure Abraham on July 8th at
#JOBIM2025
at the poster session to talk about Bacterial transfers in dairy systems under changing farming practices
#INRAE
#MaIAGE
#UMRF
#Holoflux
4 months ago
1
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Meet Hajar Bouamout on July 8th at
#JOBIM2025
at the poster session to talk about HoloOligoDB: an open platform for the exploration of milk oligosaccharides in mammalian species
#database
#webinterface
#oligosaccharide
@sandraderozier.bsky.social
@vloux.bsky.social
@inrae-migale.bsky.social
4 months ago
0
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Meet Sylvain Marthey on July 8th at
#JOBIM2025
for a demonstration about WHOOPER Web application for Hands-On identification of proteins co-Occurrence among Phyla, focused on user ERgonomics (Amphi D at 6 pm)
#webapplication
#proteins
#evolution
#datavisualization
#userergonomics
4 months ago
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🎉 Vendredi dernier, l'unité
#maiage
était en
#fete‼️
#barbecue
,
#tournoi
de
#tennisdetable
,
#cupcakechallenge
,
#animations
en tous genres pour fêter les
#10ans
de notre unité🎂 Un beau moment de
#partage‼️
4 months ago
0
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We are thrilled to be involved in the Deciphering plant-microbiota interactions to enhance crop defenses to pests
#project
. A great
#collaboration
with partners : INRAE, CNRSpersons : M. Mariadassou, S. Schbath. More information at
maiage.inrae.fr/node/1027
5 months ago
0
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We are
#hiring
a CDD for a 7 ans period on Ingénieur-e en développement de systèmes d'information, starting 2025-09-01. Application to Loux Valentin,
[email protected]
, Schbath Sophie,
[email protected]
by 2025-06-20. More information at
maiage.inrae.fr/node/3327
6 months ago
0
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Trainings of the “Cycle bioinformatique par la pratique” 2025 Tidyverse :
documents.migale.inrae.fr/posts/traini...
Python :
documents.migale.inrae.fr/posts/traini...
6 months ago
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Bravo aux auteurs et autrices pour cette publication majeure dans la lutte contre l'antibiorésistance ! Félicitations notamment à Samantha Samson et Gwenaëlle André dans notre unité pour leur analyse de la structure 3D de la protéine Mfd. 🔗 en savoir plus :
www.linkedin.com/posts/unite-...
7 months ago
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We are thrilled to be involved in the ECOMIC
#project
: ECOnomic framework for MICrobial resources. A great
#collaboration
with Pilier Microbien de RARe - 10 CRB: CIRM/CRBIP/SAMBO/CRB-FAN. More information at
maiage.inrae.fr/node/3310
. Image designed by Freepik.
7 months ago
1
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reposted by
Unité INRAE MaIAGE
LABGeM
8 months ago
We're offering a fully funded PhD to work on new methods for microbial
#pangenomics
using
#LLM
in collaboration with
@guigau.bsky.social
and Christophe Ambroise.
labgem.genoscope.cns.fr/2025/03/17/f...
Apply before April 27th.
@genoscopeumr.bsky.social
@cea-paris-saclay.bsky.social
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reposted by
Unité INRAE MaIAGE
Sophie Schbath
9 months ago
On recrute un-e bioinformatien-ne permanent-e dans l'équipe pour renforcer notre service d'analyse ! 🏡 Nous faisons partie de l'unité de recherche
@inrae-maiage.bsky.social
en Île-de-France. N'hésitez pas à me contacter ou
@vloux.bsky.social
si vous êtes intéressé-e
add a skeleton here at some point
0
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The INRAE MaIAGE unit has joined the
#bluesky
network! We extend a warm welcome to all those who join us. Don't hesitate to follow us on our other platforms too:
linktr.ee/INRAE.MaIAGE
🙂
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Unité INRAE Mathématiques et Informatique Appliquées du Génome à l'Environnement
https://linktr.ee/INRAE.MaIAGE
9 months ago
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L'unité INRAE MaIAGE fait son apparition sur le réseau
#bluesky
! Nous souhaitons la bienvenue à celles et ceux qui nous rejoignent. N'hésitez pas à nous suivre également sur nos autres plateformes :
linktr.ee/INRAE.MaIAGE
🙂
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INRAE MaIAGE | Linktree
Unité INRAE Mathématiques et Informatique Appliquées du Génome à l'Environnement
https://linktr.ee/INRAE.MaIAGE
9 months ago
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