Pipeline release! nf-core/proteinfamilies v1.3.1 - Gold Panda! Please see the changelog: https://github.com/nf-core/proteinfamilies/releases/tag/1.3.1

Pipeline release! nf-core/rnavar v1.2.1 - nf-core/rnavar 1.2.1 - Red Swordfish II! Please see the changelog: https://github.com/nf-core/rnavar/releases/tag/1.2.1

Don't leave it any later - come and join the @nf-co.re #hackathon in Barcelona! 🇪🇸 👩🏻‍💻 🍏 They're brilliant fun and a great way to meet people. There are still tickets left, but they're going fast.. 🎟

Time is running out to join the next @nf-co.re #hackathon in #Barcelona! 🇪🇸 Register below to join the fun 😀

Pipeline release! nf-core/rnafusion v4.0.0 - 4.0.0! Please see the changelog: https://github.com/nf-core/rnafusion/releases/tag/4.0.0

Pipeline release! nf-core/rnaseq v3.21.0 - nf-core/rnaseq v3.21.0 - Mercury Macaw! Please see the changelog: https://github.com/nf-core/rnaseq/releases/tag/3.21.0

Pipeline release! nf-core/pixelator v2.1.0 - nf-core/pixelator 2.1.0! Please see the changelog: https://github.com/nf-core/pixelator/releases/tag/2.1.0

Pipeline release! nf-core/pixelator v2.1.0 - nf-core/pixelator 2.1.0! Please see the changelog: https://github.com/nf-core/pixelator/releases/tag/2.1.0

❓ Do you develop a #nextflow pipeline for #metagenomics, #metataxonomics, #metatranscriptomics, #metaproteomics, etc? 🧑‍💻 I'm looking for #bioinformatics developers to give demos of their #opensource pipelines to the scientific community in a ‘Meta-*omics Nextflow pipeline community exhibition […]

🧑🏾‍💻 Need help with #nfcore #nextflow (#bioinformatics) pipelines, running or developing? Join our helpdesk! - 🌍 Eur/M.E./Afr: Thurs. @ 10:00-11:00 CEST (Today!) - 🌏 Asia-Pacific: Weds. @ 15:00 NZDT - 🌎 Americas: Tues. @ 14:00 ET See the nf-core slack and #weekly-helpdesk channel for more details!

New blog post! Maintainers Minutes: August 2025 https://nf-co.re/blog/2025/maintainers-minutes-2025-08-29/

There are still a few spots left for the Barcelona @nf-co.re hackathon! 🇪🇸🧑🏻‍💻👩🏼‍💻👨🏿‍💻🧑🏼‍💻👩🏽‍💻👨🏻‍💻💫 Grab your registration now before it's too late and join the fun 🤩

New blog post! Running nf-core pipelines on Google Colab https://nf-co.re/blog/2025/nf-core-colab-guide/

🧑🏾‍💻 Need help with #nfcore #nextflow (n #bioinformatics) pipelines? 📅 Our experts are back after the summer break for our weekly helpdesks! - 🌍 Eur/M.E./Afr: Thurs. @ 10:00-11:00 CEST - 🌏 Asia-Pacific: Weds. @ 15:00 NZDT - 🌎 Americas: Tues. @ 14:00 ET Join the nf-core slack for more details!

Pipeline release! nf-core/scnanoseq v1.2.1 - nf-core/scnanoseq v1.2.1 - Zinc Turtle! Please see the changelog: https://github.com/nf-core/scnanoseq/releases/tag/1.2.1

Pipeline release! nf-core/oncoanalyser v2.2.0 - 2.2.0 - Royal Spoonbill! Please see the changelog: https://github.com/nf-core/oncoanalyser/releases/tag/2.2.0

Pipeline release! nf-core/metatdenovo v1.3.0 - Release v. 1.3.0! Please see the changelog: https://github.com/nf-core/metatdenovo/releases/tag/1.3.0

Pipeline release! nf-core/taxprofiler v1.2.4 - v1.2.4 - Bouncy Basenji Patch! Please see the changelog: https://github.com/nf-core/taxprofiler/releases/tag/1.2.4

New blog post! Why are my pipeline download tests failing? https://nf-co.re/blog/2025/refurbushing-the-pipeline-download/

Pipeline release! nf-core/denovotranscript v1.2.1 - nf-core/denovotranscript v1.2.1! Please see the changelog: https://github.com/nf-core/denovotranscript/releases/tag/1.2.1

Pipeline release! nf-core/rnavar v1.2.0 - nf-core/rnavar 1.2.0 - Black Bebop! Please see the changelog: https://github.com/nf-core/rnavar/releases/tag/1.2.0

New blog post! Introducing nf-core Advisories https://nf-co.re/blog/2025/advisories/

Pipeline release! nf-core/pairgenomealign v2.2.1 - nf-core/pairgenomealign v2.2.1 – C’est quoi ça?! Please see the changelog: https://github.com/nf-core/pairgenomealign/releases/tag/2.2.1

📣 nf-core Hackathon – Project Submissions Now Open! 🚀 The in-person nf-core Hackathon in Barcelona this October is coming up fast, and we’re looking for your ideas! 🤩 Instructions below 👇

