Pipeline release! nf-core/mag v5.2.0 - mag 5.2.0 - Puce Pangolin! Please see the changelog: https://github.com/nf-core/mag/releases/tag/5.2.0

Pipeline release! nf-core/viralmetagenome v1.0.0 - Willowish Hawk! Please see the changelog: github.com/nf-core/vira...

Pipeline release! nf-core/scrnaseq v4.1.0! Please see the changelog: github.com/nf-core/scrn...

Pipeline release! nf-core/viralrecon v3.0.0 - Waterdog Hibiscus! Please see the changelog: github.com/nf-core/vira...

Pipeline release! nf-core/molkart v1.2.0 - Cartography Castle! Please see the changelog: github.com/nf-core/molk...

Pipeline release! nf-core/reportho v1.1.0 - Reliable Rudder! Please see the changelog: github.com/nf-core/repo...

Pipeline release! nf-core/proteinfamilies v2.0.0 - Tin Shark! Please see the changelog: github.com/nf-core/prot...

Pipeline release! nf-core/pixelator v2.2.0 - nf-core/pixelator 2.2.0! Please see the changelog: https://github.com/nf-core/pixelator/releases/tag/2.2.0

Pipeline release! nf-core/demultiplex v1.7.0 - 1.7.0! Please see the changelog: https://github.com/nf-core/demultiplex/releases/tag/1.7.0

Pipeline release! nf-core/mag v5.1.0 - mag 5.1.0 - Platinum Pudu! Please see the changelog: https://github.com/nf-core/mag/releases/tag/5.1.0

Pipeline release! nf-core/sarek v3.6.1 - Sarek 3.6.1 - Sjnjierák! Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.6.1

Between September 22nd and 26th, the nf-core core team gathered in Stockholm to tackle the big questions facing our growing community.

New blog post! nf-core core team retreat - September 2025 https://nf-co.re/blog/2025/retreat-2025/

Pipeline release! nf-core/bacass v2.5.0 - nf-core/bacass v2.5.0! Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.5.0

New blog post! nf-core/tools - 3.4.0 https://nf-co.re/blog/2025/tools-3_4_0/

Last chance! Let's gooooo! 🚀

🧑🏾‍💻 Need help with #nfcore #nextflow ( #bioinformatics ) #pipelines, running or developing? 📅 We host regular helpdesks for different TZs! - 🌍 Eur/M.E./Afr: Thurs. @ 10:00-11:00 CEST (Today!) - 🌏 Asia-Pacific: Weds. @ 15:00 NZDT - 🌎 Americas: Tues. @ 14:00 ET Join the nf-core slack for details!

Pipeline release! nf-core/sarek v3.6.0 - Sarek 3.6.0 - Kvikkjokk! Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.6.0

Lots of great talks from the @nf-co.re community in the upcoming #NextflowSummit agenda! 🎉 Join the @nextflow.io community online at the end of October. Register for free now! 🎟 For even more #nf-core goodness, you can also sign up for the @nf-co.re hackathon in person in Barcelona right after 👩🏻‍💻

🧑🏾‍💻 Need help with #nfcore #nextflow ( #bioinformatics ) pipelines, running or developing? 📅 We host regular helpdesks for different TZs - 🌎 Americas: Tues. @ 14:00 ET (Today) - 🌍 Eur/M.E./Afr: Thurs. @ 10:00-11:00 CEST - 🌏 Asia-Pacific: Weds. @ 15:00 NZDT Join the nf-core slack for more details!

Pipeline release! nf-core/ampliseq v2.15.0 - Ampliseq Version 2.15.0! Please see the changelog: https://github.com/nf-core/ampliseq/releases/tag/2.15.0

Pipeline release! nf-core/funcscan v3.0.0 - v3.0.0 - French Chocolatine - 2025-10-04! Please see the changelog: https://github.com/nf-core/funcscan/releases/tag/3.0.0

Pipeline release! nf-core/mag v5.0.0 - mag 5.0.0 - Green Squirrel! Please see the changelog: https://github.com/nf-core/mag/releases/tag/5.0.0

📣 Last call 📣 👨🏾‍💻 Do you develop a #nextflow #pipeline for #metagenomics, #metataxonomics, #metatranscriptomics, #metaproteomics 🎉 Represent your pipeline at an upcoming community 'meta-omics' exhibition day by giving a tutorial! ✏️ Register your interest to demo your pipeline […]

🧖 Our helpdesk will be open again today at 10:00 CEST (09:00 BST), with nf-core maintainer's team member and module maestro Simon Pearce on-call to help you with anything #nfcore and #nextflow #pipelines!

