Gisela Gabernet
@ggabernet.bsky.social
π€ 346
π₯ 751
π 6
Computational Immunologist @Yale School of Medicine
Join us for the Immcantation Users meeting this Thursday, featuring interesting talks on scientific projects including BCR and TCR data analysis using Immcantation! It's not too late to register βοΈ
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24 days ago
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Do you want to share your research using Immcantation? Abstract submission for the Immcantation Users Meeting 2026 is now open until October 1st!
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5 months ago
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Interested in analyzing BCR / TCR single-cell or bulk datasets? Join the hands-on training on using nf-core/airrflow, a Nextflow pipeline to process start-to-finish AIRRseq data using the Immcantation framework. π June 12th 10-11:30 ET π» Virtual πΈ It's free! Registration:
nf-co.re/events/2025/...
9 months ago
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At
#AAI2025
and interested in high-throughput BCR/TCR single cell and bulk data analysis? Come talk to me at poster #408 from 14:15 to 15:30! Iβll be presenting nf-core/airrflow, a Nextflow workflow using the Immcantation framework
@immcantation.bsky.social
@nf-co.re
10 months ago
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reposted by
Gisela Gabernet
HIPC
10 months ago
Coming to
@aai.org
in Honolulu? π΄π¬ Join
#symposium
May 6 at 8:30 a.m. Also booths #535 #537, shared with
@iedb.bsky.social
@airr-community.bsky.social
#AAI2025
Speakers include
@settelab.bsky.social
@lungdrc.bsky.social
@victoriazyulina.bsky.social
immunology2025.aai.org/guest-sympos...
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Do you analyze large BCR and TCR sequencing datasets? Answer our survey for improving nf-core/airrflow, a Nextflow pipeline to analyze bulk and single-cell AIRRseq data (
doi.org/10.1371/jour...
). Weβre interested in your opinion on useful new features!
yalesurvey.ca1.qualtrics.com/jfe/form/SV_...
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nf-core/airrflow: An adaptive immune receptor repertoire analysis workflow employing the Immcantation framework
Author summary We have created nf-core/airrflow, a workflow to help researchers study the immune system in healthy and disease states, such as infections, autoimmunity, and cancer. The adaptive immune...
https://doi.org/10.1371/journal.pcbi.1012265
11 months ago
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reposted by
Gisela Gabernet
Marc Veldhoen
about 1 year ago
Persistence of spike protein at the skull-meninges-brain axis may contribute to the neurological sequelae of COVID-19 Some unrest and abuse about this paper- Parts of the pre-print have been abused previously. What does it show?
www.cell.com/cell-ho...
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reposted by
Gisela Gabernet
Dr Steven White
about 1 year ago
Impressive!
www.nature.com/articles/d41...
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This malaria vaccine is delivered by a mosquito bite
Bites from insects infected with modified malaria parasites boosted immunity and stopped people from contracting the disease.
https://www.nature.com/articles/d41586-024-03817-0
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reposted by
Gisela Gabernet
Itai Yanai
over 1 year ago
Doing good science is 90% finding a science buddy to constantly talk to about the project.
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reposted by
Gisela Gabernet
Jamie Heather
about 1 year ago
Inspired by
@rodrahimi.bsky.social
's noble efforts linking immunologists together over here, let's try and get more specifically TCR/BCR/AIRR/repertoire chat going with this starter park
go.bsky.app/Gi2dcGd
Drop me a beep to get added or suggest others!
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