Pipeline release! nf-core/rnaseq v3.20.0 - nf-core/rnaseq v3.20.0 - Iridium Impala! Please see the changelog: https://github.com/nf-core/rnaseq/releases/tag/3.20.0

Pipeline release! nf-core/rnavar v1.1.1 - nf-core/rnavar 1.1.1 - Brave Benatar! Please see the changelog: https://github.com/nf-core/rnavar/releases/tag/1.1.1

New blog post! Empowering bioinformatics communities with Nextflow and nf-core https://nf-co.re/blog/2025/paper-v2/

Pipeline release! nf-core/methylseq v4.1.0 - Burrows Stardust! Please see the changelog: https://github.com/nf-core/methylseq/releases/tag/4.1.0

Only one week left to submit your talk or poster abstract for the Virtual #NextflowSummit by @seqera.io 📅 hubs.la/Q03BKnVz0

Pipeline release! nf-core/detaxizer v1.2.0 - detaxizer 1.2.0 - Kunschd! Please see the changelog: https://github.com/nf-core/detaxizer/releases/tag/1.2.0

Grab your tickets for the October @nf-co.re hackathon in Barcelona! Spaces are filling up fast.. 🎟️ 🎟️ 🎟️ 🧑🏻‍💻👨🏿‍💻👩🏻‍💻🎉

Pipeline release! nf-core/proteinfamilies v1.3.0 - Nickel Spider! Please see the changelog: https://github.com/nf-core/proteinfamilies/releases/tag/1.3.0

Pipeline release! nf-core/variantbenchmarking v1.3.0 - Solitary Marquez! Please see the changelog: https://github.com/nf-core/variantbenchmarking/releases/tag/1.3.0

New blog post! Maintainers Minutes: July 2025 https://nf-co.re/blog/2025/maintainers-minutes-2025-07-31/

Pipeline release! nf-core/genomeassembler v1.1.0 - 1.1.0 - Aluminium Pigeon 'Brass Pigeon'! Please see the changelog: https://github.com/nf-core/genomeassembler/releases/tag/1.1.0

Let's go! Training and Hackathon in Barcelona, October 2025 🚀 Note that the Summit talks will be virtual / online this year, but the hackathon + training + posters (+ socials!!) remain in person 🤗 Get your hackathon / training tickets now - places are limited and are likely to sell out soon 🏃🏻‍♂️

🚀Join us in Barcelona on Oct 28-29! Registrations for the @nextflow.io Training and @nf-co.re Hackathon are now open! Get ready for two days of learning, hacking, and meaningful collaboration💻 🎟️ Tickets are 25% off until Aug 15. Register now: hubs.la/Q03xdBcK0

Pipeline release! nf-core/pairgenomealign v2.2.0 - nf-core/pairgenomealign v2.2.0 – Chagara ponzu! Please see the changelog: https://github.com/nf-core/pairgenomealign/releases/tag/2.2.0

New blog post! Meet the new meta.yml https://nf-co.re/blog/2025/modules-meta-yml/

Pipeline release! nf-core/methylseq v4.0.0 - Wallace Chrysalis! Please see the changelog: https://github.com/nf-core/methylseq/releases/tag/4.0.0

Pipeline release! nf-core/drugresponseeval v1.1.0 - Drugresponseeval 1.1.0 - Humongous Zapdos! Please see the changelog: https://github.com/nf-core/drugresponseeval/releases/tag/1.1.0

Pipeline release! nf-core/oncoanalyser v2.1.0 - 2.1.0 - Peruvian Pelican! Please see the changelog: https://github.com/nf-core/oncoanalyser/releases/tag/2.1.0

🧵6/10 To address these challenges, we introduce DrEval, a living benchmark for bias-free, reproducible, and application-oriented drug response prediction! ✨ We offer a standalone Python package, drevalpy, and an accompanying nf-core pipeline, drugresponseeval, for scalability. What did we find? 🕵️

🔁 Just out in Bioinformatics Advances: “nf-core/marsseq: Systematic preprocessing pipeline for MARS-seq experiments” Read the full paper here: https://doi.org/10.1093/bioadv/vbaf089 Authors include: @mproksik.bsky.social, @josh-brickman.bsky.social

Coming up next at #LPS25: Felix Kummer et al.: Standardizing Earth Observation Workflows with Nextflow and nf-core 
 📍11:30 at Hall L3 @kelewinska.bsky.social @hostertp.bsky.social

Our brand new pipeline can analyze genomes of any prokaryote or eukaryote including fungi, bacteria, oomycetes, nematodes, and/or insects mixed. It can analyze one to hundreds of mixed samples including populations and provide phylogenetic placement, taxon id known/unknown and population MSN.

Pipeline release! nf-core/demo v1.0.2 - nf-core/demo 1.0.2 - Mostly Harmless! Please see the changelog: https://github.com/nf-core/demo/releases/tag/1.0.2

Pipeline release! nf-core/pathogensurveillance v1.0.0 - 1.0.0! Please see the changelog: https://github.com/nf-core/pathogensurveillance/releases/tag/1.0.0

Pipeline release! nf-core/raredisease v2.6.0 - 2.6.0 - Cacofonix! Please see the changelog: https://github.com/nf-core/raredisease/releases/tag/2.6.0