Gisela Gabernet
@ggabernet.bsky.social
π€ 336
π₯ 751
π 5
Computational Immunologist @Yale School of Medicine
Do you want to share your research using Immcantation? Abstract submission for the Immcantation Users Meeting 2026 is now open until October 1st!
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21 days ago
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Interested in analyzing BCR / TCR single-cell or bulk datasets? Join the hands-on training on using nf-core/airrflow, a Nextflow pipeline to process start-to-finish AIRRseq data using the Immcantation framework. π June 12th 10-11:30 ET π» Virtual πΈ It's free! Registration:
nf-co.re/events/2025/...
4 months ago
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At
#AAI2025
and interested in high-throughput BCR/TCR single cell and bulk data analysis? Come talk to me at poster #408 from 14:15 to 15:30! Iβll be presenting nf-core/airrflow, a Nextflow workflow using the Immcantation framework
@immcantation.bsky.social
@nf-co.re
5 months ago
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Gisela Gabernet
HIPC
5 months ago
Coming to
@aai.org
in Honolulu? π΄π¬ Join
#symposium
May 6 at 8:30 a.m. Also booths #535 #537, shared with
@iedb.bsky.social
@airr-community.bsky.social
#AAI2025
Speakers include
@settelab.bsky.social
@lungdrc.bsky.social
@victoriazyulina.bsky.social
immunology2025.aai.org/guest-sympos...
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Do you analyze large BCR and TCR sequencing datasets? Answer our survey for improving nf-core/airrflow, a Nextflow pipeline to analyze bulk and single-cell AIRRseq data (
doi.org/10.1371/jour...
). Weβre interested in your opinion on useful new features!
yalesurvey.ca1.qualtrics.com/jfe/form/SV_...
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nf-core/airrflow: An adaptive immune receptor repertoire analysis workflow employing the Immcantation framework
Author summary We have created nf-core/airrflow, a workflow to help researchers study the immune system in healthy and disease states, such as infections, autoimmunity, and cancer. The adaptive immune...
https://doi.org/10.1371/journal.pcbi.1012265
6 months ago
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reposted by
Gisela Gabernet
Marc Veldhoen
10 months ago
Persistence of spike protein at the skull-meninges-brain axis may contribute to the neurological sequelae of COVID-19 Some unrest and abuse about this paper- Parts of the pre-print have been abused previously. What does it show?
www.cell.com/cell-ho...
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reposted by
Gisela Gabernet
Dr Steven White
10 months ago
Impressive!
www.nature.com/articles/d41...
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This malaria vaccine is delivered by a mosquito bite
Bites from insects infected with modified malaria parasites boosted immunity and stopped people from contracting the disease.
https://www.nature.com/articles/d41586-024-03817-0
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reposted by
Gisela Gabernet
Itai Yanai
11 months ago
Doing good science is 90% finding a science buddy to constantly talk to about the project.
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reposted by
Gisela Gabernet
Jamie Heather
11 months ago
Inspired by
@rodrahimi.bsky.social
's noble efforts linking immunologists together over here, let's try and get more specifically TCR/BCR/AIRR/repertoire chat going with this starter park
go.bsky.app/Gi2dcGd
Drop me a beep to get added or suggest others!
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