Pipeline release! nf-core/proteinfamilies v1.3.1 - Gold Panda! Please see the changelog: https://github.com/nf-core/proteinfamilies/releases/tag/1.3.1

Pipeline release! nf-core/rnavar v1.2.1 - nf-core/rnavar 1.2.1 - Red Swordfish II! Please see the changelog: https://github.com/nf-core/rnavar/releases/tag/1.2.1

Don't leave it any later - come and join the @nf-co.re #hackathon in Barcelona! 🇪🇸 👩🏻‍💻 🍏 They're brilliant fun and a great way to meet people. There are still tickets left, but they're going fast.. 🎟

Time is running out to join the next @nf-co.re #hackathon in #Barcelona! 🇪🇸 Register below to join the fun 😀

Pipeline release! nf-core/rnafusion v4.0.0 - 4.0.0! Please see the changelog: https://github.com/nf-core/rnafusion/releases/tag/4.0.0

Pipeline release! nf-core/rnaseq v3.21.0 - nf-core/rnaseq v3.21.0 - Mercury Macaw! Please see the changelog: https://github.com/nf-core/rnaseq/releases/tag/3.21.0

Pipeline release! nf-core/pixelator v2.1.0 - nf-core/pixelator 2.1.0! Please see the changelog: https://github.com/nf-core/pixelator/releases/tag/2.1.0

Pipeline release! nf-core/pixelator v2.1.0 - nf-core/pixelator 2.1.0! Please see the changelog: https://github.com/nf-core/pixelator/releases/tag/2.1.0

❓ Do you develop a #nextflow pipeline for #metagenomics, #metataxonomics, #metatranscriptomics, #metaproteomics, etc? 🧑‍💻 I'm looking for #bioinformatics developers to give demos of their #opensource pipelines to the scientific community in a ‘Meta-*omics Nextflow pipeline community exhibition […]

🧑🏾‍💻 Need help with #nfcore #nextflow (#bioinformatics) pipelines, running or developing? Join our helpdesk! - 🌍 Eur/M.E./Afr: Thurs. @ 10:00-11:00 CEST (Today!) - 🌏 Asia-Pacific: Weds. @ 15:00 NZDT - 🌎 Americas: Tues. @ 14:00 ET See the nf-core slack and #weekly-helpdesk channel for more details!

New blog post! Maintainers Minutes: August 2025 https://nf-co.re/blog/2025/maintainers-minutes-2025-08-29/

There are still a few spots left for the Barcelona @nf-co.re hackathon! 🇪🇸🧑🏻‍💻👩🏼‍💻👨🏿‍💻🧑🏼‍💻👩🏽‍💻👨🏻‍💻💫 Grab your registration now before it's too late and join the fun 🤩

New blog post! Running nf-core pipelines on Google Colab https://nf-co.re/blog/2025/nf-core-colab-guide/

🧑🏾‍💻 Need help with #nfcore #nextflow (n #bioinformatics) pipelines? 📅 Our experts are back after the summer break for our weekly helpdesks! - 🌍 Eur/M.E./Afr: Thurs. @ 10:00-11:00 CEST - 🌏 Asia-Pacific: Weds. @ 15:00 NZDT - 🌎 Americas: Tues. @ 14:00 ET Join the nf-core slack for more details!

Pipeline release! nf-core/scnanoseq v1.2.1 - nf-core/scnanoseq v1.2.1 - Zinc Turtle! Please see the changelog: https://github.com/nf-core/scnanoseq/releases/tag/1.2.1

Pipeline release! nf-core/oncoanalyser v2.2.0 - 2.2.0 - Royal Spoonbill! Please see the changelog: https://github.com/nf-core/oncoanalyser/releases/tag/2.2.0

Pipeline release! nf-core/metatdenovo v1.3.0 - Release v. 1.3.0! Please see the changelog: https://github.com/nf-core/metatdenovo/releases/tag/1.3.0

Pipeline release! nf-core/taxprofiler v1.2.4 - v1.2.4 - Bouncy Basenji Patch! Please see the changelog: https://github.com/nf-core/taxprofiler/releases/tag/1.2.4

New blog post! Why are my pipeline download tests failing? https://nf-co.re/blog/2025/refurbushing-the-pipeline-download/

Pipeline release! nf-core/denovotranscript v1.2.1 - nf-core/denovotranscript v1.2.1! Please see the changelog: https://github.com/nf-core/denovotranscript/releases/tag/1.2.1

Pipeline release! nf-core/rnavar v1.2.0 - nf-core/rnavar 1.2.0 - Black Bebop! Please see the changelog: https://github.com/nf-core/rnavar/releases/tag/1.2.0

New blog post! Introducing nf-core Advisories https://nf-co.re/blog/2025/advisories/

Pipeline release! nf-core/pairgenomealign v2.2.1 - nf-core/pairgenomealign v2.2.1 – C’est quoi ça?! Please see the changelog: https://github.com/nf-core/pairgenomealign/releases/tag/2.2.1

📣 nf-core Hackathon – Project Submissions Now Open! 🚀 The in-person nf-core Hackathon in Barcelona this October is coming up fast, and we’re looking for your ideas! 🤩 Instructions below 👇

Pipeline release! nf-core/rnaseq v3.20.0 - nf-core/rnaseq v3.20.0 - Iridium Impala! Please see the changelog: https://github.com/nf-core/rnaseq/releases/tag/3.20.0